RNA–Protein interactions for RNA: ENST00000527203.5

FGFR1-231, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-231ENST00000527203 PTPRMP28827 1452 aa18.83■□□□□ 0.6
FGFR1-231ENST00000527203 YEATS2Q9ULM3 1422 aa18.83■□□□□ 0.6
FGFR1-231ENST00000527203 PLCH2O75038 1416 aa18.81■□□□□ 0.6
FGFR1-231ENST00000527203 POGZQ7Z3K3 1410 aa18.79■□□□□ 0.6
FGFR1-231ENST00000527203 SCAPERQ9BY12 1400 aa18.79■□□□□ 0.6
FGFR1-231ENST00000527203 TROQ12816 1431 aaPredicted RBP18.78■□□□□ 0.6
FGFR1-231ENST00000527203 ARHGAP5Q13017 1502 aa18.78■□□□□ 0.6
FGFR1-231ENST00000527203 CDC42BPBQ9Y5S2 1711 aa18.76■□□□□ 0.59
FGFR1-231ENST00000527203 CLIP1P30622 1438 aa18.74■□□□□ 0.59
FGFR1-231ENST00000527203 PREX2Q70Z35 1606 aa18.74■□□□□ 0.59
FGFR1-231ENST00000527203 CASKIN1Q8WXD9 1431 aa18.74■□□□□ 0.59
FGFR1-231ENST00000527203 PLPPR3Q6T4P5 718 aa18.73■□□□□ 0.59
FGFR1-231ENST00000527203 CDK11AQ9UQ88 783 aaPredicted RBP18.73■□□□□ 0.59
FGFR1-231ENST00000527203 FER1L4A9Z1Z3 1794 aa18.73■□□□□ 0.59
FGFR1-231ENST00000527203 CCDC18Q5T9S5 1454 aa18.72■□□□□ 0.59
FGFR1-231ENST00000527203 MLECQ14165 292 aa18.7■□□□□ 0.58
FGFR1-231ENST00000527203 CDC42BPAQ5VT25 1732 aa18.7■□□□□ 0.58
FGFR1-231ENST00000527203 MAGI2Q86UL8 1455 aa18.7■□□□□ 0.58
FGFR1-231ENST00000527203 EFCAB2Q5VUJ9 269 aa18.69■□□□□ 0.58
FGFR1-231ENST00000527203 FYCO1Q9BQS8 1478 aa18.69■□□□□ 0.58
FGFR1-231ENST00000527203 ILDR1Q86SU0 546 aaPredicted RBP18.68■□□□□ 0.58
FGFR1-231ENST00000527203 ITSN2Q9NZM3 1697 aa18.68■□□□□ 0.58
FGFR1-231ENST00000527203 KDM5CP41229 1560 aa18.68■□□□□ 0.58
FGFR1-231ENST00000527203 ZNF518AQ6AHZ1 1483 aa18.66■□□□□ 0.58
FGFR1-231ENST00000527203 ABCC1P33527 1531 aa18.66■□□□□ 0.58
FGFR1-231ENST00000527203 ABCA6Q8N139 1617 aa18.66■□□□□ 0.58
FGFR1-231ENST00000527203 C9orf84Q5VXU9 1444 aa18.66■□□□□ 0.58
FGFR1-231ENST00000527203 LMTK3Q96Q04 1460 aa18.65■□□□□ 0.58
FGFR1-231ENST00000527203 DIP2CQ9Y2E4 1556 aa18.65■□□□□ 0.58
FGFR1-231ENST00000527203 ATP10AO60312 1499 aa18.65■□□□□ 0.58
FGFR1-231ENST00000527203 ARHGEF12Q9NZN5 1544 aa18.64■□□□□ 0.58
FGFR1-231ENST00000527203 AFAP1Q8N556 730 aa18.63■□□□□ 0.57
FGFR1-231ENST00000527203 TRAPPC8Q9Y2L5 1435 aa18.61■□□□□ 0.57
FGFR1-231ENST00000527203 MYT1LQ9UL68 1186 aa18.61■□□□□ 0.57
FGFR1-231ENST00000527203 SAMD9LQ8IVG5 1584 aa18.6■□□□□ 0.57
FGFR1-231ENST00000527203 KIDINS220Q9ULH0 1771 aa18.58■□□□□ 0.56
FGFR1-231ENST00000527203 HSPA2P54652 639 aa18.57■□□□□ 0.56
FGFR1-231ENST00000527203 SYCP2Q9BX26 1530 aa18.57■□□□□ 0.56
FGFR1-231ENST00000527203 ZNF777Q9ULD5 760 aaPredicted RBP18.55■□□□□ 0.56
FGFR1-231ENST00000527203 REREQ9P2R6 1566 aa18.54■□□□□ 0.56
FGFR1-231ENST00000527203 MLH3Q9UHC1 1453 aa18.53■□□□□ 0.56
FGFR1-231ENST00000527203 PREX1Q8TCU6 1659 aa18.53■□□□□ 0.56
FGFR1-231ENST00000527203 GPATCH8Q9UKJ3 1502 aaKnown RBP18.53■□□□□ 0.56
FGFR1-231ENST00000527203 CEP162Q5TB80 1403 aa18.52■□□□□ 0.56
FGFR1-231ENST00000527203 CEBPAP49715 358 aaPredicted RBP18.52■□□□□ 0.56
FGFR1-231ENST00000527203 TIAM1Q13009 1591 aa18.5■□□□□ 0.55
FGFR1-231ENST00000527203 C3P01024 1663 aa18.5■□□□□ 0.55
FGFR1-231ENST00000527203 MTUS2Q5JR59 1369 aa18.49■□□□□ 0.55
FGFR1-231ENST00000527203 SUPT6HQ7KZ85 1726 aaKnown RBP18.49■□□□□ 0.55
FGFR1-231ENST00000527203 EHBP1L1Q8N3D4 1523 aa18.48■□□□□ 0.55
FGFR1-231ENST00000527203 INO80Q9ULG1 1556 aaPredicted RBP18.47■□□□□ 0.55
FGFR1-231ENST00000527203 CCNB3Q8WWL7 1395 aa18.46■□□□□ 0.55
FGFR1-231ENST00000527203 HNRNPMP52272 730 aaKnown RBP eCLIP18.46■□□□□ 0.55
FGFR1-231ENST00000527203 AGLP35573 1532 aa18.45■□□□□ 0.54
FGFR1-231ENST00000527203 ATP7AQ04656 1500 aa18.45■□□□□ 0.54
FGFR1-231ENST00000527203 CFDP1Q9UEE9 299 aaPredicted RBP18.43■□□□□ 0.54
FGFR1-231ENST00000527203 SPAG9O60271 1321 aaKnown RBP18.41■□□□□ 0.54
FGFR1-231ENST00000527203 ZNF644Q9H582 1327 aaPredicted RBP18.4■□□□□ 0.54
FGFR1-231ENST00000527203 PLXNC1O60486 1568 aa18.39■□□□□ 0.53
FGFR1-231ENST00000527203 CLTCQ00610 1675 aaKnown RBP18.39■□□□□ 0.53
FGFR1-231ENST00000527203 STRCQ7RTU9 1775 aa18.39■□□□□ 0.53
FGFR1-231ENST00000527203 UHRF1BP1Q6BDS2 1440 aa18.39■□□□□ 0.53
FGFR1-231ENST00000527203 PLEKHH2Q8IVE3 1493 aa18.39■□□□□ 0.53
FGFR1-231ENST00000527203 LOC105371045A0A1W2PR82 267 aa18.37■□□□□ 0.53
FGFR1-231ENST00000527203 KIAA1107Q9UPP5 1409 aa18.37■□□□□ 0.53
FGFR1-231ENST00000527203 MROH2AA6NES4 1674 aa18.36■□□□□ 0.53
FGFR1-231ENST00000527203 FOXD1Q16676 465 aa18.36■□□□□ 0.53
FGFR1-231ENST00000527203 ADGBQ8N7X0 1667 aa18.36■□□□□ 0.53
FGFR1-231ENST00000527203 ESF1Q9H501 851 aaKnown RBP18.36■□□□□ 0.53
FGFR1-231ENST00000527203 NCOA2Q15596 1464 aa18.35■□□□□ 0.53
FGFR1-231ENST00000527203 FBXO41Q8TF61 875 aa18.35■□□□□ 0.53
FGFR1-231ENST00000527203 A2MP01023 1474 aa18.34■□□□□ 0.53
FGFR1-231ENST00000527203 MBD5Q9P267 1494 aa18.33■□□□□ 0.53
FGFR1-231ENST00000527203 CAMSAP2Q08AD1 1489 aa18.33■□□□□ 0.52
FGFR1-231ENST00000527203 CNTLNQ9NXG0 1405 aa18.31■□□□□ 0.52
FGFR1-231ENST00000527203 SETD1BQ9UPS6 1966 aaKnown RBP18.3■□□□□ 0.52
FGFR1-231ENST00000527203 VPS8Q8N3P4 1428 aa18.3■□□□□ 0.52
FGFR1-231ENST00000527203 MYO3AQ8NEV4 1616 aa18.29■□□□□ 0.52
FGFR1-231ENST00000527203 CCDC141Q6ZP82 1450 aa18.27■□□□□ 0.52
FGFR1-231ENST00000527203 GGT6Q6P531 493 aa18.27■□□□□ 0.52
FGFR1-231ENST00000527203 ZMYM3Q14202 1370 aa18.26■□□□□ 0.51
FGFR1-231ENST00000527203 LRRC9Q6ZRR7 1453 aa18.26■□□□□ 0.51
FGFR1-231ENST00000527203 CAMSAP1Q5T5Y3 1602 aa18.24■□□□□ 0.51
FGFR1-231ENST00000527203 ZNF142P52746 1687 aaPredicted RBP18.24■□□□□ 0.51
FGFR1-231ENST00000527203 CERKQ8TCT0 537 aa18.23■□□□□ 0.51
FGFR1-231ENST00000527203 NPATQ14207 1427 aa18.23■□□□□ 0.51
FGFR1-231ENST00000527203 RTEL1-TNFRSF6BF6WH68 1400 aa18.22■□□□□ 0.51
FGFR1-231ENST00000527203 ARHGEF5Q12774 1597 aa18.21■□□□□ 0.51
FGFR1-231ENST00000527203 NCOA1Q15788 1441 aa18.21■□□□□ 0.51
FGFR1-231ENST00000527203 CEP170BQ9Y4F5 1589 aaPredicted RBP18.21■□□□□ 0.51
FGFR1-231ENST00000527203 KANK4Q5T7N3 995 aaPredicted RBP18.2■□□□□ 0.5
FGFR1-231ENST00000527203 PTPRKQ15262 1439 aa18.2■□□□□ 0.5
FGFR1-231ENST00000527203 DHX29Q7Z478 1369 aaKnown RBP18.18■□□□□ 0.5
FGFR1-231ENST00000527203 KIF3BO15066 747 aa18.16■□□□□ 0.5
FGFR1-231ENST00000527203 KDM5DQ9BY66 1539 aa18.16■□□□□ 0.5
FGFR1-231ENST00000527203 PTPRTO14522 1441 aa18.15■□□□□ 0.5
FGFR1-231ENST00000527203 DMRT2Q9Y5R5 561 aa18.15■□□□□ 0.5
FGFR1-231ENST00000527203 NCKAP5LQ9HCH0 1330 aa18.14■□□□□ 0.49
FGFR1-231ENST00000527203 MAP3K1Q13233 1512 aa18.13■□□□□ 0.49
FGFR1-231ENST00000527203 MAST1Q9Y2H9 1570 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms