RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 GOLGA2Q08379 1002 aa15.87■□□□□ 0.13
PFDN1-207ENST00000524074 PPP1R15BQ5SWA1 713 aa15.82■□□□□ 0.12
PFDN1-207ENST00000524074 RANGAP1P46060 587 aaPredicted RBP15.8■□□□□ 0.12
PFDN1-207ENST00000524074 SPDYE16A6NNV3 312 aaPredicted RBP15.77■□□□□ 0.12
PFDN1-207ENST00000524074 DPYSL4O14531 572 aa15.76■□□□□ 0.11
PFDN1-207ENST00000524074 ARID3AQ99856 593 aa15.75■□□□□ 0.11
PFDN1-207ENST00000524074 ZNF316A6NFI3 1004 aaPredicted RBP15.74■□□□□ 0.11
PFDN1-207ENST00000524074 MKRN3Q13064 507 aaKnown RBP15.74■□□□□ 0.11
PFDN1-207ENST00000524074 GPHNQ9NQX3 736 aaPredicted RBP15.73■□□□□ 0.11
PFDN1-207ENST00000524074 PDIA6Q15084 440 aa15.72■□□□□ 0.11
PFDN1-207ENST00000524074 FAM117AQ9C073 453 aa15.72■□□□□ 0.11
PFDN1-207ENST00000524074 TMEM106CQ9BVX2 250 aa15.71■□□□□ 0.11
PFDN1-207ENST00000524074 TRIM26Q12899 539 aaPredicted RBP15.7■□□□□ 0.1
PFDN1-207ENST00000524074 DDRGK1Q96HY6 314 aa15.7■□□□□ 0.1
PFDN1-207ENST00000524074 EMILIN3Q9NT22 766 aa15.67■□□□□ 0.1
PFDN1-207ENST00000524074 MINK1Q8N4C8 1332 aaPredicted RBP15.67■□□□□ 0.1
PFDN1-207ENST00000524074 GPR37O15354 613 aa15.66■□□□□ 0.1
PFDN1-207ENST00000524074 FXR2P51116 673 aaKnown RBP eCLIP15.66■□□□□ 0.1
PFDN1-207ENST00000524074 FLIIQ13045 1269 aa15.65■□□□□ 0.1
PFDN1-207ENST00000524074 ZRANB1Q9UGI0 708 aa15.65■□□□□ 0.1
PFDN1-207ENST00000524074 C1orf115Q9H7X2 142 aa15.63■□□□□ 0.09
PFDN1-207ENST00000524074 MAP2K5Q13163 448 aa15.62■□□□□ 0.09
PFDN1-207ENST00000524074 PLEKHG3A1L390 1219 aa15.61■□□□□ 0.09
PFDN1-207ENST00000524074 CCDC102AQ96A19 550 aa15.61■□□□□ 0.09
PFDN1-207ENST00000524074 PHF12Q96QT6 1004 aa15.6■□□□□ 0.09
PFDN1-207ENST00000524074 NUTM2FA1L443 756 aa15.59■□□□□ 0.09
PFDN1-207ENST00000524074 DSG2Q14126 1118 aa15.59■□□□□ 0.09
PFDN1-207ENST00000524074 ARID3CA6NKF2 412 aa15.58■□□□□ 0.08
PFDN1-207ENST00000524074 APBB1O00213 710 aa15.58■□□□□ 0.08
PFDN1-207ENST00000524074 AMHR2Q16671 573 aa15.58■□□□□ 0.08
PFDN1-207ENST00000524074 IRF6O14896 467 aa15.56■□□□□ 0.08
PFDN1-207ENST00000524074 PARP9Q8IXQ6 854 aa15.56■□□□□ 0.08
PFDN1-207ENST00000524074 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.55■□□□□ 0.08
PFDN1-207ENST00000524074 GRXCR2A6NFK2 248 aa15.54■□□□□ 0.08
PFDN1-207ENST00000524074 TMC2Q8TDI7 906 aa15.54■□□□□ 0.08
PFDN1-207ENST00000524074 HRCP23327 699 aa15.53■□□□□ 0.08
PFDN1-207ENST00000524074 CD44P16070 742 aaKnown RBP15.52■□□□□ 0.08
PFDN1-207ENST00000524074 GNPATO15228 680 aa15.51■□□□□ 0.07
PFDN1-207ENST00000524074 FOXK1P85037 733 aa15.51■□□□□ 0.07
PFDN1-207ENST00000524074 ILDR1Q86SU0 546 aaPredicted RBP15.49■□□□□ 0.07
PFDN1-207ENST00000524074 GOPCQ9HD26 462 aa15.49■□□□□ 0.07
PFDN1-207ENST00000524074 TRPC6Q9Y210 931 aa15.49■□□□□ 0.07
PFDN1-207ENST00000524074 TTLL12Q14166 644 aaPredicted RBP15.48■□□□□ 0.07
PFDN1-207ENST00000524074 HIC1Q14526 733 aa15.46■□□□□ 0.07
PFDN1-207ENST00000524074 FCHSD2O94868 740 aa15.45■□□□□ 0.06
PFDN1-207ENST00000524074 MAP3K9P80192 1104 aa15.45■□□□□ 0.06
PFDN1-207ENST00000524074 MS4A3Q96HJ5 214 aa15.45■□□□□ 0.06
PFDN1-207ENST00000524074 PLPP6Q8IY26 295 aa15.44■□□□□ 0.06
PFDN1-207ENST00000524074 PDIA4P13667 645 aaKnown RBP15.43■□□□□ 0.06
PFDN1-207ENST00000524074 NPM2Q86SE8 214 aaKnown RBP15.43■□□□□ 0.06
PFDN1-207ENST00000524074 MICALL2Q8IY33 904 aa15.43■□□□□ 0.06
PFDN1-207ENST00000524074 PCMTD1Q96MG8 357 aaPredicted RBP15.43■□□□□ 0.06
PFDN1-207ENST00000524074 ONECUT3O60422 494 aaPredicted RBP15.42■□□□□ 0.06
PFDN1-207ENST00000524074 A6NJR5 290 aa15.41■□□□□ 0.06
PFDN1-207ENST00000524074 TIE1P35590 1138 aa15.41■□□□□ 0.06
PFDN1-207ENST00000524074 PIP4P2Q8N4L2 257 aa15.41■□□□□ 0.06
PFDN1-207ENST00000524074 OSBPP22059 807 aa15.39■□□□□ 0.05
PFDN1-207ENST00000524074 ZBTB7CA1YPR0 619 aa15.38■□□□□ 0.05
PFDN1-207ENST00000524074 TTLL13PA6NNM8 815 aa15.38■□□□□ 0.05
PFDN1-207ENST00000524074 TRAK2O60296 914 aa15.37■□□□□ 0.05
PFDN1-207ENST00000524074 FECHP22830 423 aa15.37■□□□□ 0.05
PFDN1-207ENST00000524074 DPY19L2Q6NUT2 758 aa15.36■□□□□ 0.05
PFDN1-207ENST00000524074 CCDC82Q8N4S0 544 aa15.36■□□□□ 0.05
PFDN1-207ENST00000524074 CLUAP1Q96AJ1 413 aa15.36■□□□□ 0.05
PFDN1-207ENST00000524074 GIGYF2Q6Y7W6 1299 aaKnown RBP15.35■□□□□ 0.05
PFDN1-207ENST00000524074 CHRDL2Q6WN34 429 aa15.32■□□□□ 0.04
PFDN1-207ENST00000524074 C2orf72A6NCS6 295 aa15.31■□□□□ 0.04
PFDN1-207ENST00000524074 MS4A1P11836 297 aa15.31■□□□□ 0.04
PFDN1-207ENST00000524074 DDX12PQ92771 950 aa15.31■□□□□ 0.04
PFDN1-207ENST00000524074 UPF1Q92900 1129 aaKnown RBP eCLIP15.31■□□□□ 0.048e-8■■■■■ 39
PFDN1-207ENST00000524074 PTGER2P43116 358 aa15.3■□□□□ 0.04
PFDN1-207ENST00000524074 TRIM35Q9UPQ4 493 aa15.3■□□□□ 0.04
PFDN1-207ENST00000524074 MCM6Q14566 821 aa15.28■□□□□ 0.04
PFDN1-207ENST00000524074 CCDC9Q9Y3X0 531 aaKnown RBP15.28■□□□□ 0.04
PFDN1-207ENST00000524074 SH3D19Q5HYK7 790 aa15.27■□□□□ 0.04
PFDN1-207ENST00000524074 BMP2KQ9NSY1 1161 aaPredicted RBP15.27■□□□□ 0.04
PFDN1-207ENST00000524074 G3V3G9 751 aa15.26■□□□□ 0.03
PFDN1-207ENST00000524074 KIF3CO14782 793 aa15.26■□□□□ 0.03
PFDN1-207ENST00000524074 PTGDRQ13258 359 aa15.26■□□□□ 0.03
PFDN1-207ENST00000524074 TBC1D12O60347 775 aa15.23■□□□□ 0.03
PFDN1-207ENST00000524074 PDCD7Q8N8D1 485 aaKnown RBP15.22■□□□□ 0.03
PFDN1-207ENST00000524074 BOLA1Q9Y3E2 137 aa15.22■□□□□ 0.03
PFDN1-207ENST00000524074 PROSER2Q86WR7 435 aaPredicted RBP15.21■□□□□ 0.03
PFDN1-207ENST00000524074 OXER1Q8TDS5 423 aa15.21■□□□□ 0.03
PFDN1-207ENST00000524074 TMEM121BQ9BXQ6 578 aaPredicted RBP15.21■□□□□ 0.03
PFDN1-207ENST00000524074 CLCN1P35523 988 aa15.2■□□□□ 0.02
PFDN1-207ENST00000524074 REPIN1Q9BWE0 567 aaKnown RBP15.2■□□□□ 0.02
PFDN1-207ENST00000524074 RAD21O60216 631 aa15.18■□□□□ 0.02
PFDN1-207ENST00000524074 ATP1B4Q9UN42 357 aaPredicted RBP15.18■□□□□ 0.02
PFDN1-207ENST00000524074 PRIM1P49642 420 aaKnown RBP15.17■□□□□ 0.02
PFDN1-207ENST00000524074 ZNF777Q9ULD5 760 aaPredicted RBP15.17■□□□□ 0.02
PFDN1-207ENST00000524074 SKIV2LQ15477 1246 aaKnown RBP15.16■□□□□ 0.02
PFDN1-207ENST00000524074 CCDC97Q96F63 343 aaPredicted RBP15.16■□□□□ 0.02
PFDN1-207ENST00000524074 EVI5O60447 810 aa15.15■□□□□ 0.02
PFDN1-207ENST00000524074 NECTIN2Q92692 538 aa15.15■□□□□ 0.02
PFDN1-207ENST00000524074 GPCPD1Q9NPB8 672 aa15.15■□□□□ 0.02
PFDN1-207ENST00000524074 SERPINA10Q9UK55 444 aa15.14■□□□□ 0.01
PFDN1-207ENST00000524074 MDM2Q00987 491 aaPredicted RBP15.12■□□□□ 0.01
PFDN1-207ENST00000524074 TMUB1Q9BVT8 246 aa15.12■□□□□ 0.01
PFDN1-207ENST00000524074 SSTR3P32745 418 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms