RNA–Protein interactions for RNA: ENST00000527345.1

AP002428.1-201, humanhuman

TSL 3 BASIC

Gene AP002428.1, Length 380 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002428.1-201ENST00000527345 HOXB3P14651 431 aaPredicted RBP11.17□□□□□ -0.62
AP002428.1-201ENST00000527345 DOK7Q18PE1 504 aa11.17□□□□□ -0.62
AP002428.1-201ENST00000527345 ZNF710Q8N1W2 664 aa11.15□□□□□ -0.62
AP002428.1-201ENST00000527345 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.15□□□□□ -0.62
AP002428.1-201ENST00000527345 PCDH10Q9P2E7 1040 aa11.15□□□□□ -0.62
AP002428.1-201ENST00000527345 BBXQ8WY36 941 aaPredicted RBP11.14□□□□□ -0.63
AP002428.1-201ENST00000527345 RIMBP2O15034 1052 aa11.13□□□□□ -0.63
AP002428.1-201ENST00000527345 MARVELD3Q96A59 401 aa11.13□□□□□ -0.63
AP002428.1-201ENST00000527345 C2orf72A6NCS6 295 aa11.12□□□□□ -0.63
AP002428.1-201ENST00000527345 KIF3CO14782 793 aa11.12□□□□□ -0.63
AP002428.1-201ENST00000527345 TMC2Q8TDI7 906 aa11.12□□□□□ -0.63
AP002428.1-201ENST00000527345 GTPBP6O43824 516 aaPredicted RBP11.1□□□□□ -0.63
AP002428.1-201ENST00000527345 EMP3P54852 163 aa11.09□□□□□ -0.63
AP002428.1-201ENST00000527345 HOXB1P14653 301 aaPredicted RBP11.08□□□□□ -0.64
AP002428.1-201ENST00000527345 ZSWIM6Q9HCJ5 1215 aa11.08□□□□□ -0.64
AP002428.1-201ENST00000527345 CDAN1Q8IWY9 1227 aa11.06□□□□□ -0.64
AP002428.1-201ENST00000527345 SPRYD3Q8NCJ5 442 aa11.03□□□□□ -0.64
AP002428.1-201ENST00000527345 CFAP44Q96MT7 982 aa11.03□□□□□ -0.64
AP002428.1-201ENST00000527345 GPHNQ9NQX3 736 aaPredicted RBP11.03□□□□□ -0.64
AP002428.1-201ENST00000527345 FAM205CA6NFA0 338 aa11.02□□□□□ -0.65
AP002428.1-201ENST00000527345 GPR153Q6NV75 609 aa11.02□□□□□ -0.65
AP002428.1-201ENST00000527345 PAXIP1Q6ZW49 1069 aaPredicted RBP11.01□□□□□ -0.65
AP002428.1-201ENST00000527345 ARSIQ5FYB1 569 aa11□□□□□ -0.65
AP002428.1-201ENST00000527345 FOXK1P85037 733 aa10.99□□□□□ -0.65
AP002428.1-201ENST00000527345 HS3ST6Q96QI5 342 aa10.99□□□□□ -0.65
AP002428.1-201ENST00000527345 SLC34A2O95436 690 aa10.98□□□□□ -0.65
AP002428.1-201ENST00000527345 ERBB3P21860 1342 aa10.98□□□□□ -0.65
AP002428.1-201ENST00000527345 PLPP6Q8IY26 295 aa10.97□□□□□ -0.65
AP002428.1-201ENST00000527345 POTEB3A0JP26 581 aa10.96□□□□□ -0.65
AP002428.1-201ENST00000527345 POTEBQ6S5H4 581 aa10.96□□□□□ -0.65
AP002428.1-201ENST00000527345 PDE4AP27815 886 aa10.95□□□□□ -0.66
AP002428.1-201ENST00000527345 DSG2Q14126 1118 aa10.95□□□□□ -0.66
AP002428.1-201ENST00000527345 CRISPLD2Q9H0B8 497 aa10.94□□□□□ -0.66
AP002428.1-201ENST00000527345 KHSRPQ92945 711 aaKnown RBP eCLIP10.93□□□□□ -0.66
AP002428.1-201ENST00000527345 PCDHGA4Q9Y5G9 962 aa10.93□□□□□ -0.66
AP002428.1-201ENST00000527345 VARS2Q5ST30 1063 aaKnown RBP10.91□□□□□ -0.66
AP002428.1-201ENST00000527345 NCKAP5LQ9HCH0 1330 aa10.9□□□□□ -0.66
AP002428.1-201ENST00000527345 NUDT7P0C024 238 aa10.89□□□□□ -0.67
AP002428.1-201ENST00000527345 PTCD2Q8WV60 388 aaKnown RBP10.89□□□□□ -0.67
AP002428.1-201ENST00000527345 ZNF316A6NFI3 1004 aaPredicted RBP10.88□□□□□ -0.67
AP002428.1-201ENST00000527345 PPP1R15BQ5SWA1 713 aa10.88□□□□□ -0.67
AP002428.1-201ENST00000527345 LARP6Q9BRS8 491 aaKnown RBP10.88□□□□□ -0.67
AP002428.1-201ENST00000527345 TBC1D12O60347 775 aa10.87□□□□□ -0.67
AP002428.1-201ENST00000527345 PLCB2Q00722 1185 aa10.85□□□□□ -0.67
AP002428.1-201ENST00000527345 CADPS2Q86UW7 1296 aa10.84□□□□□ -0.67
AP002428.1-201ENST00000527345 ZNF687Q8N1G0 1237 aa10.84□□□□□ -0.67
AP002428.1-201ENST00000527345 DDX27Q96GQ7 796 aaKnown RBP10.84□□□□□ -0.67
AP002428.1-201ENST00000527345 KRTAP3-3Q9BYR6 98 aa10.83□□□□□ -0.68
AP002428.1-201ENST00000527345 KRTAP3-2Q9BYR7 98 aa10.83□□□□□ -0.68
AP002428.1-201ENST00000527345 LHX6Q9UPM6 363 aa10.83□□□□□ -0.68
AP002428.1-201ENST00000527345 MFSD10Q14728 455 aa10.81□□□□□ -0.68
AP002428.1-201ENST00000527345 OXER1Q8TDS5 423 aa10.81□□□□□ -0.68
AP002428.1-201ENST00000527345 KDM4FA0A1W2PPD8 638 aa10.8□□□□□ -0.68
AP002428.1-201ENST00000527345 UPF1Q92900 1129 aaKnown RBP eCLIP10.8□□□□□ -0.68
AP002428.1-201ENST00000527345 HAP1P54257 671 aaPredicted RBP10.78□□□□□ -0.68
AP002428.1-201ENST00000527345 SPNS2Q8IVW8 549 aa10.78□□□□□ -0.68
AP002428.1-201ENST00000527345 PSDA5PKW4 1024 aaPredicted RBP10.77□□□□□ -0.69
AP002428.1-201ENST00000527345 TSHZ2Q9NRE2 1034 aa10.73□□□□□ -0.69
AP002428.1-201ENST00000527345 MAP3K9P80192 1104 aa10.72□□□□□ -0.69
AP002428.1-201ENST00000527345 PBX2P40425 430 aa10.7□□□□□ -0.7
AP002428.1-201ENST00000527345 MMRN1Q13201 1228 aa10.7□□□□□ -0.7
AP002428.1-201ENST00000527345 EMILIN3Q9NT22 766 aa10.7□□□□□ -0.7
AP002428.1-201ENST00000527345 WDR70Q9NW82 654 aa10.7□□□□□ -0.7
AP002428.1-201ENST00000527345 EVI5O60447 810 aa10.68□□□□□ -0.7
AP002428.1-201ENST00000527345 PPP4R3BQ5MIZ7 849 aa10.68□□□□□ -0.7
AP002428.1-201ENST00000527345 ANO8Q9HCE9 1232 aaPredicted RBP10.68□□□□□ -0.7
AP002428.1-201ENST00000527345 CAMK2BQ13554 666 aa10.67□□□□□ -0.7
AP002428.1-201ENST00000527345 ANKRD13DQ6ZTN6 518 aa10.67□□□□□ -0.7
AP002428.1-201ENST00000527345 POTEEQ6S8J3 1075 aa10.66□□□□□ -0.7
AP002428.1-201ENST00000527345 AXIN2Q9Y2T1 843 aa10.66□□□□□ -0.7
AP002428.1-201ENST00000527345 ARHGAP33O14559 1287 aa10.65□□□□□ -0.7
AP002428.1-201ENST00000527345 LSM11P83369 360 aaKnown RBP eCLIP10.65□□□□□ -0.7
AP002428.1-201ENST00000527345 ZNF454Q8N9F8 522 aa10.63□□□□□ -0.71
AP002428.1-201ENST00000527345 FOSBP53539 338 aa10.61□□□□□ -0.71
AP002428.1-201ENST00000527345 DPYSL4O14531 572 aa10.59□□□□□ -0.71
AP002428.1-201ENST00000527345 E2F4Q16254 413 aa10.59□□□□□ -0.71
AP002428.1-201ENST00000527345 JPH4Q96JJ6 628 aa10.59□□□□□ -0.71
AP002428.1-201ENST00000527345 KCNH8Q96L42 1107 aa10.59□□□□□ -0.71
AP002428.1-201ENST00000527345 PTGER2P43116 358 aa10.58□□□□□ -0.72
AP002428.1-201ENST00000527345 PSEN2P49810 448 aa10.58□□□□□ -0.72
AP002428.1-201ENST00000527345 ZDHHC16Q969W1 377 aa10.56□□□□□ -0.72
AP002428.1-201ENST00000527345 BCL2L12Q9HB09 334 aa10.56□□□□□ -0.72
AP002428.1-201ENST00000527345 MYT1LQ9UL68 1186 aa10.56□□□□□ -0.72
AP002428.1-201ENST00000527345 DMRTA1Q5VZB9 504 aa10.55□□□□□ -0.72
AP002428.1-201ENST00000527345 KCNK17Q96T54 332 aa10.55□□□□□ -0.72
AP002428.1-201ENST00000527345 TK2O00142 265 aa10.54□□□□□ -0.72
AP002428.1-201ENST00000527345 ADGRD1Q6QNK2 874 aa10.54□□□□□ -0.72
AP002428.1-201ENST00000527345 VSIG10Q8N0Z9 540 aa10.54□□□□□ -0.72
AP002428.1-201ENST00000527345 PTPREP23469 700 aa10.53□□□□□ -0.72
AP002428.1-201ENST00000527345 RNF166Q96A37 237 aaPredicted RBP10.53□□□□□ -0.72
AP002428.1-201ENST00000527345 PCDHGA10Q9Y5H3 936 aa10.53□□□□□ -0.72
AP002428.1-201ENST00000527345 PHF14O94880 888 aa10.52□□□□□ -0.73
AP002428.1-201ENST00000527345 ADAM33Q9BZ11 813 aa10.52□□□□□ -0.73
AP002428.1-201ENST00000527345 ARIH1Q9Y4X5 557 aaPredicted RBP10.51□□□□□ -0.73
AP002428.1-201ENST00000527345 SPDYE16A6NNV3 312 aaPredicted RBP10.5□□□□□ -0.73
AP002428.1-201ENST00000527345 TYW1BQ6NUM6 668 aa10.5□□□□□ -0.73
AP002428.1-201ENST00000527345 FBXW7Q969H0 707 aa10.5□□□□□ -0.73
AP002428.1-201ENST00000527345 PDIA6Q15084 440 aa10.48□□□□□ -0.73
AP002428.1-201ENST00000527345 EPAS1Q99814 870 aa10.48□□□□□ -0.73
AP002428.1-201ENST00000527345 DDX12PQ92771 950 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms