RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 CDK13Q14004 1512 aaKnown RBP11.16□□□□□ -0.62
VPS11-201ENST00000524454 CFAP43Q8NDM7 1665 aa11.16□□□□□ -0.62
VPS11-201ENST00000524454 ATP1B4Q9UN42 357 aaPredicted RBP11.15□□□□□ -0.62
VPS11-201ENST00000524454 HECW1Q76N89 1606 aa11.13□□□□□ -0.63
VPS11-201ENST00000524454 PCF11O94913 1555 aaKnown RBP11.13□□□□□ -0.63
VPS11-201ENST00000524454 ABCB7O75027 752 aa11.13□□□□□ -0.63
VPS11-201ENST00000524454 ABCA9Q8IUA7 1624 aa11.12□□□□□ -0.63
VPS11-201ENST00000524454 CD109Q6YHK3 1445 aa11.11□□□□□ -0.63
VPS11-201ENST00000524454 COL17A1Q9UMD9 1497 aaPredicted RBP11.11□□□□□ -0.63
VPS11-201ENST00000524454 FMN1Q68DA7 1419 aa11.1□□□□□ -0.63
VPS11-201ENST00000524454 TEX14Q8IWB6 1497 aa11.1□□□□□ -0.63
VPS11-201ENST00000524454 CLIP1P30622 1438 aa11.09□□□□□ -0.63
VPS11-201ENST00000524454 TTC37Q6PGP7 1564 aa11.09□□□□□ -0.63
VPS11-201ENST00000524454 MAGI3Q5TCQ9 1506 aa11.08□□□□□ -0.64
VPS11-201ENST00000524454 KIF14Q15058 1648 aa11.07□□□□□ -0.64
VPS11-201ENST00000524454 POLA2Q14181 598 aa11.07□□□□□ -0.64
VPS11-201ENST00000524454 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.06□□□□□ -0.64
VPS11-201ENST00000524454 PLEKHD1A6NEE1 506 aa11.06□□□□□ -0.64
VPS11-201ENST00000524454 VPS8Q8N3P4 1428 aa11.03□□□□□ -0.64
VPS11-201ENST00000524454 CASKIN1Q8WXD9 1431 aa11.03□□□□□ -0.64
VPS11-201ENST00000524454 MYO5CQ9NQX4 1742 aa11.02□□□□□ -0.65
VPS11-201ENST00000524454 TRIM26Q12899 539 aaPredicted RBP11.02□□□□□ -0.65
VPS11-201ENST00000524454 FYCO1Q9BQS8 1478 aa11.01□□□□□ -0.65
VPS11-201ENST00000524454 FRMPD1Q5SYB0 1578 aa11□□□□□ -0.65
VPS11-201ENST00000524454 CCDC18Q5T9S5 1454 aa11□□□□□ -0.65
VPS11-201ENST00000524454 TROQ12816 1431 aaPredicted RBP10.99□□□□□ -0.65
VPS11-201ENST00000524454 FANCAO15360 1455 aa10.99□□□□□ -0.65
VPS11-201ENST00000524454 ARAP3Q8WWN8 1544 aa10.99□□□□□ -0.65
VPS11-201ENST00000524454 CFAP74Q9C0B2 1584 aa10.99□□□□□ -0.65
VPS11-201ENST00000524454 NEO1Q92859 1461 aa10.98□□□□□ -0.65
VPS11-201ENST00000524454 RICTORQ6R327 1708 aa10.98□□□□□ -0.65
VPS11-201ENST00000524454 RAPGEF3O95398 923 aa10.97□□□□□ -0.65
VPS11-201ENST00000524454 CDC42BPBQ9Y5S2 1711 aa10.97□□□□□ -0.65
VPS11-201ENST00000524454 CDC42BPAQ5VT25 1732 aa10.96□□□□□ -0.65
VPS11-201ENST00000524454 AKNAQ7Z591 1439 aa10.96□□□□□ -0.65
VPS11-201ENST00000524454 CDK11AQ9UQ88 783 aaPredicted RBP10.96□□□□□ -0.65
VPS11-201ENST00000524454 KDM4FA0A1W2PPD8 638 aa10.95□□□□□ -0.66
VPS11-201ENST00000524454 PREX2Q70Z35 1606 aa10.95□□□□□ -0.66
VPS11-201ENST00000524454 ARHGAP5Q13017 1502 aa10.94□□□□□ -0.66
VPS11-201ENST00000524454 MAP3K1Q13233 1512 aa10.94□□□□□ -0.66
VPS11-201ENST00000524454 ADGRL1O94910 1474 aa10.94□□□□□ -0.66
VPS11-201ENST00000524454 PLCH2O75038 1416 aa10.94□□□□□ -0.66
VPS11-201ENST00000524454 DENND4BO75064 1496 aaPredicted RBP10.93□□□□□ -0.66
VPS11-201ENST00000524454 PHLDB1Q86UU1 1377 aa10.91□□□□□ -0.66
VPS11-201ENST00000524454 SIGLEC1Q9BZZ2 1709 aa10.91□□□□□ -0.66
VPS11-201ENST00000524454 SCAPERQ9BY12 1400 aa10.91□□□□□ -0.66
VPS11-201ENST00000524454 ARHGEF40Q8TER5 1519 aa10.89□□□□□ -0.67
VPS11-201ENST00000524454 ITSN2Q9NZM3 1697 aa10.89□□□□□ -0.67
VPS11-201ENST00000524454 MKRN4PQ13434 485 aaPredicted RBP10.89□□□□□ -0.67
VPS11-201ENST00000524454 YEATS2Q9ULM3 1422 aa10.89□□□□□ -0.67
VPS11-201ENST00000524454 TIAM1Q13009 1591 aa10.89□□□□□ -0.67
VPS11-201ENST00000524454 MTUS2Q5JR59 1369 aa10.89□□□□□ -0.67
VPS11-201ENST00000524454 EHBP1L1Q8N3D4 1523 aa10.89□□□□□ -0.67
VPS11-201ENST00000524454 EFCAB2Q5VUJ9 269 aa10.88□□□□□ -0.67
VPS11-201ENST00000524454 POGZQ7Z3K3 1410 aa10.88□□□□□ -0.67
VPS11-201ENST00000524454 PCGF6Q9BYE7 350 aa10.88□□□□□ -0.67
VPS11-201ENST00000524454 ZMYM4Q5VZL5 1548 aa10.88□□□□□ -0.67
VPS11-201ENST00000524454 SAMD9LQ8IVG5 1584 aa10.87□□□□□ -0.67
VPS11-201ENST00000524454 ABCC1P33527 1531 aa10.87□□□□□ -0.67
VPS11-201ENST00000524454 ZFYVE16Q7Z3T8 1539 aa10.87□□□□□ -0.67
VPS11-201ENST00000524454 ARHGEF12Q9NZN5 1544 aa10.87□□□□□ -0.67
VPS11-201ENST00000524454 GPATCH8Q9UKJ3 1502 aaKnown RBP10.86□□□□□ -0.67
VPS11-201ENST00000524454 ZNF777Q9ULD5 760 aaPredicted RBP10.86□□□□□ -0.67
VPS11-201ENST00000524454 SUPT6HQ7KZ85 1726 aaKnown RBP10.85□□□□□ -0.67
VPS11-201ENST00000524454 TRAPPC8Q9Y2L5 1435 aa10.84□□□□□ -0.67
VPS11-201ENST00000524454 SYCP2Q9BX26 1530 aa10.84□□□□□ -0.67
VPS11-201ENST00000524454 BCORL1Q5H9F3 1711 aa10.84□□□□□ -0.67
VPS11-201ENST00000524454 AFAP1Q8N556 730 aa10.84□□□□□ -0.67
VPS11-201ENST00000524454 CCNB3Q8WWL7 1395 aa10.84□□□□□ -0.67
VPS11-201ENST00000524454 KDM5CP41229 1560 aa10.84□□□□□ -0.67
VPS11-201ENST00000524454 HECW2Q9P2P5 1572 aa10.84□□□□□ -0.67
VPS11-201ENST00000524454 ARID4BQ4LE39 1312 aaPredicted RBP10.84□□□□□ -0.67
VPS11-201ENST00000524454 ADAMTSL3P82987 1691 aa10.83□□□□□ -0.68
VPS11-201ENST00000524454 ZNF518AQ6AHZ1 1483 aa10.83□□□□□ -0.68
VPS11-201ENST00000524454 ZBTB12Q9Y330 459 aaPredicted RBP10.83□□□□□ -0.68
VPS11-201ENST00000524454 ABCA6Q8N139 1617 aa10.83□□□□□ -0.68
VPS11-201ENST00000524454 MADDQ8WXG6 1647 aa10.83□□□□□ -0.68
VPS11-201ENST00000524454 NCOA2Q15596 1464 aa10.82□□□□□ -0.68
VPS11-201ENST00000524454 MYT1LQ9UL68 1186 aa10.82□□□□□ -0.68
VPS11-201ENST00000524454 RIMS1Q86UR5 1692 aaKnown RBP10.82□□□□□ -0.68
VPS11-201ENST00000524454 DIP2CQ9Y2E4 1556 aa10.82□□□□□ -0.68
VPS11-201ENST00000524454 LRRC9Q6ZRR7 1453 aa10.81□□□□□ -0.68
VPS11-201ENST00000524454 KIDINS220Q9ULH0 1771 aa10.81□□□□□ -0.68
VPS11-201ENST00000524454 HNRNPMP52272 730 aaKnown RBP eCLIP10.81□□□□□ -0.68
VPS11-201ENST00000524454 KANK4Q5T7N3 995 aaPredicted RBP10.81□□□□□ -0.68
VPS11-201ENST00000524454 ZNF644Q9H582 1327 aaPredicted RBP10.81□□□□□ -0.68
VPS11-201ENST00000524454 MLECQ14165 292 aa10.8□□□□□ -0.68
VPS11-201ENST00000524454 CFDP1Q9UEE9 299 aaPredicted RBP10.8□□□□□ -0.68
VPS11-201ENST00000524454 MAGI2Q86UL8 1455 aa10.8□□□□□ -0.68
VPS11-201ENST00000524454 FER1L4A9Z1Z3 1794 aa10.79□□□□□ -0.68
VPS11-201ENST00000524454 ATP10AO60312 1499 aa10.79□□□□□ -0.68
VPS11-201ENST00000524454 C9orf84Q5VXU9 1444 aa10.77□□□□□ -0.68
VPS11-201ENST00000524454 HRCP23327 699 aa10.77□□□□□ -0.69
VPS11-201ENST00000524454 INO80Q9ULG1 1556 aaPredicted RBP10.77□□□□□ -0.69
VPS11-201ENST00000524454 CAMSAP2Q08AD1 1489 aa10.76□□□□□ -0.69
VPS11-201ENST00000524454 MLH3Q9UHC1 1453 aa10.76□□□□□ -0.69
VPS11-201ENST00000524454 PTPRMP28827 1452 aa10.75□□□□□ -0.69
VPS11-201ENST00000524454 ATP7AQ04656 1500 aa10.75□□□□□ -0.69
VPS11-201ENST00000524454 PLEKHH2Q8IVE3 1493 aa10.74□□□□□ -0.69
VPS11-201ENST00000524454 RRBP1Q9P2E9 1410 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 389.5 ms