RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 CCDC82Q8N4S0 544 aa10.18□□□□□ -0.78
NXF1-205ENST00000527497 EFCAB3Q8N7B9 438 aa10.18□□□□□ -0.78
NXF1-205ENST00000527497 AKT1S1Q96B36 256 aa10.18□□□□□ -0.78
NXF1-205ENST00000527497 PHF8Q9UPP1 1060 aa10.18□□□□□ -0.78
NXF1-205ENST00000527497 PLEKHG3A1L390 1219 aa10.16□□□□□ -0.78
NXF1-205ENST00000527497 TSPYL2Q9H2G4 693 aaPredicted RBP10.16□□□□□ -0.78
NXF1-205ENST00000527497 TRAK2O60296 914 aa10.15□□□□□ -0.78
NXF1-205ENST00000527497 ONECUT3O60422 494 aaPredicted RBP10.14□□□□□ -0.79
NXF1-205ENST00000527497 GOPCQ9HD26 462 aa10.14□□□□□ -0.79
NXF1-205ENST00000527497 CABP2Q9NPB3 220 aa10.12□□□□□ -0.79
NXF1-205ENST00000527497 MINK1Q8N4C8 1332 aaPredicted RBP10.11□□□□□ -0.79
NXF1-205ENST00000527497 KCTD17Q8N5Z5 321 aa10.11□□□□□ -0.79
NXF1-205ENST00000527497 TRAIPQ9BWF2 469 aa10.11□□□□□ -0.79
NXF1-205ENST00000527497 AMHR2Q16671 573 aa10.09□□□□□ -0.79
NXF1-205ENST00000527497 SPDYE16A6NNV3 312 aaPredicted RBP10.08□□□□□ -0.8
NXF1-205ENST00000527497 GPR37O15354 613 aa10.08□□□□□ -0.8
NXF1-205ENST00000527497 CLUAP1Q96AJ1 413 aa10.08□□□□□ -0.8
NXF1-205ENST00000527497 RBM42Q9BTD8 480 aaKnown RBP10.08□□□□□ -0.8
NXF1-205ENST00000527497 MAP2K5Q13163 448 aa10.06□□□□□ -0.8
NXF1-205ENST00000527497 PARP9Q8IXQ6 854 aa10.05□□□□□ -0.8
NXF1-205ENST00000527497 REM2Q8IYK8 340 aaPredicted RBP10.05□□□□□ -0.8
NXF1-205ENST00000527497 CCDC102AQ96A19 550 aa10.05□□□□□ -0.8
NXF1-205ENST00000527497 CCDC61Q9Y6R9 512 aa10.05□□□□□ -0.8
NXF1-205ENST00000527497 PDIA6Q15084 440 aa10.03□□□□□ -0.8
NXF1-205ENST00000527497 PCMTD1Q96MG8 357 aaPredicted RBP10.03□□□□□ -0.8
NXF1-205ENST00000527497 IRF6O14896 467 aa10.02□□□□□ -0.81
NXF1-205ENST00000527497 MS4A4AQ96JQ5 239 aa10.02□□□□□ -0.81
NXF1-205ENST00000527497 SERPINA10Q9UK55 444 aa10.02□□□□□ -0.81
NXF1-205ENST00000527497 PPP1R15BQ5SWA1 713 aa10.01□□□□□ -0.81
NXF1-205ENST00000527497 IFNL1Q8IU54 200 aa10.01□□□□□ -0.81
NXF1-205ENST00000527497 RAD21O60216 631 aa10□□□□□ -0.81
NXF1-205ENST00000527497 MCM6Q14566 821 aa10□□□□□ -0.81
NXF1-205ENST00000527497 CCDC97Q96F63 343 aaPredicted RBP10□□□□□ -0.81
NXF1-205ENST00000527497 DPYSL4O14531 572 aa9.99□□□□□ -0.81
NXF1-205ENST00000527497 PROSER2Q86WR7 435 aaPredicted RBP9.99□□□□□ -0.81
NXF1-205ENST00000527497 AEBP1Q8IUX7 1158 aa9.96□□□□□ -0.82
NXF1-205ENST00000527497 ZNF777Q9ULD5 760 aaPredicted RBP9.96□□□□□ -0.82
NXF1-205ENST00000527497 TTLL12Q14166 644 aaPredicted RBP9.95□□□□□ -0.82
NXF1-205ENST00000527497 RGS22Q8NE09 1264 aa9.95□□□□□ -0.82
NXF1-205ENST00000527497 GNPATO15228 680 aa9.94□□□□□ -0.82
NXF1-205ENST00000527497 TMCO4Q5TGY1 634 aa9.94□□□□□ -0.82
NXF1-205ENST00000527497 GPHNQ9NQX3 736 aaPredicted RBP9.94□□□□□ -0.82
NXF1-205ENST00000527497 EMILIN3Q9NT22 766 aa9.94□□□□□ -0.82
NXF1-205ENST00000527497 NUTM2FA1L443 756 aa9.93□□□□□ -0.82
NXF1-205ENST00000527497 FARP1Q9Y4F1 1045 aaPredicted RBP9.93□□□□□ -0.82
NXF1-205ENST00000527497 PITPNM1O00562 1244 aa9.92□□□□□ -0.82
NXF1-205ENST00000527497 SH3D19Q5HYK7 790 aa9.92□□□□□ -0.82
NXF1-205ENST00000527497 FNBP4Q8N3X1 1017 aaPredicted RBP9.92□□□□□ -0.82
NXF1-205ENST00000527497 HIC1Q14526 733 aa9.91□□□□□ -0.82
NXF1-205ENST00000527497 MAP3K13O43283 966 aa9.9□□□□□ -0.82
NXF1-205ENST00000527497 GIGYF2Q6Y7W6 1299 aaKnown RBP9.89□□□□□ -0.83
NXF1-205ENST00000527497 PAK3O75914 559 aaPredicted RBP9.88□□□□□ -0.83
NXF1-205ENST00000527497 FCHSD2O94868 740 aa9.88□□□□□ -0.83
NXF1-205ENST00000527497 CHADLQ6NUI6 762 aa9.88□□□□□ -0.83
NXF1-205ENST00000527497 KIF12Q96FN5 646 aa9.88□□□□□ -0.83
NXF1-205ENST00000527497 MS4A1P11836 297 aa9.87□□□□□ -0.83
NXF1-205ENST00000527497 MFAP1P55081 439 aaKnown RBP9.87□□□□□ -0.83
NXF1-205ENST00000527497 GOLGA2Q08379 1002 aa9.87□□□□□ -0.83
NXF1-205ENST00000527497 RETREG2Q8NC44 543 aa9.87□□□□□ -0.83
NXF1-205ENST00000527497 MTMR7Q9Y216 660 aa9.87□□□□□ -0.83
NXF1-205ENST00000527497 GRXCR2A6NFK2 248 aa9.85□□□□□ -0.83
NXF1-205ENST00000527497 GZF1Q9H116 711 aaPredicted RBP9.85□□□□□ -0.83
NXF1-205ENST00000527497 PLSCR2Q9NRY7 297 aa9.85□□□□□ -0.83
NXF1-205ENST00000527497 POM121Q96HA1 1249 aa9.84□□□□□ -0.83
NXF1-205ENST00000527497 PDE4CQ08493 712 aa9.83□□□□□ -0.84
NXF1-205ENST00000527497 DSG2Q14126 1118 aa9.83□□□□□ -0.84
NXF1-205ENST00000527497 SKIV2LQ15477 1246 aaKnown RBP9.83□□□□□ -0.84
NXF1-205ENST00000527497 FECHP22830 423 aa9.82□□□□□ -0.84
NXF1-205ENST00000527497 OXER1Q8TDS5 423 aa9.82□□□□□ -0.84
NXF1-205ENST00000527497 LOC105371045A0A1W2PR82 267 aa9.81□□□□□ -0.84
NXF1-205ENST00000527497 SPDYE5A6NIY4 337 aa9.81□□□□□ -0.84
NXF1-205ENST00000527497 PATL2C9JE40 543 aaKnown RBP9.81□□□□□ -0.84
NXF1-205ENST00000527497 PPP1R15AO75807 674 aaPredicted RBP9.81□□□□□ -0.84
NXF1-205ENST00000527497 OSBPP22059 807 aa9.8□□□□□ -0.84
NXF1-205ENST00000527497 IRF5Q13568 498 aa9.8□□□□□ -0.84
NXF1-205ENST00000527497 RBM25P49756 843 aaKnown RBP9.79□□□□□ -0.84
NXF1-205ENST00000527497 FOXK1P85037 733 aa9.79□□□□□ -0.84
NXF1-205ENST00000527497 FBXW7Q969H0 707 aa9.78□□□□□ -0.84
NXF1-205ENST00000527497 REPIN1Q9BWE0 567 aaKnown RBP9.78□□□□□ -0.84
NXF1-205ENST00000527497 COG6Q9Y2V7 657 aa9.78□□□□□ -0.84
NXF1-205ENST00000527497 CLCN1P35523 988 aa9.77□□□□□ -0.85
NXF1-205ENST00000527497 ZNF330Q9Y3S2 320 aaPredicted RBP9.77□□□□□ -0.85
NXF1-205ENST00000527497 SHROOM4Q9ULL8 1493 aa9.77□□□□□ -0.85
NXF1-205ENST00000527497 FOXD4L5Q5VV16 416 aaPredicted RBP9.76□□□□□ -0.85
NXF1-205ENST00000527497 TMC2Q8TDI7 906 aa9.76□□□□□ -0.85
NXF1-205ENST00000527497 FOXD4L4Q8WXT5 416 aaPredicted RBP9.76□□□□□ -0.85
NXF1-205ENST00000527497 TMUB1Q9BVT8 246 aa9.76□□□□□ -0.85
NXF1-205ENST00000527497 IGSF3O75054 1194 aa9.75□□□□□ -0.85
NXF1-205ENST00000527497 MAP3K9P80192 1104 aa9.75□□□□□ -0.85
NXF1-205ENST00000527497 ACIN1Q9UKV3 1341 aaKnown RBP9.75□□□□□ -0.85
NXF1-205ENST00000527497 PTGER2P43116 358 aa9.74□□□□□ -0.85
NXF1-205ENST00000527497 BANK1Q8NDB2 785 aa9.74□□□□□ -0.85
NXF1-205ENST00000527497 TMEM106CQ9BVX2 250 aa9.74□□□□□ -0.85
NXF1-205ENST00000527497 ATP1B4Q9UN42 357 aaPredicted RBP9.74□□□□□ -0.85
NXF1-205ENST00000527497 PTGDRQ13258 359 aa9.73□□□□□ -0.85
NXF1-205ENST00000527497 GPCPD1Q9NPB8 672 aa9.73□□□□□ -0.85
NXF1-205ENST00000527497 E9PSI1 815 aa9.72□□□□□ -0.85
NXF1-205ENST00000527497 ILDR1Q86SU0 546 aaPredicted RBP9.71□□□□□ -0.86
NXF1-205ENST00000527497 PLPP6Q8IY26 295 aa9.71□□□□□ -0.86
NXF1-205ENST00000527497 PROCA1Q8NCQ7 364 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms