RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 YEATS2Q9ULM3 1422 aa19.67■□□□□ 0.74
SSBP3-210ENST00000525990 FYCO1Q9BQS8 1478 aa19.67■□□□□ 0.74
SSBP3-210ENST00000525990 CDC42BPAQ5VT25 1732 aa19.66■□□□□ 0.74
SSBP3-210ENST00000525990 CCDC18Q5T9S5 1454 aa19.66■□□□□ 0.74
SSBP3-210ENST00000525990 PREX2Q70Z35 1606 aa19.65■□□□□ 0.74
SSBP3-210ENST00000525990 POGZQ7Z3K3 1410 aa19.65■□□□□ 0.74
SSBP3-210ENST00000525990 SCAPERQ9BY12 1400 aa19.65■□□□□ 0.74
SSBP3-210ENST00000525990 ARHGAP5Q13017 1502 aa19.65■□□□□ 0.74
SSBP3-210ENST00000525990 ZFYVE16Q7Z3T8 1539 aa19.65■□□□□ 0.74
SSBP3-210ENST00000525990 CDK11AQ9UQ88 783 aaPredicted RBP19.64■□□□□ 0.73
SSBP3-210ENST00000525990 RIMS1Q86UR5 1692 aaKnown RBP19.62■□□□□ 0.73
SSBP3-210ENST00000525990 PTPRMP28827 1452 aa19.6■□□□□ 0.73
SSBP3-210ENST00000525990 ARID4BQ4LE39 1312 aaPredicted RBP19.59■□□□□ 0.73
SSBP3-210ENST00000525990 ITSN2Q9NZM3 1697 aa19.59■□□□□ 0.73
SSBP3-210ENST00000525990 EFCAB2Q5VUJ9 269 aa19.57■□□□□ 0.72
SSBP3-210ENST00000525990 KDM5CP41229 1560 aa19.57■□□□□ 0.72
SSBP3-210ENST00000525990 ABCC1P33527 1531 aa19.56■□□□□ 0.72
SSBP3-210ENST00000525990 MAGI2Q86UL8 1455 aa19.55■□□□□ 0.72
SSBP3-210ENST00000525990 CEP162Q5TB80 1403 aa19.55■□□□□ 0.72
SSBP3-210ENST00000525990 ARHGEF12Q9NZN5 1544 aa19.55■□□□□ 0.72
SSBP3-210ENST00000525990 FER1L4A9Z1Z3 1794 aa19.55■□□□□ 0.72
SSBP3-210ENST00000525990 ZNF518AQ6AHZ1 1483 aa19.53■□□□□ 0.72
SSBP3-210ENST00000525990 ABCA6Q8N139 1617 aa19.52■□□□□ 0.72
SSBP3-210ENST00000525990 SAMD9LQ8IVG5 1584 aa19.52■□□□□ 0.71
SSBP3-210ENST00000525990 DIP2CQ9Y2E4 1556 aa19.52■□□□□ 0.71
SSBP3-210ENST00000525990 AFAP1Q8N556 730 aa19.5■□□□□ 0.71
SSBP3-210ENST00000525990 TRAPPC8Q9Y2L5 1435 aa19.5■□□□□ 0.71
SSBP3-210ENST00000525990 ATP10AO60312 1499 aa19.48■□□□□ 0.71
SSBP3-210ENST00000525990 KIDINS220Q9ULH0 1771 aa19.48■□□□□ 0.71
SSBP3-210ENST00000525990 C9orf84Q5VXU9 1444 aa19.48■□□□□ 0.71
SSBP3-210ENST00000525990 GPATCH8Q9UKJ3 1502 aaKnown RBP19.47■□□□□ 0.71
SSBP3-210ENST00000525990 MLECQ14165 292 aa19.47■□□□□ 0.71
SSBP3-210ENST00000525990 LOC105371045A0A1W2PR82 267 aa19.46■□□□□ 0.71
SSBP3-210ENST00000525990 SYCP2Q9BX26 1530 aa19.46■□□□□ 0.71
SSBP3-210ENST00000525990 TIAM1Q13009 1591 aa19.44■□□□□ 0.7
SSBP3-210ENST00000525990 PLPPR3Q6T4P5 718 aa19.44■□□□□ 0.7
SSBP3-210ENST00000525990 EHBP1L1Q8N3D4 1523 aa19.43■□□□□ 0.7
SSBP3-210ENST00000525990 ZNF777Q9ULD5 760 aaPredicted RBP19.42■□□□□ 0.7
SSBP3-210ENST00000525990 MTUS2Q5JR59 1369 aa19.42■□□□□ 0.7
SSBP3-210ENST00000525990 LMTK3Q96Q04 1460 aa19.41■□□□□ 0.7
SSBP3-210ENST00000525990 MLH3Q9UHC1 1453 aa19.41■□□□□ 0.7
SSBP3-210ENST00000525990 REREQ9P2R6 1566 aa19.41■□□□□ 0.7
SSBP3-210ENST00000525990 MYT1LQ9UL68 1186 aa19.4■□□□□ 0.7
SSBP3-210ENST00000525990 CCNB3Q8WWL7 1395 aa19.37■□□□□ 0.69
SSBP3-210ENST00000525990 INO80Q9ULG1 1556 aaPredicted RBP19.36■□□□□ 0.69
SSBP3-210ENST00000525990 SUPT6HQ7KZ85 1726 aaKnown RBP19.36■□□□□ 0.69
SSBP3-210ENST00000525990 HNRNPMP52272 730 aaKnown RBP eCLIP19.35■□□□□ 0.691e-6■■■■□ 26.1
SSBP3-210ENST00000525990 C3P01024 1663 aa19.33■□□□□ 0.69
SSBP3-210ENST00000525990 CFDP1Q9UEE9 299 aaPredicted RBP19.33■□□□□ 0.68
SSBP3-210ENST00000525990 ATP7AQ04656 1500 aa19.33■□□□□ 0.68
SSBP3-210ENST00000525990 ZNF644Q9H582 1327 aaPredicted RBP19.32■□□□□ 0.68
SSBP3-210ENST00000525990 AGLP35573 1532 aa19.32■□□□□ 0.68
SSBP3-210ENST00000525990 PREX1Q8TCU6 1659 aa19.32■□□□□ 0.68
SSBP3-210ENST00000525990 VPS8Q8N3P4 1428 aa19.32■□□□□ 0.68
SSBP3-210ENST00000525990 CEBPAP49715 358 aaPredicted RBP19.31■□□□□ 0.68
SSBP3-210ENST00000525990 NCOA2Q15596 1464 aa19.3■□□□□ 0.68
SSBP3-210ENST00000525990 KIAA1107Q9UPP5 1409 aa19.29■□□□□ 0.68
SSBP3-210ENST00000525990 HSPA2P54652 639 aa19.29■□□□□ 0.68
SSBP3-210ENST00000525990 PLEKHH2Q8IVE3 1493 aa19.28■□□□□ 0.68
SSBP3-210ENST00000525990 PLXNC1O60486 1568 aa19.27■□□□□ 0.68
SSBP3-210ENST00000525990 SPAG9O60271 1321 aaKnown RBP19.27■□□□□ 0.68
SSBP3-210ENST00000525990 ADGBQ8N7X0 1667 aa19.27■□□□□ 0.68
SSBP3-210ENST00000525990 MBD5Q9P267 1494 aa19.27■□□□□ 0.67
SSBP3-210ENST00000525990 CAMSAP2Q08AD1 1489 aa19.24■□□□□ 0.67
SSBP3-210ENST00000525990 LRRC9Q6ZRR7 1453 aa19.24■□□□□ 0.67
SSBP3-210ENST00000525990 ILDR1Q86SU0 546 aaPredicted RBP19.24■□□□□ 0.67
SSBP3-210ENST00000525990 CLTCQ00610 1675 aaKnown RBP19.24■□□□□ 0.67
SSBP3-210ENST00000525990 A2MP01023 1474 aa19.22■□□□□ 0.67
SSBP3-210ENST00000525990 MROH2AA6NES4 1674 aa19.21■□□□□ 0.67
SSBP3-210ENST00000525990 KANK4Q5T7N3 995 aaPredicted RBP19.2■□□□□ 0.66
SSBP3-210ENST00000525990 STRCQ7RTU9 1775 aa19.19■□□□□ 0.66
SSBP3-210ENST00000525990 SETD1BQ9UPS6 1966 aaKnown RBP19.19■□□□□ 0.66
SSBP3-210ENST00000525990 CCDC141Q6ZP82 1450 aa19.16■□□□□ 0.66
SSBP3-210ENST00000525990 MAP3K1Q13233 1512 aa19.16■□□□□ 0.66
SSBP3-210ENST00000525990 ARHGEF5Q12774 1597 aa19.15■□□□□ 0.66
SSBP3-210ENST00000525990 UHRF1BP1Q6BDS2 1440 aa19.14■□□□□ 0.65
SSBP3-210ENST00000525990 ESF1Q9H501 851 aaKnown RBP19.13■□□□□ 0.65
SSBP3-210ENST00000525990 RTEL1-TNFRSF6BF6WH68 1400 aa19.13■□□□□ 0.65
SSBP3-210ENST00000525990 CNTLNQ9NXG0 1405 aa19.13■□□□□ 0.65
SSBP3-210ENST00000525990 GGT6Q6P531 493 aa19.09■□□□□ 0.65
SSBP3-210ENST00000525990 MYO3AQ8NEV4 1616 aa19.09■□□□□ 0.65
SSBP3-210ENST00000525990 ZMYM3Q14202 1370 aa19.08■□□□□ 0.65
SSBP3-210ENST00000525990 MYOM3Q5VTT5 1437 aa19.08■□□□□ 0.64
SSBP3-210ENST00000525990 DHX29Q7Z478 1369 aaKnown RBP19.06■□□□□ 0.64
SSBP3-210ENST00000525990 MAST1Q9Y2H9 1570 aa19.06■□□□□ 0.64
SSBP3-210ENST00000525990 CROCC2H7BZ55 1655 aa19.06■□□□□ 0.64
SSBP3-210ENST00000525990 ZNF142P52746 1687 aaPredicted RBP19.06■□□□□ 0.64
SSBP3-210ENST00000525990 NPATQ14207 1427 aa19.04■□□□□ 0.64
SSBP3-210ENST00000525990 PTPN23Q9H3S7 1636 aa19.03■□□□□ 0.64
SSBP3-210ENST00000525990 PTPRKQ15262 1439 aa19.03■□□□□ 0.64
SSBP3-210ENST00000525990 MIA2Q96PC5 1412 aa19.01■□□□□ 0.63
SSBP3-210ENST00000525990 CAMSAP1Q5T5Y3 1602 aa19.01■□□□□ 0.63
SSBP3-210ENST00000525990 KIF3BO15066 747 aa19.01■□□□□ 0.63
SSBP3-210ENST00000525990 CEP170BQ9Y4F5 1589 aaPredicted RBP19.01■□□□□ 0.63
SSBP3-210ENST00000525990 KDM5DQ9BY66 1539 aa19■□□□□ 0.63
SSBP3-210ENST00000525990 RNF17Q9BXT8 1623 aaKnown RBP19■□□□□ 0.63
SSBP3-210ENST00000525990 RSPH4AQ5TD94 716 aa18.99■□□□□ 0.63
SSBP3-210ENST00000525990 CEP152O94986 1710 aa18.99■□□□□ 0.63
SSBP3-210ENST00000525990 MROH1Q8NDA8 1641 aa18.98■□□□□ 0.63
SSBP3-210ENST00000525990 NCOA1Q15788 1441 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms