RNA–Protein interactions for RNA: ENST00000524379.1

LMO1-203, Transcript of LIM domain only 1, humanhuman

TSL 1 (best)

Gene LMO1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-203ENST00000524379 ARAP3Q8WWN8 1544 aa29.1■■■□□ 2.25
LMO1-203ENST00000524379 CCNB3Q8WWL7 1395 aa29.09■■■□□ 2.25
LMO1-203ENST00000524379 PHLDB1Q86UU1 1377 aa29.08■■■□□ 2.25
LMO1-203ENST00000524379 COL17A1Q9UMD9 1497 aaPredicted RBP29.08■■■□□ 2.25
LMO1-203ENST00000524379 ARHGAP5Q13017 1502 aa29.04■■■□□ 2.24
LMO1-203ENST00000524379 FANCAO15360 1455 aa29.04■■■□□ 2.24
LMO1-203ENST00000524379 NEO1Q92859 1461 aa29.02■■■□□ 2.24
LMO1-203ENST00000524379 ITSN2Q9NZM3 1697 aa29.02■■■□□ 2.24
LMO1-203ENST00000524379 MYOM3Q5VTT5 1437 aa29.01■■■□□ 2.23
LMO1-203ENST00000524379 SAMD9LQ8IVG5 1584 aa28.98■■■□□ 2.23
LMO1-203ENST00000524379 AKNAQ7Z591 1439 aa28.98■■■□□ 2.23
LMO1-203ENST00000524379 EFCAB2Q5VUJ9 269 aa28.97■■■□□ 2.23
LMO1-203ENST00000524379 CFAP74Q9C0B2 1584 aa28.96■■■□□ 2.23
LMO1-203ENST00000524379 CFDP1Q9UEE9 299 aaPredicted RBP28.96■■■□□ 2.23
LMO1-203ENST00000524379 ZNF644Q9H582 1327 aaPredicted RBP28.94■■■□□ 2.22
LMO1-203ENST00000524379 ARHGEF12Q9NZN5 1544 aa28.94■■■□□ 2.22
LMO1-203ENST00000524379 ABCC1P33527 1531 aa28.93■■■□□ 2.22
LMO1-203ENST00000524379 FGD6Q6ZV73 1430 aa28.91■■■□□ 2.22
LMO1-203ENST00000524379 MIA2Q96PC5 1412 aa28.91■■■□□ 2.22
LMO1-203ENST00000524379 ADGRL1O94910 1474 aa28.91■■■□□ 2.22
LMO1-203ENST00000524379 ZNF777Q9ULD5 760 aaPredicted RBP28.9■■■□□ 2.22
LMO1-203ENST00000524379 CAMSAP2Q08AD1 1489 aa28.88■■■□□ 2.21
LMO1-203ENST00000524379 SCAPERQ9BY12 1400 aa28.87■■■□□ 2.21
LMO1-203ENST00000524379 FRMPD1Q5SYB0 1578 aa28.87■■■□□ 2.21
LMO1-203ENST00000524379 SYCP2Q9BX26 1530 aa28.85■■■□□ 2.21
LMO1-203ENST00000524379 PTPN23Q9H3S7 1636 aa28.84■■■□□ 2.21
LMO1-203ENST00000524379 TCOF1Q13428 1488 aaKnown RBP28.84■■■□□ 2.21
LMO1-203ENST00000524379 KIAA1107Q9UPP5 1409 aa28.83■■■□□ 2.21
LMO1-203ENST00000524379 MBD5Q9P267 1494 aa28.83■■■□□ 2.21
LMO1-203ENST00000524379 POGZQ7Z3K3 1410 aa28.82■■■□□ 2.2
LMO1-203ENST00000524379 TRAPPC8Q9Y2L5 1435 aa28.82■■■□□ 2.2
LMO1-203ENST00000524379 RICTORQ6R327 1708 aa28.81■■■□□ 2.2
LMO1-203ENST00000524379 DENND4BO75064 1496 aaPredicted RBP28.81■■■□□ 2.2
LMO1-203ENST00000524379 RAPGEF3O95398 923 aa28.81■■■□□ 2.2
LMO1-203ENST00000524379 PLEKHH2Q8IVE3 1493 aa28.8■■■□□ 2.2
LMO1-203ENST00000524379 HNRNPMP52272 730 aaKnown RBP eCLIP28.8■■■□□ 2.2
LMO1-203ENST00000524379 RRBP1Q9P2E9 1410 aaKnown RBP28.76■■■□□ 2.19
LMO1-203ENST00000524379 AFAP1Q8N556 730 aa28.74■■■□□ 2.19
LMO1-203ENST00000524379 KDM5CP41229 1560 aa28.73■■■□□ 2.19
LMO1-203ENST00000524379 ARHGEF5Q12774 1597 aa28.72■■■□□ 2.19
LMO1-203ENST00000524379 ZNF518AQ6AHZ1 1483 aa28.71■■■□□ 2.19
LMO1-203ENST00000524379 ZMYM4Q5VZL5 1548 aa28.7■■■□□ 2.19
LMO1-203ENST00000524379 CCDC141Q6ZP82 1450 aa28.68■■■□□ 2.18
LMO1-203ENST00000524379 ABCC5O15440 1437 aa28.67■■■□□ 2.18
LMO1-203ENST00000524379 FAM50AQ14320 339 aaKnown RBP28.66■■■□□ 2.18
LMO1-203ENST00000524379 DNMT1P26358 1616 aaKnown RBP28.65■■■□□ 2.18
LMO1-203ENST00000524379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.63■■■□□ 2.17
LMO1-203ENST00000524379 DAPK1P53355 1430 aa28.63■■■□□ 2.17
LMO1-203ENST00000524379 INO80Q9ULG1 1556 aaPredicted RBP28.62■■■□□ 2.17
LMO1-203ENST00000524379 YEATS2Q9ULM3 1422 aa28.61■■■□□ 2.17
LMO1-203ENST00000524379 MLH3Q9UHC1 1453 aa28.61■■■□□ 2.17
LMO1-203ENST00000524379 ZFYVE16Q7Z3T8 1539 aa28.61■■■□□ 2.17
LMO1-203ENST00000524379 HECW2Q9P2P5 1572 aa28.61■■■□□ 2.17
LMO1-203ENST00000524379 CROCC2H7BZ55 1655 aa28.61■■■□□ 2.17
LMO1-203ENST00000524379 PTPRKQ15262 1439 aa28.6■■■□□ 2.17
LMO1-203ENST00000524379 KIDINS220Q9ULH0 1771 aa28.6■■■□□ 2.17
LMO1-203ENST00000524379 MAST1Q9Y2H9 1570 aa28.58■■■□□ 2.17
LMO1-203ENST00000524379 RSPH4AQ5TD94 716 aa28.57■■■□□ 2.16
LMO1-203ENST00000524379 SPAG9O60271 1321 aaKnown RBP28.57■■■□□ 2.16
LMO1-203ENST00000524379 MAGI2Q86UL8 1455 aa28.57■■■□□ 2.16
LMO1-203ENST00000524379 ARHGEF40Q8TER5 1519 aa28.57■■■□□ 2.16
LMO1-203ENST00000524379 ATP7AQ04656 1500 aa28.56■■■□□ 2.16
LMO1-203ENST00000524379 ABCA6Q8N139 1617 aa28.56■■■□□ 2.16
LMO1-203ENST00000524379 SHANK2Q9UPX8 1470 aa28.55■■■□□ 2.16
LMO1-203ENST00000524379 C9orf84Q5VXU9 1444 aa28.54■■■□□ 2.16
LMO1-203ENST00000524379 DIP2CQ9Y2E4 1556 aa28.54■■■□□ 2.16
LMO1-203ENST00000524379 RTEL1-TNFRSF6BF6WH68 1400 aa28.52■■■□□ 2.16
LMO1-203ENST00000524379 TSPY4P0CV99 314 aa28.48■■■□□ 2.15
LMO1-203ENST00000524379 TSPY10P0CW01 314 aa28.48■■■□□ 2.15
LMO1-203ENST00000524379 SIGLEC1Q9BZZ2 1709 aa28.48■■■□□ 2.15
LMO1-203ENST00000524379 ITGAEP38570 1179 aa28.47■■■□□ 2.15
LMO1-203ENST00000524379 CHIC2Q9UKJ5 165 aa28.46■■■□□ 2.15
LMO1-203ENST00000524379 ADGRL2O95490 1459 aa28.46■■■□□ 2.15
LMO1-203ENST00000524379 PLXNC1O60486 1568 aa28.45■■■□□ 2.14
LMO1-203ENST00000524379 ADGBQ8N7X0 1667 aa28.45■■■□□ 2.14
LMO1-203ENST00000524379 ATP10AO60312 1499 aa28.44■■■□□ 2.14
LMO1-203ENST00000524379 MYT1LQ9UL68 1186 aa28.43■■■□□ 2.14
LMO1-203ENST00000524379 ARID4BQ4LE39 1312 aaPredicted RBP28.43■■■□□ 2.14
LMO1-203ENST00000524379 NCOA1Q15788 1441 aa28.41■■■□□ 2.14
LMO1-203ENST00000524379 REREQ9P2R6 1566 aa28.4■■■□□ 2.14
LMO1-203ENST00000524379 A2MP01023 1474 aa28.37■■■□□ 2.13
LMO1-203ENST00000524379 ROCK1Q13464 1354 aa28.37■■■□□ 2.13
LMO1-203ENST00000524379 ANKRD30AQ9BXX3 1397 aa28.36■■■□□ 2.13
LMO1-203ENST00000524379 KIF15Q9NS87 1388 aa28.36■■■□□ 2.13
LMO1-203ENST00000524379 RRP7BPQ9NSQ0 103 aa28.35■■■□□ 2.13
LMO1-203ENST00000524379 DHX29Q7Z478 1369 aaKnown RBP28.33■■■□□ 2.13
LMO1-203ENST00000524379 ADAMTSL3P82987 1691 aa28.32■■■□□ 2.12
LMO1-203ENST00000524379 PTPRMP28827 1452 aa28.32■■■□□ 2.12
LMO1-203ENST00000524379 DUOX2Q9NRD8 1548 aa28.31■■■□□ 2.12
LMO1-203ENST00000524379 AGLP35573 1532 aa28.3■■■□□ 2.12
LMO1-203ENST00000524379 BCORL1Q5H9F3 1711 aa28.26■■■□□ 2.12
LMO1-203ENST00000524379 ILDR1Q86SU0 546 aaPredicted RBP28.26■■■□□ 2.11
LMO1-203ENST00000524379 NAIPQ13075 1403 aa28.26■■■□□ 2.11
LMO1-203ENST00000524379 ERBINQ96RT1 1412 aa28.23■■■□□ 2.11
LMO1-203ENST00000524379 HFM1A2PYH4 1435 aa28.22■■■□□ 2.11
LMO1-203ENST00000524379 ANKRD50Q9ULJ7 1429 aa28.21■■■□□ 2.11
LMO1-203ENST00000524379 GCC2Q8IWJ2 1684 aa28.21■■■□□ 2.11
LMO1-203ENST00000524379 EIF2AK4Q9P2K8 1649 aaKnown RBP28.21■■■□□ 2.11
LMO1-203ENST00000524379 TRIM26Q12899 539 aaPredicted RBP28.2■■■□□ 2.1
LMO1-203ENST00000524379 MADDQ8WXG6 1647 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms