RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 HS3ST6Q96QI5 342 aa9.38□□□□□ -0.91
LINCR-0001-203ENST00000524047 FAM205CA6NFA0 338 aa9.37□□□□□ -0.91
LINCR-0001-203ENST00000524047 ZSWIM6Q9HCJ5 1215 aa9.37□□□□□ -0.91
LINCR-0001-203ENST00000524047 POTEB3A0JP26 581 aa9.36□□□□□ -0.91
LINCR-0001-203ENST00000524047 POTEBQ6S5H4 581 aa9.36□□□□□ -0.91
LINCR-0001-203ENST00000524047 HS6ST3Q8IZP7 471 aa9.34□□□□□ -0.91
LINCR-0001-203ENST00000524047 KIF3CO14782 793 aa9.32□□□□□ -0.92
LINCR-0001-203ENST00000524047 GPR153Q6NV75 609 aa9.31□□□□□ -0.92
LINCR-0001-203ENST00000524047 SPNS2Q8IVW8 549 aa9.3□□□□□ -0.92
LINCR-0001-203ENST00000524047 KRTAP3-3Q9BYR6 98 aa9.3□□□□□ -0.92
LINCR-0001-203ENST00000524047 KRTAP3-2Q9BYR7 98 aa9.3□□□□□ -0.92
LINCR-0001-203ENST00000524047 ERBB3P21860 1342 aa9.3□□□□□ -0.92
LINCR-0001-203ENST00000524047 C2orf72A6NCS6 295 aa9.28□□□□□ -0.92
LINCR-0001-203ENST00000524047 PPP1R37O75864 691 aa9.28□□□□□ -0.92
LINCR-0001-203ENST00000524047 DNAJC5Q9H3Z4 198 aa9.28□□□□□ -0.92
LINCR-0001-203ENST00000524047 CHGAP10645 457 aaKnown RBP9.26□□□□□ -0.93
LINCR-0001-203ENST00000524047 MMRN1Q13201 1228 aa9.25□□□□□ -0.93
LINCR-0001-203ENST00000524047 ARSIQ5FYB1 569 aa9.24□□□□□ -0.93
LINCR-0001-203ENST00000524047 VARS2Q5ST30 1063 aaKnown RBP9.24□□□□□ -0.93
LINCR-0001-203ENST00000524047 TMC2Q8TDI7 906 aa9.24□□□□□ -0.93
LINCR-0001-203ENST00000524047 SLC34A2O95436 690 aa9.23□□□□□ -0.93
LINCR-0001-203ENST00000524047 ZNF687Q8N1G0 1237 aa9.21□□□□□ -0.94
LINCR-0001-203ENST00000524047 NKX1-1Q15270 411 aaPredicted RBP9.2□□□□□ -0.94
LINCR-0001-203ENST00000524047 KHSRPQ92945 711 aaKnown RBP eCLIP9.19□□□□□ -0.94
LINCR-0001-203ENST00000524047 RYDENQ9NUL5 291 aaKnown RBP9.19□□□□□ -0.94
LINCR-0001-203ENST00000524047 ZNF316A6NFI3 1004 aaPredicted RBP9.18□□□□□ -0.94
LINCR-0001-203ENST00000524047 FOXK1P85037 733 aa9.16□□□□□ -0.94
LINCR-0001-203ENST00000524047 PCDHGA4Q9Y5G9 962 aa9.16□□□□□ -0.94
LINCR-0001-203ENST00000524047 GPHNQ9NQX3 736 aaPredicted RBP9.15□□□□□ -0.94
LINCR-0001-203ENST00000524047 NUDT7P0C024 238 aa9.14□□□□□ -0.95
LINCR-0001-203ENST00000524047 PTCD2Q8WV60 388 aaKnown RBP9.12□□□□□ -0.95
LINCR-0001-203ENST00000524047 PLPP6Q8IY26 295 aa9.11□□□□□ -0.95
LINCR-0001-203ENST00000524047 DSG2Q14126 1118 aa9.1□□□□□ -0.95
LINCR-0001-203ENST00000524047 LHX6Q9UPM6 363 aa9.1□□□□□ -0.95
LINCR-0001-203ENST00000524047 KDM4FA0A1W2PPD8 638 aa9.09□□□□□ -0.95
LINCR-0001-203ENST00000524047 GTPBP6O43824 516 aaPredicted RBP9.08□□□□□ -0.96
LINCR-0001-203ENST00000524047 PBX2P40425 430 aa9.07□□□□□ -0.96
LINCR-0001-203ENST00000524047 CRISPLD2Q9H0B8 497 aa9.07□□□□□ -0.96
LINCR-0001-203ENST00000524047 PSDA5PKW4 1024 aaPredicted RBP9.06□□□□□ -0.96
LINCR-0001-203ENST00000524047 TBC1D12O60347 775 aa9.05□□□□□ -0.96
LINCR-0001-203ENST00000524047 PTGER2P43116 358 aa9.05□□□□□ -0.96
LINCR-0001-203ENST00000524047 LSM11P83369 360 aaKnown RBP eCLIP9.04□□□□□ -0.96
LINCR-0001-203ENST00000524047 DCAF8L2P0C7V8 631 aa9.03□□□□□ -0.96
LINCR-0001-203ENST00000524047 RNF166Q96A37 237 aaPredicted RBP9.03□□□□□ -0.96
LINCR-0001-203ENST00000524047 MYT1LQ9UL68 1186 aa9.03□□□□□ -0.96
LINCR-0001-203ENST00000524047 PDE4AP27815 886 aa9.02□□□□□ -0.97
LINCR-0001-203ENST00000524047 AMER1Q5JTC6 1135 aaPredicted RBP9.02□□□□□ -0.97
LINCR-0001-203ENST00000524047 POTEEQ6S8J3 1075 aa9.02□□□□□ -0.97
LINCR-0001-203ENST00000524047 ANKRD13DQ6ZTN6 518 aa9.02□□□□□ -0.97
LINCR-0001-203ENST00000524047 NCKAP5LQ9HCH0 1330 aa9.02□□□□□ -0.97
LINCR-0001-203ENST00000524047 PPP1R15BQ5SWA1 713 aa9.01□□□□□ -0.97
LINCR-0001-203ENST00000524047 RTN4Q9NQC3 1192 aaKnown RBP9.01□□□□□ -0.97
LINCR-0001-203ENST00000524047 OXER1Q8TDS5 423 aa9□□□□□ -0.97
LINCR-0001-203ENST00000524047 ARHGAP33O14559 1287 aa8.98□□□□□ -0.97
LINCR-0001-203ENST00000524047 AXIN2Q9Y2T1 843 aa8.98□□□□□ -0.97
LINCR-0001-203ENST00000524047 PPP4R3BQ5MIZ7 849 aa8.96□□□□□ -0.98
LINCR-0001-203ENST00000524047 UPF1Q92900 1129 aaKnown RBP eCLIP8.95□□□□□ -0.98
LINCR-0001-203ENST00000524047 LARP6Q9BRS8 491 aaKnown RBP8.95□□□□□ -0.98
LINCR-0001-203ENST00000524047 MFSD10Q14728 455 aa8.94□□□□□ -0.98
LINCR-0001-203ENST00000524047 DDX27Q96GQ7 796 aaKnown RBP8.94□□□□□ -0.98
LINCR-0001-203ENST00000524047 TK2O00142 265 aa8.92□□□□□ -0.98
LINCR-0001-203ENST00000524047 ADGRD1Q6QNK2 874 aa8.91□□□□□ -0.98
LINCR-0001-203ENST00000524047 ANO8Q9HCE9 1232 aaPredicted RBP8.91□□□□□ -0.98
LINCR-0001-203ENST00000524047 PSEN2P49810 448 aa8.9□□□□□ -0.98
LINCR-0001-203ENST00000524047 DMRTA1Q5VZB9 504 aa8.89□□□□□ -0.99
LINCR-0001-203ENST00000524047 BBXQ8WY36 941 aaPredicted RBP8.89□□□□□ -0.99
LINCR-0001-203ENST00000524047 CADPS2Q86UW7 1296 aa8.88□□□□□ -0.99
LINCR-0001-203ENST00000524047 HRO43593 1189 aa8.87□□□□□ -0.99
LINCR-0001-203ENST00000524047 EVI5O60447 810 aa8.87□□□□□ -0.99
LINCR-0001-203ENST00000524047 FOSBP53539 338 aa8.87□□□□□ -0.99
LINCR-0001-203ENST00000524047 ZNF454Q8N9F8 522 aa8.87□□□□□ -0.99
LINCR-0001-203ENST00000524047 KCNH8Q96L42 1107 aa8.87□□□□□ -0.99
LINCR-0001-203ENST00000524047 BCL2L12Q9HB09 334 aa8.86□□□□□ -0.99
LINCR-0001-203ENST00000524047 MAP3K9P80192 1104 aa8.85□□□□□ -0.99
LINCR-0001-203ENST00000524047 JPH4Q96JJ6 628 aa8.85□□□□□ -0.99
LINCR-0001-203ENST00000524047 KCNK17Q96T54 332 aa8.85□□□□□ -0.99
LINCR-0001-203ENST00000524047 EMILIN3Q9NT22 766 aa8.85□□□□□ -0.99
LINCR-0001-203ENST00000524047 SLC4A5Q9BY07 1137 aa8.83□□□□□ -1
LINCR-0001-203ENST00000524047 CAMK2BQ13554 666 aa8.81□□□□□ -1
LINCR-0001-203ENST00000524047 ZDHHC16Q969W1 377 aa8.81□□□□□ -1
LINCR-0001-203ENST00000524047 VPS9D1Q9Y2B5 631 aa8.81□□□□□ -1
LINCR-0001-203ENST00000524047 PTPREP23469 700 aa8.8□□□□□ -1
LINCR-0001-203ENST00000524047 HCSTQ9UBK5 93 aa8.8□□□□□ -1
LINCR-0001-203ENST00000524047 SPRYD3Q8NCJ5 442 aa8.79□□□□□ -1
LINCR-0001-203ENST00000524047 STAC3Q96MF2 364 aa8.78□□□□□ -1
LINCR-0001-203ENST00000524047 ADAM33Q9BZ11 813 aa8.78□□□□□ -1
LINCR-0001-203ENST00000524047 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.78□□□□□ -1
LINCR-0001-203ENST00000524047 ZBED2Q9BTP6 218 aa8.76□□□□□ -1.01
LINCR-0001-203ENST00000524047 PCDHGA10Q9Y5H3 936 aa8.76□□□□□ -1.01
LINCR-0001-203ENST00000524047 BHMG1C9JSJ3 638 aaPredicted RBP8.75□□□□□ -1.01
LINCR-0001-203ENST00000524047 PHF14O94880 888 aa8.74□□□□□ -1.01
LINCR-0001-203ENST00000524047 FBXW7Q969H0 707 aa8.74□□□□□ -1.01
LINCR-0001-203ENST00000524047 TYW1BQ6NUM6 668 aa8.73□□□□□ -1.01
LINCR-0001-203ENST00000524047 KCTD12Q96CX2 325 aaKnown RBP8.73□□□□□ -1.01
LINCR-0001-203ENST00000524047 DPYSL4O14531 572 aa8.72□□□□□ -1.01
LINCR-0001-203ENST00000524047 PPP1R3GB7ZBB8 358 aa8.71□□□□□ -1.02
LINCR-0001-203ENST00000524047 EPAS1Q99814 870 aa8.7□□□□□ -1.02
LINCR-0001-203ENST00000524047 PAXIP1Q6ZW49 1069 aaPredicted RBP8.69□□□□□ -1.02
LINCR-0001-203ENST00000524047 PLA2G2EQ9NZK7 142 aa8.69□□□□□ -1.02
LINCR-0001-203ENST00000524047 MRPL50Q8N5N7 158 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms