RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 ARHGAP5Q13017 1502 aa18.01■□□□□ 0.47
TRAPPC4-204ENST00000524797 CDC42BPAQ5VT25 1732 aa18.01■□□□□ 0.47
TRAPPC4-204ENST00000524797 SCAPERQ9BY12 1400 aa18■□□□□ 0.47
TRAPPC4-204ENST00000524797 EFCAB2Q5VUJ9 269 aa18■□□□□ 0.47
TRAPPC4-204ENST00000524797 POGZQ7Z3K3 1410 aa18■□□□□ 0.47
TRAPPC4-204ENST00000524797 ZFYVE16Q7Z3T8 1539 aa17.98■□□□□ 0.47
TRAPPC4-204ENST00000524797 ADAMTSL3P82987 1691 aa17.98■□□□□ 0.47
TRAPPC4-204ENST00000524797 BCORL1Q5H9F3 1711 aa17.98■□□□□ 0.47
TRAPPC4-204ENST00000524797 MAGI2Q86UL8 1455 aa17.96■□□□□ 0.47
TRAPPC4-204ENST00000524797 YEATS2Q9ULM3 1422 aa17.94■□□□□ 0.46
TRAPPC4-204ENST00000524797 ITSN2Q9NZM3 1697 aa17.94■□□□□ 0.46
TRAPPC4-204ENST00000524797 LOC105371045A0A1W2PR82 267 aa17.94■□□□□ 0.46
TRAPPC4-204ENST00000524797 SIGLEC1Q9BZZ2 1709 aa17.94■□□□□ 0.46
TRAPPC4-204ENST00000524797 ABCC1P33527 1531 aa17.93■□□□□ 0.46
TRAPPC4-204ENST00000524797 KDM5CP41229 1560 aa17.92■□□□□ 0.46
TRAPPC4-204ENST00000524797 ZNF518AQ6AHZ1 1483 aa17.91■□□□□ 0.46
TRAPPC4-204ENST00000524797 MADDQ8WXG6 1647 aa17.91■□□□□ 0.46
TRAPPC4-204ENST00000524797 EHBP1L1Q8N3D4 1523 aa17.9■□□□□ 0.46
TRAPPC4-204ENST00000524797 ARID4BQ4LE39 1312 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC4-204ENST00000524797 HECW2Q9P2P5 1572 aa17.89■□□□□ 0.45
TRAPPC4-204ENST00000524797 ARHGEF12Q9NZN5 1544 aa17.89■□□□□ 0.45
TRAPPC4-204ENST00000524797 GPATCH8Q9UKJ3 1502 aaKnown RBP17.89■□□□□ 0.45
TRAPPC4-204ENST00000524797 SAMD9LQ8IVG5 1584 aa17.88■□□□□ 0.45
TRAPPC4-204ENST00000524797 MTUS2Q5JR59 1369 aa17.88■□□□□ 0.45
TRAPPC4-204ENST00000524797 RIMS1Q86UR5 1692 aaKnown RBP17.87■□□□□ 0.45
TRAPPC4-204ENST00000524797 ATP10AO60312 1499 aa17.86■□□□□ 0.45
TRAPPC4-204ENST00000524797 PTPRMP28827 1452 aa17.86■□□□□ 0.45
TRAPPC4-204ENST00000524797 AFAP1Q8N556 730 aa17.85■□□□□ 0.45
TRAPPC4-204ENST00000524797 C9orf84Q5VXU9 1444 aa17.85■□□□□ 0.45
TRAPPC4-204ENST00000524797 TRAPPC8Q9Y2L5 1435 aa17.85■□□□□ 0.45
TRAPPC4-204ENST00000524797 TIAM1Q13009 1591 aa17.85■□□□□ 0.45
TRAPPC4-204ENST00000524797 DIP2CQ9Y2E4 1556 aa17.85■□□□□ 0.45
TRAPPC4-204ENST00000524797 ABCA6Q8N139 1617 aa17.85■□□□□ 0.45
TRAPPC4-204ENST00000524797 VPS8Q8N3P4 1428 aa17.84■□□□□ 0.45
TRAPPC4-204ENST00000524797 CCNB3Q8WWL7 1395 aa17.84■□□□□ 0.45
TRAPPC4-204ENST00000524797 MLH3Q9UHC1 1453 aa17.83■□□□□ 0.44
TRAPPC4-204ENST00000524797 FER1L4A9Z1Z3 1794 aa17.82■□□□□ 0.44
TRAPPC4-204ENST00000524797 SYCP2Q9BX26 1530 aa17.82■□□□□ 0.44
TRAPPC4-204ENST00000524797 KIDINS220Q9ULH0 1771 aa17.82■□□□□ 0.44
TRAPPC4-204ENST00000524797 SUPT6HQ7KZ85 1726 aaKnown RBP17.81■□□□□ 0.44
TRAPPC4-204ENST00000524797 REREQ9P2R6 1566 aa17.81■□□□□ 0.44
TRAPPC4-204ENST00000524797 ZNF777Q9ULD5 760 aaPredicted RBP17.8■□□□□ 0.44
TRAPPC4-204ENST00000524797 PLEKHH2Q8IVE3 1493 aa17.79■□□□□ 0.44
TRAPPC4-204ENST00000524797 CFDP1Q9UEE9 299 aaPredicted RBP17.78■□□□□ 0.44
TRAPPC4-204ENST00000524797 MYT1LQ9UL68 1186 aa17.78■□□□□ 0.44
TRAPPC4-204ENST00000524797 KIAA1107Q9UPP5 1409 aa17.77■□□□□ 0.44
TRAPPC4-204ENST00000524797 NCOA2Q15596 1464 aa17.76■□□□□ 0.43
TRAPPC4-204ENST00000524797 MLECQ14165 292 aa17.76■□□□□ 0.43
TRAPPC4-204ENST00000524797 HNRNPMP52272 730 aaKnown RBP eCLIP17.74■□□□□ 0.43
TRAPPC4-204ENST00000524797 MAP3K1Q13233 1512 aa17.74■□□□□ 0.43
TRAPPC4-204ENST00000524797 INO80Q9ULG1 1556 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC4-204ENST00000524797 AGLP35573 1532 aa17.73■□□□□ 0.43
TRAPPC4-204ENST00000524797 LRRC9Q6ZRR7 1453 aa17.73■□□□□ 0.43
TRAPPC4-204ENST00000524797 ATP7AQ04656 1500 aa17.73■□□□□ 0.43
TRAPPC4-204ENST00000524797 SPAG9O60271 1321 aaKnown RBP17.71■□□□□ 0.42
TRAPPC4-204ENST00000524797 ZNF644Q9H582 1327 aaPredicted RBP17.71■□□□□ 0.42
TRAPPC4-204ENST00000524797 MBD5Q9P267 1494 aa17.69■□□□□ 0.42
TRAPPC4-204ENST00000524797 CAMSAP2Q08AD1 1489 aa17.68■□□□□ 0.42
TRAPPC4-204ENST00000524797 ADGBQ8N7X0 1667 aa17.68■□□□□ 0.42
TRAPPC4-204ENST00000524797 PLPPR3Q6T4P5 718 aa17.66■□□□□ 0.42
TRAPPC4-204ENST00000524797 PLXNC1O60486 1568 aa17.66■□□□□ 0.42
TRAPPC4-204ENST00000524797 KANK4Q5T7N3 995 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC4-204ENST00000524797 LMTK3Q96Q04 1460 aa17.65■□□□□ 0.42
TRAPPC4-204ENST00000524797 C3P01024 1663 aa17.64■□□□□ 0.41
TRAPPC4-204ENST00000524797 A2MP01023 1474 aa17.63■□□□□ 0.41
TRAPPC4-204ENST00000524797 ARHGEF5Q12774 1597 aa17.63■□□□□ 0.41
TRAPPC4-204ENST00000524797 CCDC141Q6ZP82 1450 aa17.63■□□□□ 0.41
TRAPPC4-204ENST00000524797 PREX1Q8TCU6 1659 aa17.62■□□□□ 0.41
TRAPPC4-204ENST00000524797 RTEL1-TNFRSF6BF6WH68 1400 aa17.61■□□□□ 0.41
TRAPPC4-204ENST00000524797 MROH2AA6NES4 1674 aa17.6■□□□□ 0.41
TRAPPC4-204ENST00000524797 CEBPAP49715 358 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC4-204ENST00000524797 MYOM3Q5VTT5 1437 aa17.58■□□□□ 0.41
TRAPPC4-204ENST00000524797 SETD1BQ9UPS6 1966 aaKnown RBP17.57■□□□□ 0.4
TRAPPC4-204ENST00000524797 CNTLNQ9NXG0 1405 aa17.57■□□□□ 0.4
TRAPPC4-204ENST00000524797 CLTCQ00610 1675 aaKnown RBP17.57■□□□□ 0.4
TRAPPC4-204ENST00000524797 APLP2Q06481 763 aa17.57■□□□□ 0.4
TRAPPC4-204ENST00000524797 RSPH4AQ5TD94 716 aa17.57■□□□□ 0.4
TRAPPC4-204ENST00000524797 MIA2Q96PC5 1412 aa17.57■□□□□ 0.4
TRAPPC4-204ENST00000524797 ESF1Q9H501 851 aaKnown RBP17.55■□□□□ 0.4
TRAPPC4-204ENST00000524797 MAST1Q9Y2H9 1570 aa17.55■□□□□ 0.4
TRAPPC4-204ENST00000524797 DHX29Q7Z478 1369 aaKnown RBP17.53■□□□□ 0.4
TRAPPC4-204ENST00000524797 HSPA2P54652 639 aa17.52■□□□□ 0.4
TRAPPC4-204ENST00000524797 PTPN23Q9H3S7 1636 aa17.52■□□□□ 0.39
TRAPPC4-204ENST00000524797 CROCC2H7BZ55 1655 aa17.5■□□□□ 0.39
TRAPPC4-204ENST00000524797 UHRF1BP1Q6BDS2 1440 aa17.49■□□□□ 0.39
TRAPPC4-204ENST00000524797 TSPY4P0CV99 314 aa17.49■□□□□ 0.39
TRAPPC4-204ENST00000524797 TSPY10P0CW01 314 aa17.49■□□□□ 0.39
TRAPPC4-204ENST00000524797 GGT6Q6P531 493 aa17.49■□□□□ 0.39
TRAPPC4-204ENST00000524797 ZMYM3Q14202 1370 aa17.47■□□□□ 0.39
TRAPPC4-204ENST00000524797 PPP6R1Q9UPN7 881 aa17.46■□□□□ 0.39
TRAPPC4-204ENST00000524797 NPATQ14207 1427 aa17.46■□□□□ 0.39
TRAPPC4-204ENST00000524797 FGD6Q6ZV73 1430 aa17.46■□□□□ 0.39
TRAPPC4-204ENST00000524797 TCOF1Q13428 1488 aaKnown RBP17.46■□□□□ 0.39
TRAPPC4-204ENST00000524797 FAM135AQ9P2D6 1515 aa17.45■□□□□ 0.38
TRAPPC4-204ENST00000524797 STRCQ7RTU9 1775 aa17.45■□□□□ 0.38
TRAPPC4-204ENST00000524797 DNMT1P26358 1616 aaKnown RBP17.45■□□□□ 0.38
TRAPPC4-204ENST00000524797 EIF2AK4Q9P2K8 1649 aaKnown RBP17.45■□□□□ 0.38
TRAPPC4-204ENST00000524797 RNF17Q9BXT8 1623 aaKnown RBP17.44■□□□□ 0.38
TRAPPC4-204ENST00000524797 KIF3BO15066 747 aa17.44■□□□□ 0.38
TRAPPC4-204ENST00000524797 SHANK2Q9UPX8 1470 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms