RNA–Protein interactions for RNA: ENST00000527745.3

FGFR1-232, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 790 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-232ENST00000527745 POGZQ7Z3K3 1410 aa11.6□□□□□ -0.55
FGFR1-232ENST00000527745 TROQ12816 1431 aaPredicted RBP11.59□□□□□ -0.55
FGFR1-232ENST00000527745 CDK11AQ9UQ88 783 aaPredicted RBP11.58□□□□□ -0.56
FGFR1-232ENST00000527745 CLIP1P30622 1438 aa11.58□□□□□ -0.56
FGFR1-232ENST00000527745 YEATS2Q9ULM3 1422 aa11.58□□□□□ -0.56
FGFR1-232ENST00000527745 MAGI2Q86UL8 1455 aa11.57□□□□□ -0.56
FGFR1-232ENST00000527745 FER1L4A9Z1Z3 1794 aa11.57□□□□□ -0.56
FGFR1-232ENST00000527745 ARHGAP5Q13017 1502 aa11.57□□□□□ -0.56
FGFR1-232ENST00000527745 SCAPERQ9BY12 1400 aa11.57□□□□□ -0.56
FGFR1-232ENST00000527745 CCDC18Q5T9S5 1454 aa11.57□□□□□ -0.56
FGFR1-232ENST00000527745 CDC42BPBQ9Y5S2 1711 aa11.55□□□□□ -0.56
FGFR1-232ENST00000527745 PREX2Q70Z35 1606 aa11.55□□□□□ -0.56
FGFR1-232ENST00000527745 CASKIN1Q8WXD9 1431 aa11.54□□□□□ -0.56
FGFR1-232ENST00000527745 ZNF518AQ6AHZ1 1483 aa11.53□□□□□ -0.56
FGFR1-232ENST00000527745 FYCO1Q9BQS8 1478 aa11.53□□□□□ -0.56
FGFR1-232ENST00000527745 EFCAB2Q5VUJ9 269 aa11.53□□□□□ -0.56
FGFR1-232ENST00000527745 KDM5CP41229 1560 aa11.53□□□□□ -0.56
FGFR1-232ENST00000527745 CDC42BPAQ5VT25 1732 aa11.52□□□□□ -0.56
FGFR1-232ENST00000527745 ILDR1Q86SU0 546 aaPredicted RBP11.52□□□□□ -0.57
FGFR1-232ENST00000527745 ITSN2Q9NZM3 1697 aa11.52□□□□□ -0.57
FGFR1-232ENST00000527745 C9orf84Q5VXU9 1444 aa11.52□□□□□ -0.57
FGFR1-232ENST00000527745 LMTK3Q96Q04 1460 aa11.51□□□□□ -0.57
FGFR1-232ENST00000527745 ABCC1P33527 1531 aa11.51□□□□□ -0.57
FGFR1-232ENST00000527745 ATP10AO60312 1499 aa11.51□□□□□ -0.57
FGFR1-232ENST00000527745 ARHGEF12Q9NZN5 1544 aa11.5□□□□□ -0.57
FGFR1-232ENST00000527745 DIP2CQ9Y2E4 1556 aa11.5□□□□□ -0.57
FGFR1-232ENST00000527745 ABCA6Q8N139 1617 aa11.49□□□□□ -0.57
FGFR1-232ENST00000527745 MLECQ14165 292 aa11.49□□□□□ -0.57
FGFR1-232ENST00000527745 PLPPR3Q6T4P5 718 aa11.48□□□□□ -0.57
FGFR1-232ENST00000527745 REREQ9P2R6 1566 aa11.47□□□□□ -0.57
FGFR1-232ENST00000527745 AFAP1Q8N556 730 aa11.46□□□□□ -0.57
FGFR1-232ENST00000527745 PREX1Q8TCU6 1659 aa11.46□□□□□ -0.58
FGFR1-232ENST00000527745 MYT1LQ9UL68 1186 aa11.45□□□□□ -0.58
FGFR1-232ENST00000527745 KIDINS220Q9ULH0 1771 aa11.45□□□□□ -0.58
FGFR1-232ENST00000527745 SAMD9LQ8IVG5 1584 aa11.45□□□□□ -0.58
FGFR1-232ENST00000527745 MLH3Q9UHC1 1453 aa11.44□□□□□ -0.58
FGFR1-232ENST00000527745 TRAPPC8Q9Y2L5 1435 aa11.44□□□□□ -0.58
FGFR1-232ENST00000527745 SYCP2Q9BX26 1530 aa11.44□□□□□ -0.58
FGFR1-232ENST00000527745 C3P01024 1663 aa11.42□□□□□ -0.58
FGFR1-232ENST00000527745 AGLP35573 1532 aa11.41□□□□□ -0.58
FGFR1-232ENST00000527745 GPATCH8Q9UKJ3 1502 aaKnown RBP11.41□□□□□ -0.58
FGFR1-232ENST00000527745 HSPA2P54652 639 aa11.41□□□□□ -0.58
FGFR1-232ENST00000527745 EHBP1L1Q8N3D4 1523 aa11.4□□□□□ -0.59
FGFR1-232ENST00000527745 ZNF777Q9ULD5 760 aaPredicted RBP11.39□□□□□ -0.59
FGFR1-232ENST00000527745 MTUS2Q5JR59 1369 aa11.39□□□□□ -0.59
FGFR1-232ENST00000527745 SUPT6HQ7KZ85 1726 aaKnown RBP11.38□□□□□ -0.59
FGFR1-232ENST00000527745 TIAM1Q13009 1591 aa11.38□□□□□ -0.59
FGFR1-232ENST00000527745 INO80Q9ULG1 1556 aaPredicted RBP11.38□□□□□ -0.59
FGFR1-232ENST00000527745 CEP162Q5TB80 1403 aa11.38□□□□□ -0.59
FGFR1-232ENST00000527745 ATP7AQ04656 1500 aa11.38□□□□□ -0.59
FGFR1-232ENST00000527745 PLEKHH2Q8IVE3 1493 aa11.38□□□□□ -0.59
FGFR1-232ENST00000527745 SETD1BQ9UPS6 1966 aaKnown RBP11.37□□□□□ -0.59
FGFR1-232ENST00000527745 CCNB3Q8WWL7 1395 aa11.37□□□□□ -0.59
FGFR1-232ENST00000527745 UHRF1BP1Q6BDS2 1440 aa11.36□□□□□ -0.59
FGFR1-232ENST00000527745 CEBPAP49715 358 aaPredicted RBP11.36□□□□□ -0.59
FGFR1-232ENST00000527745 MROH2AA6NES4 1674 aa11.36□□□□□ -0.59
FGFR1-232ENST00000527745 KIAA1107Q9UPP5 1409 aa11.35□□□□□ -0.59
FGFR1-232ENST00000527745 FBXO41Q8TF61 875 aa11.35□□□□□ -0.59
FGFR1-232ENST00000527745 CFDP1Q9UEE9 299 aaPredicted RBP11.35□□□□□ -0.59
FGFR1-232ENST00000527745 PLXNC1O60486 1568 aa11.35□□□□□ -0.59
FGFR1-232ENST00000527745 STRCQ7RTU9 1775 aa11.35□□□□□ -0.59
FGFR1-232ENST00000527745 SPAG9O60271 1321 aaKnown RBP11.35□□□□□ -0.59
FGFR1-232ENST00000527745 ADGBQ8N7X0 1667 aa11.34□□□□□ -0.59
FGFR1-232ENST00000527745 HNRNPMP52272 730 aaKnown RBP eCLIP11.34□□□□□ -0.59
FGFR1-232ENST00000527745 ESF1Q9H501 851 aaKnown RBP11.34□□□□□ -0.59
FGFR1-232ENST00000527745 CNTLNQ9NXG0 1405 aa11.34□□□□□ -0.59
FGFR1-232ENST00000527745 CLTCQ00610 1675 aaKnown RBP11.33□□□□□ -0.6
FGFR1-232ENST00000527745 A2MP01023 1474 aa11.32□□□□□ -0.6
FGFR1-232ENST00000527745 NCOA2Q15596 1464 aa11.3□□□□□ -0.6
FGFR1-232ENST00000527745 MBD5Q9P267 1494 aa11.29□□□□□ -0.6
FGFR1-232ENST00000527745 MYO3AQ8NEV4 1616 aa11.28□□□□□ -0.6
FGFR1-232ENST00000527745 CAMSAP2Q08AD1 1489 aa11.28□□□□□ -0.6
FGFR1-232ENST00000527745 ZNF644Q9H582 1327 aaPredicted RBP11.28□□□□□ -0.6
FGFR1-232ENST00000527745 NPATQ14207 1427 aa11.27□□□□□ -0.6
FGFR1-232ENST00000527745 ZNF142P52746 1687 aaPredicted RBP11.27□□□□□ -0.6
FGFR1-232ENST00000527745 CCDC141Q6ZP82 1450 aa11.27□□□□□ -0.6
FGFR1-232ENST00000527745 VPS8Q8N3P4 1428 aa11.26□□□□□ -0.61
FGFR1-232ENST00000527745 ZMYM3Q14202 1370 aa11.26□□□□□ -0.61
FGFR1-232ENST00000527745 CAMSAP1Q5T5Y3 1602 aa11.25□□□□□ -0.61
FGFR1-232ENST00000527745 CERKQ8TCT0 537 aa11.25□□□□□ -0.61
FGFR1-232ENST00000527745 DMRT2Q9Y5R5 561 aa11.25□□□□□ -0.61
FGFR1-232ENST00000527745 RTEL1-TNFRSF6BF6WH68 1400 aa11.25□□□□□ -0.61
FGFR1-232ENST00000527745 NCOA1Q15788 1441 aa11.25□□□□□ -0.61
FGFR1-232ENST00000527745 LRRC9Q6ZRR7 1453 aa11.24□□□□□ -0.61
FGFR1-232ENST00000527745 ARHGEF5Q12774 1597 aa11.24□□□□□ -0.61
FGFR1-232ENST00000527745 CEP170BQ9Y4F5 1589 aaPredicted RBP11.24□□□□□ -0.61
FGFR1-232ENST00000527745 GGT6Q6P531 493 aa11.23□□□□□ -0.61
FGFR1-232ENST00000527745 PTPRTO14522 1441 aa11.23□□□□□ -0.61
FGFR1-232ENST00000527745 PTPRKQ15262 1439 aa11.22□□□□□ -0.61
FGFR1-232ENST00000527745 KDM5DQ9BY66 1539 aa11.21□□□□□ -0.61
FGFR1-232ENST00000527745 FAM135AQ9P2D6 1515 aa11.21□□□□□ -0.61
FGFR1-232ENST00000527745 LOC105371045A0A1W2PR82 267 aa11.21□□□□□ -0.61
FGFR1-232ENST00000527745 DHX29Q7Z478 1369 aaKnown RBP11.2□□□□□ -0.62
FGFR1-232ENST00000527745 MAP3K1Q13233 1512 aa11.19□□□□□ -0.62
FGFR1-232ENST00000527745 PPP6R1Q9UPN7 881 aa11.19□□□□□ -0.62
FGFR1-232ENST00000527745 LTBP4Q8N2S1 1624 aa11.19□□□□□ -0.62
FGFR1-232ENST00000527745 MAST1Q9Y2H9 1570 aa11.19□□□□□ -0.62
FGFR1-232ENST00000527745 PLA2R1Q13018 1463 aa11.19□□□□□ -0.62
FGFR1-232ENST00000527745 RSPH4AQ5TD94 716 aa11.18□□□□□ -0.62
FGFR1-232ENST00000527745 POLR1AO95602 1720 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms