RNA–Protein interactions for RNA: ENST00000525592.1

TM9SF1-204, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-204ENST00000525592 SCAPERQ9BY12 1400 aa32.29■■■□□ 2.76
TM9SF1-204ENST00000525592 ARHGAP5Q13017 1502 aa32.29■■■□□ 2.76
TM9SF1-204ENST00000525592 MAGI2Q86UL8 1455 aa32.29■■■□□ 2.76
TM9SF1-204ENST00000525592 PREX2Q70Z35 1606 aa32.24■■■□□ 2.75
TM9SF1-204ENST00000525592 ZFYVE16Q7Z3T8 1539 aa32.24■■■□□ 2.75
TM9SF1-204ENST00000525592 CDC42BPBQ9Y5S2 1711 aa32.23■■■□□ 2.75
TM9SF1-204ENST00000525592 ADAMTSL3P82987 1691 aa32.2■■■□□ 2.74
TM9SF1-204ENST00000525592 BCORL1Q5H9F3 1711 aa32.19■■■□□ 2.74
TM9SF1-204ENST00000525592 ZNF518AQ6AHZ1 1483 aa32.18■■■□□ 2.74
TM9SF1-204ENST00000525592 YEATS2Q9ULM3 1422 aa32.16■■■□□ 2.74
TM9SF1-204ENST00000525592 CDC42BPAQ5VT25 1732 aa32.15■■■□□ 2.74
TM9SF1-204ENST00000525592 ARID4BQ4LE39 1312 aaPredicted RBP32.15■■■□□ 2.74
TM9SF1-204ENST00000525592 KDM5CP41229 1560 aa32.13■■■□□ 2.73
TM9SF1-204ENST00000525592 ABCC1P33527 1531 aa32.11■■■□□ 2.73
TM9SF1-204ENST00000525592 MTUS2Q5JR59 1369 aa32.08■■■□□ 2.73
TM9SF1-204ENST00000525592 MADDQ8WXG6 1647 aa32.07■■■□□ 2.72
TM9SF1-204ENST00000525592 PTPRMP28827 1452 aa32.06■■■□□ 2.72
TM9SF1-204ENST00000525592 HECW2Q9P2P5 1572 aa32.06■■■□□ 2.72
TM9SF1-204ENST00000525592 ITSN2Q9NZM3 1697 aa32.05■■■□□ 2.72
TM9SF1-204ENST00000525592 ATP10AO60312 1499 aa32.05■■■□□ 2.72
TM9SF1-204ENST00000525592 EHBP1L1Q8N3D4 1523 aa32.05■■■□□ 2.72
TM9SF1-204ENST00000525592 GPATCH8Q9UKJ3 1502 aaKnown RBP32.05■■■□□ 2.72
TM9SF1-204ENST00000525592 SIGLEC1Q9BZZ2 1709 aa32.04■■■□□ 2.72
TM9SF1-204ENST00000525592 C9orf84Q5VXU9 1444 aa32.03■■■□□ 2.72
TM9SF1-204ENST00000525592 LOC105371045A0A1W2PR82 267 aa32.03■■■□□ 2.72
TM9SF1-204ENST00000525592 AFAP1Q8N556 730 aa32.03■■■□□ 2.72
TM9SF1-204ENST00000525592 ARHGEF12Q9NZN5 1544 aa32.01■■■□□ 2.72
TM9SF1-204ENST00000525592 MLH3Q9UHC1 1453 aa32■■■□□ 2.71
TM9SF1-204ENST00000525592 SAMD9LQ8IVG5 1584 aa31.98■■■□□ 2.71
TM9SF1-204ENST00000525592 CCNB3Q8WWL7 1395 aa31.98■■■□□ 2.71
TM9SF1-204ENST00000525592 TRAPPC8Q9Y2L5 1435 aa31.98■■■□□ 2.71
TM9SF1-204ENST00000525592 VPS8Q8N3P4 1428 aa31.96■■■□□ 2.71
TM9SF1-204ENST00000525592 DIP2CQ9Y2E4 1556 aa31.95■■■□□ 2.71
TM9SF1-204ENST00000525592 RIMS1Q86UR5 1692 aaKnown RBP31.95■■■□□ 2.7
TM9SF1-204ENST00000525592 REREQ9P2R6 1566 aa31.94■■■□□ 2.7
TM9SF1-204ENST00000525592 PLEKHH2Q8IVE3 1493 aa31.93■■■□□ 2.7
TM9SF1-204ENST00000525592 SYCP2Q9BX26 1530 aa31.92■■■□□ 2.7
TM9SF1-204ENST00000525592 CFDP1Q9UEE9 299 aaPredicted RBP31.92■■■□□ 2.7
TM9SF1-204ENST00000525592 TIAM1Q13009 1591 aa31.92■■■□□ 2.7
TM9SF1-204ENST00000525592 ABCA6Q8N139 1617 aa31.92■■■□□ 2.7
TM9SF1-204ENST00000525592 ZNF777Q9ULD5 760 aaPredicted RBP31.91■■■□□ 2.7
TM9SF1-204ENST00000525592 KIAA1107Q9UPP5 1409 aa31.91■■■□□ 2.7
TM9SF1-204ENST00000525592 MYT1LQ9UL68 1186 aa31.9■■■□□ 2.7
TM9SF1-204ENST00000525592 FER1L4A9Z1Z3 1794 aa31.89■■■□□ 2.69
TM9SF1-204ENST00000525592 KIDINS220Q9ULH0 1771 aa31.87■■■□□ 2.69
TM9SF1-204ENST00000525592 SUPT6HQ7KZ85 1726 aaKnown RBP31.86■■■□□ 2.69
TM9SF1-204ENST00000525592 MLECQ14165 292 aa31.83■■■□□ 2.69
TM9SF1-204ENST00000525592 AGLP35573 1532 aa31.81■■■□□ 2.68
TM9SF1-204ENST00000525592 NCOA2Q15596 1464 aa31.8■■■□□ 2.68
TM9SF1-204ENST00000525592 HNRNPMP52272 730 aaKnown RBP eCLIP31.79■■■□□ 2.68
TM9SF1-204ENST00000525592 MAP3K1Q13233 1512 aa31.79■■■□□ 2.68
TM9SF1-204ENST00000525592 SPAG9O60271 1321 aaKnown RBP31.77■■■□□ 2.68
TM9SF1-204ENST00000525592 LRRC9Q6ZRR7 1453 aa31.76■■■□□ 2.67
TM9SF1-204ENST00000525592 INO80Q9ULG1 1556 aaPredicted RBP31.76■■■□□ 2.67
TM9SF1-204ENST00000525592 ATP7AQ04656 1500 aa31.75■■■□□ 2.67
TM9SF1-204ENST00000525592 LMTK3Q96Q04 1460 aa31.71■■■□□ 2.67
TM9SF1-204ENST00000525592 MBD5Q9P267 1494 aa31.71■■■□□ 2.67
TM9SF1-204ENST00000525592 ZNF644Q9H582 1327 aaPredicted RBP31.7■■■□□ 2.66
TM9SF1-204ENST00000525592 CAMSAP2Q08AD1 1489 aa31.65■■■□□ 2.66
TM9SF1-204ENST00000525592 PLXNC1O60486 1568 aa31.64■■■□□ 2.66
TM9SF1-204ENST00000525592 PLPPR3Q6T4P5 718 aa31.63■■■□□ 2.65
TM9SF1-204ENST00000525592 RTEL1-TNFRSF6BF6WH68 1400 aa31.62■■■□□ 2.65
TM9SF1-204ENST00000525592 A2MP01023 1474 aa31.62■■■□□ 2.65
TM9SF1-204ENST00000525592 ADGBQ8N7X0 1667 aa31.62■■■□□ 2.65
TM9SF1-204ENST00000525592 CCDC141Q6ZP82 1450 aa31.6■■■□□ 2.65
TM9SF1-204ENST00000525592 CNTLNQ9NXG0 1405 aa31.58■■■□□ 2.65
TM9SF1-204ENST00000525592 RSPH4AQ5TD94 716 aa31.58■■■□□ 2.65
TM9SF1-204ENST00000525592 ESF1Q9H501 851 aaKnown RBP31.58■■■□□ 2.65
TM9SF1-204ENST00000525592 KANK4Q5T7N3 995 aaPredicted RBP31.57■■■□□ 2.64
TM9SF1-204ENST00000525592 ARHGEF5Q12774 1597 aa31.56■■■□□ 2.64
TM9SF1-204ENST00000525592 PREX1Q8TCU6 1659 aa31.56■■■□□ 2.64
TM9SF1-204ENST00000525592 C3P01024 1663 aa31.54■■■□□ 2.64
TM9SF1-204ENST00000525592 CEBPAP49715 358 aaPredicted RBP31.53■■■□□ 2.64
TM9SF1-204ENST00000525592 APLP2Q06481 763 aa31.52■■■□□ 2.64
TM9SF1-204ENST00000525592 MROH2AA6NES4 1674 aa31.51■■■□□ 2.64
TM9SF1-204ENST00000525592 MYOM3Q5VTT5 1437 aa31.51■■■□□ 2.64
TM9SF1-204ENST00000525592 MIA2Q96PC5 1412 aa31.51■■■□□ 2.64
TM9SF1-204ENST00000525592 SETD1BQ9UPS6 1966 aaKnown RBP31.5■■■□□ 2.63
TM9SF1-204ENST00000525592 DHX29Q7Z478 1369 aaKnown RBP31.45■■■□□ 2.63
TM9SF1-204ENST00000525592 UHRF1BP1Q6BDS2 1440 aa31.44■■■□□ 2.62
TM9SF1-204ENST00000525592 HSPA2P54652 639 aa31.44■■■□□ 2.62
TM9SF1-204ENST00000525592 TSPY4P0CV99 314 aa31.41■■■□□ 2.62
TM9SF1-204ENST00000525592 TSPY10P0CW01 314 aa31.41■■■□□ 2.62
TM9SF1-204ENST00000525592 PPP6R1Q9UPN7 881 aa31.41■■■□□ 2.62
TM9SF1-204ENST00000525592 MAST1Q9Y2H9 1570 aa31.4■■■□□ 2.62
TM9SF1-204ENST00000525592 CLTCQ00610 1675 aaKnown RBP31.4■■■□□ 2.62
TM9SF1-204ENST00000525592 NPATQ14207 1427 aa31.39■■■□□ 2.62
TM9SF1-204ENST00000525592 ZMYM3Q14202 1370 aa31.38■■■□□ 2.61
TM9SF1-204ENST00000525592 GGT6Q6P531 493 aa31.37■■■□□ 2.61
TM9SF1-204ENST00000525592 FAM135AQ9P2D6 1515 aa31.34■■■□□ 2.61
TM9SF1-204ENST00000525592 PTPN23Q9H3S7 1636 aa31.31■■■□□ 2.6
TM9SF1-204ENST00000525592 KIF3BO15066 747 aa31.29■■■□□ 2.6
TM9SF1-204ENST00000525592 FGD6Q6ZV73 1430 aa31.27■■■□□ 2.6
TM9SF1-204ENST00000525592 KDM5DQ9BY66 1539 aa31.26■■■□□ 2.59
TM9SF1-204ENST00000525592 SHANK2Q9UPX8 1470 aa31.26■■■□□ 2.59
TM9SF1-204ENST00000525592 PTPRKQ15262 1439 aa31.25■■■□□ 2.59
TM9SF1-204ENST00000525592 TCOF1Q13428 1488 aaKnown RBP31.25■■■□□ 2.59
TM9SF1-204ENST00000525592 CROCC2H7BZ55 1655 aa31.25■■■□□ 2.59
TM9SF1-204ENST00000525592 EIF2AK4Q9P2K8 1649 aaKnown RBP31.24■■■□□ 2.59
TM9SF1-204ENST00000525592 RNF17Q9BXT8 1623 aaKnown RBP31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms