RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 EFCAB2Q5VUJ9 269 aa21.61■■□□□ 1.05
USH1C-203ENST00000526181 POGZQ7Z3K3 1410 aa21.61■■□□□ 1.05
USH1C-203ENST00000526181 ZMYM4Q5VZL5 1548 aa21.6■■□□□ 1.05
USH1C-203ENST00000526181 PREX2Q70Z35 1606 aa21.58■■□□□ 1.05
USH1C-203ENST00000526181 CDC42BPBQ9Y5S2 1711 aa21.58■■□□□ 1.05
USH1C-203ENST00000526181 YEATS2Q9ULM3 1422 aa21.57■■□□□ 1.04
USH1C-203ENST00000526181 ZFYVE16Q7Z3T8 1539 aa21.56■■□□□ 1.04
USH1C-203ENST00000526181 CDC42BPAQ5VT25 1732 aa21.54■■□□□ 1.04
USH1C-203ENST00000526181 SIGLEC1Q9BZZ2 1709 aa21.52■■□□□ 1.03
USH1C-203ENST00000526181 MAGI2Q86UL8 1455 aa21.52■■□□□ 1.03
USH1C-203ENST00000526181 ARID4BQ4LE39 1312 aaPredicted RBP21.51■■□□□ 1.03
USH1C-203ENST00000526181 ABCC1P33527 1531 aa21.5■■□□□ 1.03
USH1C-203ENST00000526181 ARHGEF12Q9NZN5 1544 aa21.5■■□□□ 1.03
USH1C-203ENST00000526181 MTUS2Q5JR59 1369 aa21.5■■□□□ 1.03
USH1C-203ENST00000526181 ZNF518AQ6AHZ1 1483 aa21.5■■□□□ 1.03
USH1C-203ENST00000526181 ADAMTSL3P82987 1691 aa21.5■■□□□ 1.03
USH1C-203ENST00000526181 GPATCH8Q9UKJ3 1502 aaKnown RBP21.5■■□□□ 1.03
USH1C-203ENST00000526181 BCORL1Q5H9F3 1711 aa21.49■■□□□ 1.03
USH1C-203ENST00000526181 AFAP1Q8N556 730 aa21.49■■□□□ 1.03
USH1C-203ENST00000526181 KDM5CP41229 1560 aa21.48■■□□□ 1.03
USH1C-203ENST00000526181 EHBP1L1Q8N3D4 1523 aa21.48■■□□□ 1.03
USH1C-203ENST00000526181 ITSN2Q9NZM3 1697 aa21.47■■□□□ 1.03
USH1C-203ENST00000526181 VPS8Q8N3P4 1428 aa21.46■■□□□ 1.03
USH1C-203ENST00000526181 SAMD9LQ8IVG5 1584 aa21.46■■□□□ 1.03
USH1C-203ENST00000526181 TRAPPC8Q9Y2L5 1435 aa21.46■■□□□ 1.03
USH1C-203ENST00000526181 MADDQ8WXG6 1647 aa21.44■■□□□ 1.02
USH1C-203ENST00000526181 ZNF777Q9ULD5 760 aaPredicted RBP21.44■■□□□ 1.02
USH1C-203ENST00000526181 CCNB3Q8WWL7 1395 aa21.44■■□□□ 1.02
USH1C-203ENST00000526181 TIAM1Q13009 1591 aa21.43■■□□□ 1.02
USH1C-203ENST00000526181 HECW2Q9P2P5 1572 aa21.43■■□□□ 1.02
USH1C-203ENST00000526181 ATP10AO60312 1499 aa21.42■■□□□ 1.02
USH1C-203ENST00000526181 SYCP2Q9BX26 1530 aa21.41■■□□□ 1.02
USH1C-203ENST00000526181 PTPRMP28827 1452 aa21.41■■□□□ 1.02
USH1C-203ENST00000526181 C9orf84Q5VXU9 1444 aa21.41■■□□□ 1.02
USH1C-203ENST00000526181 DIP2CQ9Y2E4 1556 aa21.4■■□□□ 1.02
USH1C-203ENST00000526181 CFDP1Q9UEE9 299 aaPredicted RBP21.39■■□□□ 1.01
USH1C-203ENST00000526181 MYT1LQ9UL68 1186 aa21.39■■□□□ 1.01
USH1C-203ENST00000526181 ABCA6Q8N139 1617 aa21.39■■□□□ 1.01
USH1C-203ENST00000526181 MLH3Q9UHC1 1453 aa21.39■■□□□ 1.01
USH1C-203ENST00000526181 RIMS1Q86UR5 1692 aaKnown RBP21.37■■□□□ 1.01
USH1C-203ENST00000526181 HNRNPMP52272 730 aaKnown RBP eCLIP21.36■■□□□ 1.01
USH1C-203ENST00000526181 MLECQ14165 292 aa21.36■■□□□ 1.01
USH1C-203ENST00000526181 NCOA2Q15596 1464 aa21.35■■□□□ 1.01
USH1C-203ENST00000526181 SUPT6HQ7KZ85 1726 aaKnown RBP21.34■■□□□ 1.01
USH1C-203ENST00000526181 ZNF644Q9H582 1327 aaPredicted RBP21.33■■□□□ 1.01
USH1C-203ENST00000526181 KIDINS220Q9ULH0 1771 aa21.33■■□□□ 1
USH1C-203ENST00000526181 LRRC9Q6ZRR7 1453 aa21.32■■□□□ 1
USH1C-203ENST00000526181 KIAA1107Q9UPP5 1409 aa21.32■■□□□ 1
USH1C-203ENST00000526181 PLEKHH2Q8IVE3 1493 aa21.32■■□□□ 1
USH1C-203ENST00000526181 REREQ9P2R6 1566 aa21.31■■□□□ 1
USH1C-203ENST00000526181 KANK4Q5T7N3 995 aaPredicted RBP21.29■■□□□ 1
USH1C-203ENST00000526181 FER1L4A9Z1Z3 1794 aa21.28■■□□□ 1
USH1C-203ENST00000526181 MAP3K1Q13233 1512 aa21.28■■□□□ 1
USH1C-203ENST00000526181 INO80Q9ULG1 1556 aaPredicted RBP21.27■■□□□ 1
USH1C-203ENST00000526181 PLPPR3Q6T4P5 718 aa21.27■■□□□ 1
USH1C-203ENST00000526181 SPAG9O60271 1321 aaKnown RBP21.27■□□□□ 0.99
USH1C-203ENST00000526181 MBD5Q9P267 1494 aa21.26■□□□□ 0.99
USH1C-203ENST00000526181 ATP7AQ04656 1500 aa21.26■□□□□ 0.99
USH1C-203ENST00000526181 CAMSAP2Q08AD1 1489 aa21.24■□□□□ 0.99
USH1C-203ENST00000526181 AGLP35573 1532 aa21.24■□□□□ 0.99
USH1C-203ENST00000526181 LMTK3Q96Q04 1460 aa21.19■□□□□ 0.98
USH1C-203ENST00000526181 CCDC141Q6ZP82 1450 aa21.17■□□□□ 0.98
USH1C-203ENST00000526181 PLXNC1O60486 1568 aa21.17■□□□□ 0.98
USH1C-203ENST00000526181 A2MP01023 1474 aa21.16■□□□□ 0.98
USH1C-203ENST00000526181 CEBPAP49715 358 aaPredicted RBP21.16■□□□□ 0.98
USH1C-203ENST00000526181 MYOM3Q5VTT5 1437 aa21.14■□□□□ 0.98
USH1C-203ENST00000526181 APLP2Q06481 763 aa21.13■□□□□ 0.97
USH1C-203ENST00000526181 RTEL1-TNFRSF6BF6WH68 1400 aa21.12■□□□□ 0.97
USH1C-203ENST00000526181 ADGBQ8N7X0 1667 aa21.12■□□□□ 0.97
USH1C-203ENST00000526181 ARHGEF5Q12774 1597 aa21.12■□□□□ 0.97
USH1C-203ENST00000526181 MIA2Q96PC5 1412 aa21.09■□□□□ 0.97
USH1C-203ENST00000526181 C3P01024 1663 aa21.09■□□□□ 0.97
USH1C-203ENST00000526181 HSPA2P54652 639 aa21.08■□□□□ 0.97
USH1C-203ENST00000526181 ESF1Q9H501 851 aaKnown RBP21.07■□□□□ 0.96
USH1C-203ENST00000526181 RSPH4AQ5TD94 716 aa21.06■□□□□ 0.96
USH1C-203ENST00000526181 DHX29Q7Z478 1369 aaKnown RBP21.05■□□□□ 0.96
USH1C-203ENST00000526181 PREX1Q8TCU6 1659 aa21.05■□□□□ 0.96
USH1C-203ENST00000526181 CNTLNQ9NXG0 1405 aa21.04■□□□□ 0.96
USH1C-203ENST00000526181 GGT6Q6P531 493 aa21.04■□□□□ 0.96
USH1C-203ENST00000526181 CLTCQ00610 1675 aaKnown RBP21.03■□□□□ 0.96
USH1C-203ENST00000526181 MAST1Q9Y2H9 1570 aa21.02■□□□□ 0.96
USH1C-203ENST00000526181 TSPY4P0CV99 314 aa21.02■□□□□ 0.96
USH1C-203ENST00000526181 TSPY10P0CW01 314 aa21.02■□□□□ 0.96
USH1C-203ENST00000526181 MROH2AA6NES4 1674 aa21.02■□□□□ 0.95
USH1C-203ENST00000526181 PTPN23Q9H3S7 1636 aa21.01■□□□□ 0.95
USH1C-203ENST00000526181 ZMYM3Q14202 1370 aa20.99■□□□□ 0.95
USH1C-203ENST00000526181 FGD6Q6ZV73 1430 aa20.99■□□□□ 0.95
USH1C-203ENST00000526181 UHRF1BP1Q6BDS2 1440 aa20.98■□□□□ 0.95
USH1C-203ENST00000526181 KIF3BO15066 747 aa20.97■□□□□ 0.95
USH1C-203ENST00000526181 TCOF1Q13428 1488 aaKnown RBP20.96■□□□□ 0.95
USH1C-203ENST00000526181 ABCC5O15440 1437 aa20.95■□□□□ 0.95
USH1C-203ENST00000526181 CROCC2H7BZ55 1655 aa20.95■□□□□ 0.94
USH1C-203ENST00000526181 DAPK1P53355 1430 aa20.93■□□□□ 0.94
USH1C-203ENST00000526181 NPATQ14207 1427 aa20.93■□□□□ 0.94
USH1C-203ENST00000526181 DNMT1P26358 1616 aaKnown RBP20.93■□□□□ 0.94
USH1C-203ENST00000526181 SHANK2Q9UPX8 1470 aa20.92■□□□□ 0.94
USH1C-203ENST00000526181 PTPRKQ15262 1439 aa20.91■□□□□ 0.94
USH1C-203ENST00000526181 KDM5DQ9BY66 1539 aa20.91■□□□□ 0.94
USH1C-203ENST00000526181 PPP6R1Q9UPN7 881 aa20.91■□□□□ 0.94
USH1C-203ENST00000526181 RNF17Q9BXT8 1623 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms