RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 PHLDB1Q86UU1 1377 aa25.56■■□□□ 1.68
CAPN1-205ENST00000526954 MYOM3Q5VTT5 1437 aa25.55■■□□□ 1.68
CAPN1-205ENST00000526954 ARHGAP5Q13017 1502 aa25.54■■□□□ 1.68
CAPN1-205ENST00000526954 CFAP74Q9C0B2 1584 aa25.54■■□□□ 1.68
CAPN1-205ENST00000526954 FANCAO15360 1455 aa25.53■■□□□ 1.68
CAPN1-205ENST00000526954 EFCAB2Q5VUJ9 269 aa25.53■■□□□ 1.68
CAPN1-205ENST00000526954 NEO1Q92859 1461 aa25.53■■□□□ 1.68
CAPN1-205ENST00000526954 CFDP1Q9UEE9 299 aaPredicted RBP25.51■■□□□ 1.67
CAPN1-205ENST00000526954 MIA2Q96PC5 1412 aa25.51■■□□□ 1.67
CAPN1-205ENST00000526954 FGD6Q6ZV73 1430 aa25.46■■□□□ 1.67
CAPN1-205ENST00000526954 AKNAQ7Z591 1439 aa25.46■■□□□ 1.67
CAPN1-205ENST00000526954 SAMD9LQ8IVG5 1584 aa25.45■■□□□ 1.66
CAPN1-205ENST00000526954 PTPN23Q9H3S7 1636 aa25.41■■□□□ 1.66
CAPN1-205ENST00000526954 PLEKHH2Q8IVE3 1493 aa25.41■■□□□ 1.66
CAPN1-205ENST00000526954 ZNF777Q9ULD5 760 aaPredicted RBP25.41■■□□□ 1.66
CAPN1-205ENST00000526954 KIAA1107Q9UPP5 1409 aa25.4■■□□□ 1.66
CAPN1-205ENST00000526954 ABCC1P33527 1531 aa25.4■■□□□ 1.66
CAPN1-205ENST00000526954 ADGRL1O94910 1474 aa25.4■■□□□ 1.66
CAPN1-205ENST00000526954 CAMSAP2Q08AD1 1489 aa25.4■■□□□ 1.66
CAPN1-205ENST00000526954 TCOF1Q13428 1488 aaKnown RBP25.4■■□□□ 1.66
CAPN1-205ENST00000526954 ZNF644Q9H582 1327 aaPredicted RBP25.38■■□□□ 1.65
CAPN1-205ENST00000526954 RRBP1Q9P2E9 1410 aaKnown RBP25.37■■□□□ 1.65
CAPN1-205ENST00000526954 SCAPERQ9BY12 1400 aa25.36■■□□□ 1.65
CAPN1-205ENST00000526954 ARHGEF12Q9NZN5 1544 aa25.35■■□□□ 1.65
CAPN1-205ENST00000526954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.33■■□□□ 1.65
CAPN1-205ENST00000526954 SYCP2Q9BX26 1530 aa25.33■■□□□ 1.65
CAPN1-205ENST00000526954 DENND4BO75064 1496 aaPredicted RBP25.33■■□□□ 1.65
CAPN1-205ENST00000526954 MBD5Q9P267 1494 aa25.33■■□□□ 1.65
CAPN1-205ENST00000526954 COL17A1Q9UMD9 1497 aaPredicted RBP25.33■■□□□ 1.65
CAPN1-205ENST00000526954 RICTORQ6R327 1708 aa25.31■■□□□ 1.64
CAPN1-205ENST00000526954 ARHGEF5Q12774 1597 aa25.31■■□□□ 1.64
CAPN1-205ENST00000526954 KDM6BO15054 1643 aa25.3■■□□□ 1.64
CAPN1-205ENST00000526954 HNRNPMP52272 730 aaKnown RBP eCLIP25.3■■□□□ 1.64
CAPN1-205ENST00000526954 POGZQ7Z3K3 1410 aa25.29■■□□□ 1.64
CAPN1-205ENST00000526954 RSPH4AQ5TD94 716 aa25.29■■□□□ 1.64
CAPN1-205ENST00000526954 TRAPPC8Q9Y2L5 1435 aa25.28■■□□□ 1.64
CAPN1-205ENST00000526954 ZNF518AQ6AHZ1 1483 aa25.28■■□□□ 1.64
CAPN1-205ENST00000526954 FRMPD1Q5SYB0 1578 aa25.27■■□□□ 1.64
CAPN1-205ENST00000526954 FAM50AQ14320 339 aaKnown RBP25.26■■□□□ 1.63
CAPN1-205ENST00000526954 KDM5CP41229 1560 aa25.25■■□□□ 1.63
CAPN1-205ENST00000526954 DNMT1P26358 1616 aaKnown RBP25.25■■□□□ 1.63
CAPN1-205ENST00000526954 CCDC141Q6ZP82 1450 aa25.24■■□□□ 1.63
CAPN1-205ENST00000526954 RAPGEF3O95398 923 aa25.24■■□□□ 1.63
CAPN1-205ENST00000526954 AFAP1Q8N556 730 aa25.22■■□□□ 1.63
CAPN1-205ENST00000526954 ZMYM4Q5VZL5 1548 aa25.22■■□□□ 1.63
CAPN1-205ENST00000526954 ABCC5O15440 1437 aa25.2■■□□□ 1.63
CAPN1-205ENST00000526954 DAPK1P53355 1430 aa25.2■■□□□ 1.63
CAPN1-205ENST00000526954 CROCC2H7BZ55 1655 aa25.2■■□□□ 1.63
CAPN1-205ENST00000526954 MLH3Q9UHC1 1453 aa25.17■■□□□ 1.62
CAPN1-205ENST00000526954 SHANK2Q9UPX8 1470 aa25.17■■□□□ 1.62
CAPN1-205ENST00000526954 MAST1Q9Y2H9 1570 aa25.17■■□□□ 1.62
CAPN1-205ENST00000526954 MAGI2Q86UL8 1455 aa25.16■■□□□ 1.62
CAPN1-205ENST00000526954 HECW2Q9P2P5 1572 aa25.15■■□□□ 1.62
CAPN1-205ENST00000526954 RTEL1-TNFRSF6BF6WH68 1400 aa25.15■■□□□ 1.62
CAPN1-205ENST00000526954 TSPY4P0CV99 314 aa25.15■■□□□ 1.62
CAPN1-205ENST00000526954 TSPY10P0CW01 314 aa25.15■■□□□ 1.62
CAPN1-205ENST00000526954 SPAG9O60271 1321 aaKnown RBP25.14■■□□□ 1.62
CAPN1-205ENST00000526954 INO80Q9ULG1 1556 aaPredicted RBP25.14■■□□□ 1.62
CAPN1-205ENST00000526954 KIDINS220Q9ULH0 1771 aa25.13■■□□□ 1.61
CAPN1-205ENST00000526954 ATP7AQ04656 1500 aa25.12■■□□□ 1.61
CAPN1-205ENST00000526954 ZFYVE16Q7Z3T8 1539 aa25.12■■□□□ 1.61
CAPN1-205ENST00000526954 C9orf84Q5VXU9 1444 aa25.12■■□□□ 1.61
CAPN1-205ENST00000526954 PTPRKQ15262 1439 aa25.11■■□□□ 1.61
CAPN1-205ENST00000526954 ADGBQ8N7X0 1667 aa25.07■■□□□ 1.6
CAPN1-205ENST00000526954 ADGRL2O95490 1459 aa25.07■■□□□ 1.6
CAPN1-205ENST00000526954 PLXNC1O60486 1568 aa25.05■■□□□ 1.6
CAPN1-205ENST00000526954 YEATS2Q9ULM3 1422 aa25.05■■□□□ 1.6
CAPN1-205ENST00000526954 ITGAEP38570 1179 aa25.05■■□□□ 1.6
CAPN1-205ENST00000526954 ARHGEF40Q8TER5 1519 aa25.05■■□□□ 1.6
CAPN1-205ENST00000526954 ABCA6Q8N139 1617 aa25.04■■□□□ 1.6
CAPN1-205ENST00000526954 MYT1LQ9UL68 1186 aa25.04■■□□□ 1.6
CAPN1-205ENST00000526954 ROCK1Q13464 1354 aa25.04■■□□□ 1.6
CAPN1-205ENST00000526954 DIP2CQ9Y2E4 1556 aa25.03■■□□□ 1.6
CAPN1-205ENST00000526954 TRIM26Q12899 539 aaPredicted RBP25.03■■□□□ 1.6
CAPN1-205ENST00000526954 CHIC2Q9UKJ5 165 aa25.03■■□□□ 1.6
CAPN1-205ENST00000526954 ANKRD30AQ9BXX3 1397 aa25.03■■□□□ 1.6
CAPN1-205ENST00000526954 NCOA1Q15788 1441 aa25.03■■□□□ 1.6
CAPN1-205ENST00000526954 ATP10AO60312 1499 aa25■■□□□ 1.59
CAPN1-205ENST00000526954 REREQ9P2R6 1566 aa24.98■■□□□ 1.59
CAPN1-205ENST00000526954 KIF15Q9NS87 1388 aa24.95■■□□□ 1.59
CAPN1-205ENST00000526954 RRP7BPQ9NSQ0 103 aa24.95■■□□□ 1.58
CAPN1-205ENST00000526954 A2MP01023 1474 aa24.95■■□□□ 1.58
CAPN1-205ENST00000526954 DUOX2Q9NRD8 1548 aa24.94■■□□□ 1.58
CAPN1-205ENST00000526954 DHX29Q7Z478 1369 aaKnown RBP24.93■■□□□ 1.58
CAPN1-205ENST00000526954 HFM1A2PYH4 1435 aa24.9■■□□□ 1.58
CAPN1-205ENST00000526954 GCC2Q8IWJ2 1684 aa24.89■■□□□ 1.58
CAPN1-205ENST00000526954 AGLP35573 1532 aa24.89■■□□□ 1.57
CAPN1-205ENST00000526954 SIGLEC1Q9BZZ2 1709 aa24.89■■□□□ 1.57
CAPN1-205ENST00000526954 NAIPQ13075 1403 aa24.88■■□□□ 1.57
CAPN1-205ENST00000526954 ERBINQ96RT1 1412 aa24.88■■□□□ 1.57
CAPN1-205ENST00000526954 EIF2AK4Q9P2K8 1649 aaKnown RBP24.87■■□□□ 1.57
CAPN1-205ENST00000526954 BCORL1Q5H9F3 1711 aa24.87■■□□□ 1.57
CAPN1-205ENST00000526954 ANKRD50Q9ULJ7 1429 aa24.86■■□□□ 1.57
CAPN1-205ENST00000526954 SETD5Q9C0A6 1442 aa24.78■■□□□ 1.56
CAPN1-205ENST00000526954 KIF3BO15066 747 aa24.78■■□□□ 1.56
CAPN1-205ENST00000526954 RNF17Q9BXT8 1623 aaKnown RBP24.78■■□□□ 1.56
CAPN1-205ENST00000526954 ARID4BQ4LE39 1312 aaPredicted RBP24.76■■□□□ 1.55
CAPN1-205ENST00000526954 DEPDC5O75140 1603 aa24.75■■□□□ 1.55
CAPN1-205ENST00000526954 MROH1Q8NDA8 1641 aa24.72■■□□□ 1.55
CAPN1-205ENST00000526954 UNC13BO14795 1591 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms