RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 LCE2DQ5TA82 110 aaPredicted RBP9.74□□□□□ -0.85
PCM1-220ENST00000523896 TMC2Q8TDI7 906 aa9.73□□□□□ -0.85
PCM1-220ENST00000523896 PCDH10Q9P2E7 1040 aa9.73□□□□□ -0.85
PCM1-220ENST00000523896 TMEM92Q6UXU6 159 aa9.71□□□□□ -0.86
PCM1-220ENST00000523896 EMP3P54852 163 aa9.7□□□□□ -0.86
PCM1-220ENST00000523896 PPP1R37O75864 691 aa9.69□□□□□ -0.86
PCM1-220ENST00000523896 PLCB2Q00722 1185 aa9.68□□□□□ -0.86
PCM1-220ENST00000523896 NKX1-1Q15270 411 aaPredicted RBP9.68□□□□□ -0.86
PCM1-220ENST00000523896 HOXB3P14651 431 aaPredicted RBP9.67□□□□□ -0.86
PCM1-220ENST00000523896 MARVELD3Q96A59 401 aa9.67□□□□□ -0.86
PCM1-220ENST00000523896 C2orf72A6NCS6 295 aa9.66□□□□□ -0.86
PCM1-220ENST00000523896 ZSWIM6Q9HCJ5 1215 aa9.66□□□□□ -0.86
PCM1-220ENST00000523896 BBXQ8WY36 941 aaPredicted RBP9.65□□□□□ -0.86
PCM1-220ENST00000523896 HOXB1P14653 301 aaPredicted RBP9.62□□□□□ -0.87
PCM1-220ENST00000523896 CDAN1Q8IWY9 1227 aa9.62□□□□□ -0.87
PCM1-220ENST00000523896 KIF3CO14782 793 aa9.61□□□□□ -0.87
PCM1-220ENST00000523896 FAM205CA6NFA0 338 aa9.6□□□□□ -0.87
PCM1-220ENST00000523896 GTPBP6O43824 516 aaPredicted RBP9.6□□□□□ -0.87
PCM1-220ENST00000523896 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.6□□□□□ -0.87
PCM1-220ENST00000523896 ERBB3P21860 1342 aa9.59□□□□□ -0.87
PCM1-220ENST00000523896 GPHNQ9NQX3 736 aaPredicted RBP9.57□□□□□ -0.88
PCM1-220ENST00000523896 HS3ST6Q96QI5 342 aa9.56□□□□□ -0.88
PCM1-220ENST00000523896 ARSIQ5FYB1 569 aa9.55□□□□□ -0.88
PCM1-220ENST00000523896 PDE4AP27815 886 aa9.54□□□□□ -0.88
PCM1-220ENST00000523896 FOXK1P85037 733 aa9.54□□□□□ -0.88
PCM1-220ENST00000523896 PLPP6Q8IY26 295 aa9.54□□□□□ -0.88
PCM1-220ENST00000523896 SLC34A2O95436 690 aa9.53□□□□□ -0.88
PCM1-220ENST00000523896 GPR153Q6NV75 609 aa9.53□□□□□ -0.88
PCM1-220ENST00000523896 TBC1D12O60347 775 aa9.51□□□□□ -0.89
PCM1-220ENST00000523896 DSG2Q14126 1118 aa9.51□□□□□ -0.89
PCM1-220ENST00000523896 PAXIP1Q6ZW49 1069 aaPredicted RBP9.51□□□□□ -0.89
PCM1-220ENST00000523896 VARS2Q5ST30 1063 aaKnown RBP9.5□□□□□ -0.89
PCM1-220ENST00000523896 SPRYD3Q8NCJ5 442 aa9.5□□□□□ -0.89
PCM1-220ENST00000523896 PCDHGA4Q9Y5G9 962 aa9.5□□□□□ -0.89
PCM1-220ENST00000523896 HAP1P54257 671 aaPredicted RBP9.49□□□□□ -0.89
PCM1-220ENST00000523896 CRISPLD2Q9H0B8 497 aa9.49□□□□□ -0.89
PCM1-220ENST00000523896 NUDT7P0C024 238 aa9.48□□□□□ -0.89
PCM1-220ENST00000523896 PPP1R15BQ5SWA1 713 aa9.48□□□□□ -0.89
PCM1-220ENST00000523896 CFAP44Q96MT7 982 aa9.48□□□□□ -0.89
PCM1-220ENST00000523896 ZNF316A6NFI3 1004 aaPredicted RBP9.47□□□□□ -0.89
PCM1-220ENST00000523896 KHSRPQ92945 711 aaKnown RBP eCLIP9.47□□□□□ -0.89
PCM1-220ENST00000523896 LARP6Q9BRS8 491 aaKnown RBP9.47□□□□□ -0.89
PCM1-220ENST00000523896 DDX27Q96GQ7 796 aaKnown RBP9.46□□□□□ -0.9
PCM1-220ENST00000523896 PTCD2Q8WV60 388 aaKnown RBP9.44□□□□□ -0.9
PCM1-220ENST00000523896 NCKAP5LQ9HCH0 1330 aa9.43□□□□□ -0.9
PCM1-220ENST00000523896 POTEB3A0JP26 581 aa9.43□□□□□ -0.9
PCM1-220ENST00000523896 PSDA5PKW4 1024 aaPredicted RBP9.43□□□□□ -0.9
PCM1-220ENST00000523896 POTEBQ6S5H4 581 aa9.43□□□□□ -0.9
PCM1-220ENST00000523896 UPF1Q92900 1129 aaKnown RBP eCLIP9.43□□□□□ -0.9
PCM1-220ENST00000523896 ZNF687Q8N1G0 1237 aa9.42□□□□□ -0.9
PCM1-220ENST00000523896 LHX6Q9UPM6 363 aa9.41□□□□□ -0.9
PCM1-220ENST00000523896 VSIG10Q8N0Z9 540 aa9.39□□□□□ -0.91
PCM1-220ENST00000523896 MFSD10Q14728 455 aa9.38□□□□□ -0.91
PCM1-220ENST00000523896 OXER1Q8TDS5 423 aa9.37□□□□□ -0.91
PCM1-220ENST00000523896 KRTAP3-3Q9BYR6 98 aa9.37□□□□□ -0.91
PCM1-220ENST00000523896 KRTAP3-2Q9BYR7 98 aa9.37□□□□□ -0.91
PCM1-220ENST00000523896 PBX2P40425 430 aa9.36□□□□□ -0.91
PCM1-220ENST00000523896 MAP3K9P80192 1104 aa9.36□□□□□ -0.91
PCM1-220ENST00000523896 PPP4R3BQ5MIZ7 849 aa9.36□□□□□ -0.91
PCM1-220ENST00000523896 CADPS2Q86UW7 1296 aa9.36□□□□□ -0.91
PCM1-220ENST00000523896 SPNS2Q8IVW8 549 aa9.35□□□□□ -0.91
PCM1-220ENST00000523896 KCNH8Q96L42 1107 aa9.35□□□□□ -0.91
PCM1-220ENST00000523896 TSHZ2Q9NRE2 1034 aa9.34□□□□□ -0.91
PCM1-220ENST00000523896 WDR70Q9NW82 654 aa9.33□□□□□ -0.92
PCM1-220ENST00000523896 ANKRD13DQ6ZTN6 518 aa9.31□□□□□ -0.92
PCM1-220ENST00000523896 EVI5O60447 810 aa9.29□□□□□ -0.92
PCM1-220ENST00000523896 MMRN1Q13201 1228 aa9.29□□□□□ -0.92
PCM1-220ENST00000523896 ZNF454Q8N9F8 522 aa9.29□□□□□ -0.92
PCM1-220ENST00000523896 KDM2AQ9Y2K7 1162 aa9.29□□□□□ -0.92
PCM1-220ENST00000523896 KDM4FA0A1W2PPD8 638 aa9.28□□□□□ -0.92
PCM1-220ENST00000523896 PTGER2P43116 358 aa9.28□□□□□ -0.92
PCM1-220ENST00000523896 LSM11P83369 360 aaKnown RBP eCLIP9.28□□□□□ -0.92
PCM1-220ENST00000523896 ARHGAP33O14559 1287 aa9.27□□□□□ -0.93
PCM1-220ENST00000523896 EMILIN3Q9NT22 766 aa9.26□□□□□ -0.93
PCM1-220ENST00000523896 AXIN2Q9Y2T1 843 aa9.25□□□□□ -0.93
PCM1-220ENST00000523896 CAMK2BQ13554 666 aa9.24□□□□□ -0.93
PCM1-220ENST00000523896 JPH4Q96JJ6 628 aa9.24□□□□□ -0.93
PCM1-220ENST00000523896 DPYSL4O14531 572 aa9.23□□□□□ -0.93
PCM1-220ENST00000523896 ANO8Q9HCE9 1232 aaPredicted RBP9.23□□□□□ -0.93
PCM1-220ENST00000523896 MYT1LQ9UL68 1186 aa9.23□□□□□ -0.93
PCM1-220ENST00000523896 FOSBP53539 338 aa9.22□□□□□ -0.93
PCM1-220ENST00000523896 E2F4Q16254 413 aa9.22□□□□□ -0.93
PCM1-220ENST00000523896 STAC3Q96MF2 364 aa9.22□□□□□ -0.93
PCM1-220ENST00000523896 KCNK17Q96T54 332 aa9.22□□□□□ -0.93
PCM1-220ENST00000523896 RNF166Q96A37 237 aaPredicted RBP9.21□□□□□ -0.94
PCM1-220ENST00000523896 PTPREP23469 700 aa9.2□□□□□ -0.94
PCM1-220ENST00000523896 ZDHHC16Q969W1 377 aa9.2□□□□□ -0.94
PCM1-220ENST00000523896 PSEN2P49810 448 aa9.19□□□□□ -0.94
PCM1-220ENST00000523896 BCL2L12Q9HB09 334 aa9.19□□□□□ -0.94
PCM1-220ENST00000523896 TK2O00142 265 aa9.18□□□□□ -0.94
PCM1-220ENST00000523896 ADGRD1Q6QNK2 874 aa9.18□□□□□ -0.94
PCM1-220ENST00000523896 POTEEQ6S8J3 1075 aa9.18□□□□□ -0.94
PCM1-220ENST00000523896 TYW1BQ6NUM6 668 aa9.17□□□□□ -0.94
PCM1-220ENST00000523896 FBXW7Q969H0 707 aa9.17□□□□□ -0.94
PCM1-220ENST00000523896 SPDYE16A6NNV3 312 aaPredicted RBP9.16□□□□□ -0.94
PCM1-220ENST00000523896 PHF14O94880 888 aa9.16□□□□□ -0.94
PCM1-220ENST00000523896 DMRTA1Q5VZB9 504 aa9.15□□□□□ -0.94
PCM1-220ENST00000523896 EPAS1Q99814 870 aa9.15□□□□□ -0.94
PCM1-220ENST00000523896 BCANQ96GW7 911 aa9.13□□□□□ -0.95
PCM1-220ENST00000523896 ADAM33Q9BZ11 813 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms