RNA–Protein interactions for RNA: ENST00000524762.5

UBXN1-204, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 763 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-204ENST00000524762 ZMYM4Q5VZL5 1548 aa30.44■■■□□ 2.46
UBXN1-204ENST00000524762 CDC42BPAQ5VT25 1732 aa30.43■■■□□ 2.46
UBXN1-204ENST00000524762 EFCAB2Q5VUJ9 269 aa30.41■■■□□ 2.46
UBXN1-204ENST00000524762 ARHGEF40Q8TER5 1519 aa30.41■■■□□ 2.46
UBXN1-204ENST00000524762 POGZQ7Z3K3 1410 aa30.4■■■□□ 2.46
UBXN1-204ENST00000524762 SCAPERQ9BY12 1400 aa30.4■■■□□ 2.46
UBXN1-204ENST00000524762 VPS8Q8N3P4 1428 aa30.38■■■□□ 2.45
UBXN1-204ENST00000524762 EHBP1L1Q8N3D4 1523 aa30.36■■■□□ 2.45
UBXN1-204ENST00000524762 MTUS2Q5JR59 1369 aa30.34■■■□□ 2.45
UBXN1-204ENST00000524762 ABCC1P33527 1531 aa30.32■■■□□ 2.44
UBXN1-204ENST00000524762 MAGI2Q86UL8 1455 aa30.31■■■□□ 2.44
UBXN1-204ENST00000524762 ZFYVE16Q7Z3T8 1539 aa30.31■■■□□ 2.44
UBXN1-204ENST00000524762 TIAM1Q13009 1591 aa30.3■■■□□ 2.44
UBXN1-204ENST00000524762 GPATCH8Q9UKJ3 1502 aaKnown RBP30.3■■■□□ 2.44
UBXN1-204ENST00000524762 KDM5CP41229 1560 aa30.29■■■□□ 2.44
UBXN1-204ENST00000524762 ITSN2Q9NZM3 1697 aa30.29■■■□□ 2.44
UBXN1-204ENST00000524762 ZNF518AQ6AHZ1 1483 aa30.28■■■□□ 2.44
UBXN1-204ENST00000524762 YEATS2Q9ULM3 1422 aa30.28■■■□□ 2.44
UBXN1-204ENST00000524762 SAMD9LQ8IVG5 1584 aa30.25■■■□□ 2.43
UBXN1-204ENST00000524762 ARHGEF12Q9NZN5 1544 aa30.25■■■□□ 2.43
UBXN1-204ENST00000524762 SIGLEC1Q9BZZ2 1709 aa30.23■■■□□ 2.43
UBXN1-204ENST00000524762 BCORL1Q5H9F3 1711 aa30.22■■■□□ 2.43
UBXN1-204ENST00000524762 ADAMTSL3P82987 1691 aa30.21■■■□□ 2.43
UBXN1-204ENST00000524762 CCNB3Q8WWL7 1395 aa30.21■■■□□ 2.43
UBXN1-204ENST00000524762 HECW2Q9P2P5 1572 aa30.2■■■□□ 2.43
UBXN1-204ENST00000524762 SUPT6HQ7KZ85 1726 aaKnown RBP30.19■■■□□ 2.42
UBXN1-204ENST00000524762 MAP3K1Q13233 1512 aa30.18■■■□□ 2.42
UBXN1-204ENST00000524762 TRAPPC8Q9Y2L5 1435 aa30.18■■■□□ 2.42
UBXN1-204ENST00000524762 AFAP1Q8N556 730 aa30.17■■■□□ 2.42
UBXN1-204ENST00000524762 SYCP2Q9BX26 1530 aa30.16■■■□□ 2.42
UBXN1-204ENST00000524762 NCOA2Q15596 1464 aa30.14■■■□□ 2.42
UBXN1-204ENST00000524762 LRRC9Q6ZRR7 1453 aa30.14■■■□□ 2.42
UBXN1-204ENST00000524762 MLH3Q9UHC1 1453 aa30.13■■■□□ 2.41
UBXN1-204ENST00000524762 ATP10AO60312 1499 aa30.12■■■□□ 2.41
UBXN1-204ENST00000524762 DIP2CQ9Y2E4 1556 aa30.12■■■□□ 2.41
UBXN1-204ENST00000524762 CFDP1Q9UEE9 299 aaPredicted RBP30.12■■■□□ 2.41
UBXN1-204ENST00000524762 C9orf84Q5VXU9 1444 aa30.11■■■□□ 2.41
UBXN1-204ENST00000524762 PLEKHH2Q8IVE3 1493 aa30.11■■■□□ 2.41
UBXN1-204ENST00000524762 ABCA6Q8N139 1617 aa30.11■■■□□ 2.41
UBXN1-204ENST00000524762 ZNF777Q9ULD5 760 aaPredicted RBP30.1■■■□□ 2.41
UBXN1-204ENST00000524762 ARID4BQ4LE39 1312 aaPredicted RBP30.1■■■□□ 2.41
UBXN1-204ENST00000524762 KIAA1107Q9UPP5 1409 aa30.1■■■□□ 2.41
UBXN1-204ENST00000524762 MADDQ8WXG6 1647 aa30.1■■■□□ 2.41
UBXN1-204ENST00000524762 KIDINS220Q9ULH0 1771 aa30.08■■■□□ 2.41
UBXN1-204ENST00000524762 REREQ9P2R6 1566 aa30.07■■■□□ 2.4
UBXN1-204ENST00000524762 PTPRMP28827 1452 aa30.01■■■□□ 2.4
UBXN1-204ENST00000524762 HNRNPMP52272 730 aaKnown RBP eCLIP30.01■■■□□ 2.39
UBXN1-204ENST00000524762 KANK4Q5T7N3 995 aaPredicted RBP30.01■■■□□ 2.39
UBXN1-204ENST00000524762 INO80Q9ULG1 1556 aaPredicted RBP30■■■□□ 2.39
UBXN1-204ENST00000524762 RIMS1Q86UR5 1692 aaKnown RBP30■■■□□ 2.39
UBXN1-204ENST00000524762 ZNF644Q9H582 1327 aaPredicted RBP29.98■■■□□ 2.39
UBXN1-204ENST00000524762 MBD5Q9P267 1494 aa29.98■■■□□ 2.39
UBXN1-204ENST00000524762 MYT1LQ9UL68 1186 aa29.97■■■□□ 2.39
UBXN1-204ENST00000524762 ATP7AQ04656 1500 aa29.96■■■□□ 2.39
UBXN1-204ENST00000524762 FER1L4A9Z1Z3 1794 aa29.96■■■□□ 2.39
UBXN1-204ENST00000524762 CAMSAP2Q08AD1 1489 aa29.96■■■□□ 2.39
UBXN1-204ENST00000524762 AGLP35573 1532 aa29.93■■■□□ 2.38
UBXN1-204ENST00000524762 SPAG9O60271 1321 aaKnown RBP29.93■■■□□ 2.38
UBXN1-204ENST00000524762 MLECQ14165 292 aa29.88■■■□□ 2.37
UBXN1-204ENST00000524762 MYOM3Q5VTT5 1437 aa29.87■■■□□ 2.37
UBXN1-204ENST00000524762 ARHGEF5Q12774 1597 aa29.86■■■□□ 2.37
UBXN1-204ENST00000524762 APLP2Q06481 763 aa29.86■■■□□ 2.37
UBXN1-204ENST00000524762 CCDC141Q6ZP82 1450 aa29.86■■■□□ 2.37
UBXN1-204ENST00000524762 PLXNC1O60486 1568 aa29.86■■■□□ 2.37
UBXN1-204ENST00000524762 ADGBQ8N7X0 1667 aa29.83■■■□□ 2.37
UBXN1-204ENST00000524762 MIA2Q96PC5 1412 aa29.83■■■□□ 2.37
UBXN1-204ENST00000524762 RTEL1-TNFRSF6BF6WH68 1400 aa29.82■■■□□ 2.36
UBXN1-204ENST00000524762 A2MP01023 1474 aa29.8■■■□□ 2.36
UBXN1-204ENST00000524762 RSPH4AQ5TD94 716 aa29.76■■■□□ 2.35
UBXN1-204ENST00000524762 MAST1Q9Y2H9 1570 aa29.72■■■□□ 2.35
UBXN1-204ENST00000524762 PTPN23Q9H3S7 1636 aa29.71■■■□□ 2.35
UBXN1-204ENST00000524762 C3P01024 1663 aa29.68■■■□□ 2.34
UBXN1-204ENST00000524762 LMTK3Q96Q04 1460 aa29.68■■■□□ 2.34
UBXN1-204ENST00000524762 FGD6Q6ZV73 1430 aa29.67■■■□□ 2.34
UBXN1-204ENST00000524762 TCOF1Q13428 1488 aaKnown RBP29.66■■■□□ 2.34
UBXN1-204ENST00000524762 DHX29Q7Z478 1369 aaKnown RBP29.65■■■□□ 2.34
UBXN1-204ENST00000524762 MROH2AA6NES4 1674 aa29.65■■■□□ 2.34
UBXN1-204ENST00000524762 CROCC2H7BZ55 1655 aa29.65■■■□□ 2.34
UBXN1-204ENST00000524762 CNTLNQ9NXG0 1405 aa29.64■■■□□ 2.34
UBXN1-204ENST00000524762 PLPPR3Q6T4P5 718 aa29.64■■■□□ 2.34
UBXN1-204ENST00000524762 TSPY4P0CV99 314 aa29.62■■■□□ 2.33
UBXN1-204ENST00000524762 TSPY10P0CW01 314 aa29.62■■■□□ 2.33
UBXN1-204ENST00000524762 PREX1Q8TCU6 1659 aa29.6■■■□□ 2.33
UBXN1-204ENST00000524762 CEBPAP49715 358 aaPredicted RBP29.6■■■□□ 2.33
UBXN1-204ENST00000524762 DNMT1P26358 1616 aaKnown RBP29.6■■■□□ 2.33
UBXN1-204ENST00000524762 CLTCQ00610 1675 aaKnown RBP29.6■■■□□ 2.33
UBXN1-204ENST00000524762 SHANK2Q9UPX8 1470 aa29.58■■■□□ 2.33
UBXN1-204ENST00000524762 ESF1Q9H501 851 aaKnown RBP29.57■■■□□ 2.32
UBXN1-204ENST00000524762 ABCC5O15440 1437 aa29.56■■■□□ 2.32
UBXN1-204ENST00000524762 DAPK1P53355 1430 aa29.54■■■□□ 2.32
UBXN1-204ENST00000524762 GGT6Q6P531 493 aa29.52■■■□□ 2.32
UBXN1-204ENST00000524762 EIF2AK4Q9P2K8 1649 aaKnown RBP29.51■■■□□ 2.31
UBXN1-204ENST00000524762 PPP6R1Q9UPN7 881 aa29.5■■■□□ 2.31
UBXN1-204ENST00000524762 FAM135AQ9P2D6 1515 aa29.5■■■□□ 2.31
UBXN1-204ENST00000524762 SETD1BQ9UPS6 1966 aaKnown RBP29.5■■■□□ 2.31
UBXN1-204ENST00000524762 RNF17Q9BXT8 1623 aaKnown RBP29.49■■■□□ 2.31
UBXN1-204ENST00000524762 ZMYM3Q14202 1370 aa29.49■■■□□ 2.31
UBXN1-204ENST00000524762 KIF3BO15066 747 aa29.48■■■□□ 2.31
UBXN1-204ENST00000524762 DUOX2Q9NRD8 1548 aa29.47■■■□□ 2.31
UBXN1-204ENST00000524762 NPATQ14207 1427 aa29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms