RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 ARHGAP5Q13017 1502 aa30.76■■■□□ 2.51
FBXO28-205ENST00000523990 ZMYM4Q5VZL5 1548 aa30.76■■■□□ 2.51
FBXO28-205ENST00000523990 ARHGEF40Q8TER5 1519 aa30.75■■■□□ 2.51
FBXO28-205ENST00000523990 POGZQ7Z3K3 1410 aa30.7■■■□□ 2.51
FBXO28-205ENST00000523990 SCAPERQ9BY12 1400 aa30.69■■■□□ 2.5
FBXO28-205ENST00000523990 EFCAB2Q5VUJ9 269 aa30.68■■■□□ 2.5
FBXO28-205ENST00000523990 EHBP1L1Q8N3D4 1523 aa30.65■■■□□ 2.5
FBXO28-205ENST00000523990 ZFYVE16Q7Z3T8 1539 aa30.63■■■□□ 2.49
FBXO28-205ENST00000523990 ABCC1P33527 1531 aa30.63■■■□□ 2.49
FBXO28-205ENST00000523990 VPS8Q8N3P4 1428 aa30.62■■■□□ 2.49
FBXO28-205ENST00000523990 ITSN2Q9NZM3 1697 aa30.62■■■□□ 2.49
FBXO28-205ENST00000523990 MAGI2Q86UL8 1455 aa30.62■■■□□ 2.49
FBXO28-205ENST00000523990 MTUS2Q5JR59 1369 aa30.61■■■□□ 2.49
FBXO28-205ENST00000523990 KDM5CP41229 1560 aa30.6■■■□□ 2.49
FBXO28-205ENST00000523990 ZNF518AQ6AHZ1 1483 aa30.59■■■□□ 2.49
FBXO28-205ENST00000523990 TIAM1Q13009 1591 aa30.58■■■□□ 2.49
FBXO28-205ENST00000523990 BCORL1Q5H9F3 1711 aa30.58■■■□□ 2.49
FBXO28-205ENST00000523990 SIGLEC1Q9BZZ2 1709 aa30.57■■■□□ 2.48
FBXO28-205ENST00000523990 GPATCH8Q9UKJ3 1502 aaKnown RBP30.57■■■□□ 2.48
FBXO28-205ENST00000523990 YEATS2Q9ULM3 1422 aa30.57■■■□□ 2.48
FBXO28-205ENST00000523990 ADAMTSL3P82987 1691 aa30.56■■■□□ 2.48
FBXO28-205ENST00000523990 SAMD9LQ8IVG5 1584 aa30.56■■■□□ 2.48
FBXO28-205ENST00000523990 HECW2Q9P2P5 1572 aa30.54■■■□□ 2.48
FBXO28-205ENST00000523990 ARHGEF12Q9NZN5 1544 aa30.53■■■□□ 2.48
FBXO28-205ENST00000523990 SUPT6HQ7KZ85 1726 aaKnown RBP30.51■■■□□ 2.47
FBXO28-205ENST00000523990 CCNB3Q8WWL7 1395 aa30.47■■■□□ 2.47
FBXO28-205ENST00000523990 SYCP2Q9BX26 1530 aa30.46■■■□□ 2.47
FBXO28-205ENST00000523990 MADDQ8WXG6 1647 aa30.46■■■□□ 2.47
FBXO28-205ENST00000523990 TRAPPC8Q9Y2L5 1435 aa30.45■■■□□ 2.47
FBXO28-205ENST00000523990 ABCA6Q8N139 1617 aa30.44■■■□□ 2.46
FBXO28-205ENST00000523990 AFAP1Q8N556 730 aa30.44■■■□□ 2.46
FBXO28-205ENST00000523990 DIP2CQ9Y2E4 1556 aa30.44■■■□□ 2.46
FBXO28-205ENST00000523990 MAP3K1Q13233 1512 aa30.42■■■□□ 2.46
FBXO28-205ENST00000523990 ATP10AO60312 1499 aa30.42■■■□□ 2.46
FBXO28-205ENST00000523990 MLH3Q9UHC1 1453 aa30.42■■■□□ 2.46
FBXO28-205ENST00000523990 C9orf84Q5VXU9 1444 aa30.41■■■□□ 2.46
FBXO28-205ENST00000523990 KIDINS220Q9ULH0 1771 aa30.41■■■□□ 2.46
FBXO28-205ENST00000523990 NCOA2Q15596 1464 aa30.41■■■□□ 2.46
FBXO28-205ENST00000523990 ARID4BQ4LE39 1312 aaPredicted RBP30.41■■■□□ 2.46
FBXO28-205ENST00000523990 LRRC9Q6ZRR7 1453 aa30.4■■■□□ 2.46
FBXO28-205ENST00000523990 PLEKHH2Q8IVE3 1493 aa30.38■■■□□ 2.45
FBXO28-205ENST00000523990 REREQ9P2R6 1566 aa30.38■■■□□ 2.45
FBXO28-205ENST00000523990 CFDP1Q9UEE9 299 aaPredicted RBP30.38■■■□□ 2.45
FBXO28-205ENST00000523990 ZNF777Q9ULD5 760 aaPredicted RBP30.38■■■□□ 2.45
FBXO28-205ENST00000523990 RIMS1Q86UR5 1692 aaKnown RBP30.37■■■□□ 2.45
FBXO28-205ENST00000523990 KIAA1107Q9UPP5 1409 aa30.37■■■□□ 2.45
FBXO28-205ENST00000523990 FER1L4A9Z1Z3 1794 aa30.34■■■□□ 2.45
FBXO28-205ENST00000523990 PTPRMP28827 1452 aa30.34■■■□□ 2.45
FBXO28-205ENST00000523990 INO80Q9ULG1 1556 aaPredicted RBP30.32■■■□□ 2.44
FBXO28-205ENST00000523990 HNRNPMP52272 730 aaKnown RBP eCLIP30.27■■■□□ 2.44
FBXO28-205ENST00000523990 ATP7AQ04656 1500 aa30.27■■■□□ 2.44
FBXO28-205ENST00000523990 MYT1LQ9UL68 1186 aa30.26■■■□□ 2.43
FBXO28-205ENST00000523990 MBD5Q9P267 1494 aa30.25■■■□□ 2.43
FBXO28-205ENST00000523990 CAMSAP2Q08AD1 1489 aa30.24■■■□□ 2.43
FBXO28-205ENST00000523990 ZNF644Q9H582 1327 aaPredicted RBP30.24■■■□□ 2.43
FBXO28-205ENST00000523990 KANK4Q5T7N3 995 aaPredicted RBP30.22■■■□□ 2.43
FBXO28-205ENST00000523990 AGLP35573 1532 aa30.22■■■□□ 2.43
FBXO28-205ENST00000523990 SPAG9O60271 1321 aaKnown RBP30.19■■■□□ 2.42
FBXO28-205ENST00000523990 MLECQ14165 292 aa30.19■■■□□ 2.42
FBXO28-205ENST00000523990 PLXNC1O60486 1568 aa30.17■■■□□ 2.42
FBXO28-205ENST00000523990 ADGBQ8N7X0 1667 aa30.17■■■□□ 2.42
FBXO28-205ENST00000523990 ARHGEF5Q12774 1597 aa30.15■■■□□ 2.42
FBXO28-205ENST00000523990 CCDC141Q6ZP82 1450 aa30.14■■■□□ 2.42
FBXO28-205ENST00000523990 MYOM3Q5VTT5 1437 aa30.12■■■□□ 2.41
FBXO28-205ENST00000523990 APLP2Q06481 763 aa30.1■■■□□ 2.41
FBXO28-205ENST00000523990 RTEL1-TNFRSF6BF6WH68 1400 aa30.08■■■□□ 2.41
FBXO28-205ENST00000523990 A2MP01023 1474 aa30.08■■■□□ 2.41
FBXO28-205ENST00000523990 MIA2Q96PC5 1412 aa30.08■■■□□ 2.41
FBXO28-205ENST00000523990 C3P01024 1663 aa30.04■■■□□ 2.4
FBXO28-205ENST00000523990 RSPH4AQ5TD94 716 aa30.01■■■□□ 2.39
FBXO28-205ENST00000523990 LMTK3Q96Q04 1460 aa30.01■■■□□ 2.39
FBXO28-205ENST00000523990 MAST1Q9Y2H9 1570 aa30.01■■■□□ 2.39
FBXO28-205ENST00000523990 PTPN23Q9H3S7 1636 aa30■■■□□ 2.39
FBXO28-205ENST00000523990 MROH2AA6NES4 1674 aa29.99■■■□□ 2.39
FBXO28-205ENST00000523990 CROCC2H7BZ55 1655 aa29.97■■■□□ 2.39
FBXO28-205ENST00000523990 PREX1Q8TCU6 1659 aa29.97■■■□□ 2.39
FBXO28-205ENST00000523990 PLPPR3Q6T4P5 718 aa29.96■■■□□ 2.39
FBXO28-205ENST00000523990 CLTCQ00610 1675 aaKnown RBP29.94■■■□□ 2.38
FBXO28-205ENST00000523990 CNTLNQ9NXG0 1405 aa29.93■■■□□ 2.38
FBXO28-205ENST00000523990 FGD6Q6ZV73 1430 aa29.92■■■□□ 2.38
FBXO28-205ENST00000523990 DHX29Q7Z478 1369 aaKnown RBP29.91■■■□□ 2.38
FBXO28-205ENST00000523990 TCOF1Q13428 1488 aaKnown RBP29.89■■■□□ 2.38
FBXO28-205ENST00000523990 SETD1BQ9UPS6 1966 aaKnown RBP29.89■■■□□ 2.37
FBXO28-205ENST00000523990 DNMT1P26358 1616 aaKnown RBP29.89■■■□□ 2.37
FBXO28-205ENST00000523990 CEBPAP49715 358 aaPredicted RBP29.88■■■□□ 2.37
FBXO28-205ENST00000523990 TSPY4P0CV99 314 aa29.88■■■□□ 2.37
FBXO28-205ENST00000523990 TSPY10P0CW01 314 aa29.88■■■□□ 2.37
FBXO28-205ENST00000523990 ESF1Q9H501 851 aaKnown RBP29.87■■■□□ 2.37
FBXO28-205ENST00000523990 SHANK2Q9UPX8 1470 aa29.85■■■□□ 2.37
FBXO28-205ENST00000523990 EIF2AK4Q9P2K8 1649 aaKnown RBP29.82■■■□□ 2.36
FBXO28-205ENST00000523990 ABCC5O15440 1437 aa29.8■■■□□ 2.36
FBXO28-205ENST00000523990 RNF17Q9BXT8 1623 aaKnown RBP29.8■■■□□ 2.36
FBXO28-205ENST00000523990 FAM135AQ9P2D6 1515 aa29.8■■■□□ 2.36
FBXO28-205ENST00000523990 GGT6Q6P531 493 aa29.79■■■□□ 2.36
FBXO28-205ENST00000523990 DAPK1P53355 1430 aa29.79■■■□□ 2.36
FBXO28-205ENST00000523990 ZMYM3Q14202 1370 aa29.77■■■□□ 2.36
FBXO28-205ENST00000523990 UHRF1BP1Q6BDS2 1440 aa29.76■■■□□ 2.36
FBXO28-205ENST00000523990 KDM5DQ9BY66 1539 aa29.76■■■□□ 2.35
FBXO28-205ENST00000523990 DUOX2Q9NRD8 1548 aa29.75■■■□□ 2.35
FBXO28-205ENST00000523990 KIF3BO15066 747 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms