RNA–Protein interactions for RNA: ENST00000526937.5

CHEK1-208, Transcript of checkpoint kinase 1, humanhuman

TSL 4

Gene CHEK1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-208ENST00000526937 RIMBP2O15034 1052 aa12.06□□□□□ -0.48
CHEK1-208ENST00000526937 VARS2Q5ST30 1063 aaKnown RBP12.05□□□□□ -0.48
CHEK1-208ENST00000526937 MYT1LQ9UL68 1186 aa12.04□□□□□ -0.48
CHEK1-208ENST00000526937 CIZ1Q9ULV3 898 aaPredicted RBP12□□□□□ -0.49
CHEK1-208ENST00000526937 ZNF687Q8N1G0 1237 aa11.96□□□□□ -0.49
CHEK1-208ENST00000526937 ZSWIM6Q9HCJ5 1215 aa11.96□□□□□ -0.49
CHEK1-208ENST00000526937 SPOCK2Q92563 424 aa11.95□□□□□ -0.5
CHEK1-208ENST00000526937 PTGER2P43116 358 aa11.93□□□□□ -0.5
CHEK1-208ENST00000526937 EFCAB3Q8N7B9 438 aa11.93□□□□□ -0.5
CHEK1-208ENST00000526937 MICALL2Q8IY33 904 aa11.91□□□□□ -0.5
CHEK1-208ENST00000526937 TMEM92Q6UXU6 159 aa11.9□□□□□ -0.5
CHEK1-208ENST00000526937 GPR153Q6NV75 609 aa11.89□□□□□ -0.51
CHEK1-208ENST00000526937 IFNLR1Q8IU57 520 aaPredicted RBP11.86□□□□□ -0.51
CHEK1-208ENST00000526937 DNAJC5Q9H3Z4 198 aa11.85□□□□□ -0.51
CHEK1-208ENST00000526937 ANKRD13DQ6ZTN6 518 aa11.83□□□□□ -0.52
CHEK1-208ENST00000526937 ARSIQ5FYB1 569 aa11.8□□□□□ -0.52
CHEK1-208ENST00000526937 TRIM41Q8WV44 630 aa11.8□□□□□ -0.52
CHEK1-208ENST00000526937 SOX12O15370 315 aa11.77□□□□□ -0.53
CHEK1-208ENST00000526937 ZNF316A6NFI3 1004 aaPredicted RBP11.76□□□□□ -0.53
CHEK1-208ENST00000526937 LSM11P83369 360 aaKnown RBP eCLIP11.76□□□□□ -0.53
CHEK1-208ENST00000526937 MS4A4AQ96JQ5 239 aa11.76□□□□□ -0.53
CHEK1-208ENST00000526937 KHSRPQ92945 711 aaKnown RBP eCLIP11.73□□□□□ -0.53
CHEK1-208ENST00000526937 PHF8Q9UPP1 1060 aa11.72□□□□□ -0.53
CHEK1-208ENST00000526937 NCAPD3P42695 1498 aa11.68□□□□□ -0.54
CHEK1-208ENST00000526937 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.67□□□□□ -0.54
CHEK1-208ENST00000526937 RIOK3O14730 519 aaKnown RBP11.67□□□□□ -0.54
CHEK1-208ENST00000526937 ZFP91Q96JP5 570 aaPredicted RBP11.67□□□□□ -0.54
CHEK1-208ENST00000526937 ERCC6Q03468 1493 aa11.66□□□□□ -0.54
CHEK1-208ENST00000526937 ATAD2BQ9ULI0 1458 aa11.66□□□□□ -0.54
CHEK1-208ENST00000526937 PBX2P40425 430 aa11.66□□□□□ -0.54
CHEK1-208ENST00000526937 PLA2G2EQ9NZK7 142 aa11.66□□□□□ -0.54
CHEK1-208ENST00000526937 CUX2O14529 1486 aa11.64□□□□□ -0.55
CHEK1-208ENST00000526937 NESP48681 1621 aa11.64□□□□□ -0.55
CHEK1-208ENST00000526937 RNF25Q96BH1 459 aaPredicted RBP11.63□□□□□ -0.55
CHEK1-208ENST00000526937 SMARCA4P51532 1647 aa11.62□□□□□ -0.55
CHEK1-208ENST00000526937 VGFO15240 615 aaPredicted RBP11.62□□□□□ -0.55
CHEK1-208ENST00000526937 NUDT7P0C024 238 aa11.61□□□□□ -0.55
CHEK1-208ENST00000526937 HCSTQ9UBK5 93 aa11.61□□□□□ -0.55
CHEK1-208ENST00000526937 NLRP6P59044 892 aa11.59□□□□□ -0.55
CHEK1-208ENST00000526937 AXIN2Q9Y2T1 843 aa11.59□□□□□ -0.55
CHEK1-208ENST00000526937 POTEEQ6S8J3 1075 aa11.58□□□□□ -0.56
CHEK1-208ENST00000526937 LHX6Q9UPM6 363 aa11.57□□□□□ -0.56
CHEK1-208ENST00000526937 SMARCA2P51531 1590 aa11.56□□□□□ -0.56
CHEK1-208ENST00000526937 HMGXB3Q12766 1538 aa11.55□□□□□ -0.56
CHEK1-208ENST00000526937 KIF3CO14782 793 aa11.55□□□□□ -0.56
CHEK1-208ENST00000526937 FBXO22Q8NEZ5 403 aa11.55□□□□□ -0.56
CHEK1-208ENST00000526937 C2orf72A6NCS6 295 aa11.54□□□□□ -0.56
CHEK1-208ENST00000526937 BAZ1BQ9UIG0 1483 aaKnown RBP11.52□□□□□ -0.56
CHEK1-208ENST00000526937 PCDHGA4Q9Y5G9 962 aa11.52□□□□□ -0.57
CHEK1-208ENST00000526937 ADGRD1Q6QNK2 874 aa11.51□□□□□ -0.57
CHEK1-208ENST00000526937 BAZ1AQ9NRL2 1556 aaPredicted RBP11.5□□□□□ -0.57
CHEK1-208ENST00000526937 SLC34A2O95436 690 aa11.49□□□□□ -0.57
CHEK1-208ENST00000526937 MROH2BQ7Z745 1585 aa11.49□□□□□ -0.57
CHEK1-208ENST00000526937 THOC2Q8NI27 1593 aaKnown RBP11.49□□□□□ -0.57
CHEK1-208ENST00000526937 BCL11BQ9C0K0 894 aaPredicted RBP11.48□□□□□ -0.57
CHEK1-208ENST00000526937 ARHGAP33O14559 1287 aa11.47□□□□□ -0.57
CHEK1-208ENST00000526937 KIF21AQ7Z4S6 1674 aa11.46□□□□□ -0.57
CHEK1-208ENST00000526937 MFRPQ9BY79 579 aa11.46□□□□□ -0.57
CHEK1-208ENST00000526937 PEG3Q9GZU2 1588 aa11.45□□□□□ -0.58
CHEK1-208ENST00000526937 STK24Q9Y6E0 443 aa11.44□□□□□ -0.58
CHEK1-208ENST00000526937 PSDA5PKW4 1024 aaPredicted RBP11.43□□□□□ -0.58
CHEK1-208ENST00000526937 TAOK2Q9UL54 1235 aa11.43□□□□□ -0.58
CHEK1-208ENST00000526937 LAMC3Q9Y6N6 1575 aa11.42□□□□□ -0.58
CHEK1-208ENST00000526937 TMC2Q8TDI7 906 aa11.42□□□□□ -0.58
CHEK1-208ENST00000526937 TK2O00142 265 aa11.4□□□□□ -0.58
CHEK1-208ENST00000526937 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.58
CHEK1-208ENST00000526937 HRO43593 1189 aa11.39□□□□□ -0.59
CHEK1-208ENST00000526937 DMRTA1Q5VZB9 504 aa11.37□□□□□ -0.59
CHEK1-208ENST00000526937 KCTD12Q96CX2 325 aaKnown RBP11.37□□□□□ -0.59
CHEK1-208ENST00000526937 WIZO95785 1651 aa11.36□□□□□ -0.59
CHEK1-208ENST00000526937 PDS5BQ9NTI5 1447 aa11.35□□□□□ -0.59
CHEK1-208ENST00000526937 STK25O00506 426 aa11.35□□□□□ -0.59
CHEK1-208ENST00000526937 PSEN2P49810 448 aa11.35□□□□□ -0.59
CHEK1-208ENST00000526937 PKD2Q13563 968 aa11.35□□□□□ -0.59
CHEK1-208ENST00000526937 CADPSQ9ULU8 1353 aa11.33□□□□□ -0.6
CHEK1-208ENST00000526937 STAC3Q96MF2 364 aa11.33□□□□□ -0.6
CHEK1-208ENST00000526937 KDM4FA0A1W2PPD8 638 aa11.32□□□□□ -0.6
CHEK1-208ENST00000526937 PPP4R3BQ5MIZ7 849 aa11.3□□□□□ -0.6
CHEK1-208ENST00000526937 PTCD2Q8WV60 388 aaKnown RBP11.29□□□□□ -0.6
CHEK1-208ENST00000526937 MRC2Q9UBG0 1479 aa11.29□□□□□ -0.6
CHEK1-208ENST00000526937 WDR62O43379 1518 aa11.27□□□□□ -0.61
CHEK1-208ENST00000526937 RGS20O76081 388 aa11.26□□□□□ -0.61
CHEK1-208ENST00000526937 AMER1Q5JTC6 1135 aaPredicted RBP11.25□□□□□ -0.61
CHEK1-208ENST00000526937 KCNH8Q96L42 1107 aa11.25□□□□□ -0.61
CHEK1-208ENST00000526937 PTPN5P54829 565 aa11.24□□□□□ -0.61
CHEK1-208ENST00000526937 KCNK17Q96T54 332 aa11.24□□□□□ -0.61
CHEK1-208ENST00000526937 IRX2Q9BZI1 471 aaPredicted RBP11.24□□□□□ -0.61
CHEK1-208ENST00000526937 CEP164Q9UPV0 1460 aa11.22□□□□□ -0.61
CHEK1-208ENST00000526937 FANCD2Q9BXW9 1451 aa11.21□□□□□ -0.61
CHEK1-208ENST00000526937 RGL2O15211 777 aa11.21□□□□□ -0.61
CHEK1-208ENST00000526937 PPP1R37O75864 691 aa11.21□□□□□ -0.61
CHEK1-208ENST00000526937 IFFO2Q5TF58 517 aa11.21□□□□□ -0.61
CHEK1-208ENST00000526937 PLPP6Q8IY26 295 aa11.19□□□□□ -0.62
CHEK1-208ENST00000526937 VPS9D1Q9Y2B5 631 aa11.19□□□□□ -0.62
CHEK1-208ENST00000526937 FOXK1P85037 733 aa11.18□□□□□ -0.62
CHEK1-208ENST00000526937 TBC1D12O60347 775 aa11.17□□□□□ -0.62
CHEK1-208ENST00000526937 CFTRP13569 1480 aa11.17□□□□□ -0.62
CHEK1-208ENST00000526937 RSF1Q96T23 1441 aaPredicted RBP11.17□□□□□ -0.62
CHEK1-208ENST00000526937 URB2Q14146 1524 aaKnown RBP11.16□□□□□ -0.62
CHEK1-208ENST00000526937 A0A0G2JS52 829 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms