RNA–Protein interactions for RNA: ENST00000523647.1

SMARCE1P4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4, humanhuman

BASIC

Gene SMARCE1P4, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P4-201ENST00000523647 CRISPLD2Q9H0B8 497 aa10.36□□□□□ -0.75
SMARCE1P4-201ENST00000523647 NCKAP5LQ9HCH0 1330 aa10.35□□□□□ -0.75
SMARCE1P4-201ENST00000523647 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.35□□□□□ -0.75
SMARCE1P4-201ENST00000523647 KIF3CO14782 793 aa10.34□□□□□ -0.75
SMARCE1P4-201ENST00000523647 SCUBE2Q9NQ36 999 aa10.34□□□□□ -0.75
SMARCE1P4-201ENST00000523647 OTUD5Q96G74 571 aa10.32□□□□□ -0.76
SMARCE1P4-201ENST00000523647 GPHNQ9NQX3 736 aaPredicted RBP10.31□□□□□ -0.76
SMARCE1P4-201ENST00000523647 PDE4AP27815 886 aa10.3□□□□□ -0.76
SMARCE1P4-201ENST00000523647 MFSD10Q14728 455 aa10.3□□□□□ -0.76
SMARCE1P4-201ENST00000523647 C2orf72A6NCS6 295 aa10.29□□□□□ -0.76
SMARCE1P4-201ENST00000523647 VSIG10Q8N0Z9 540 aa10.29□□□□□ -0.76
SMARCE1P4-201ENST00000523647 TMC2Q8TDI7 906 aa10.29□□□□□ -0.76
SMARCE1P4-201ENST00000523647 KDM2AQ9Y2K7 1162 aa10.27□□□□□ -0.77
SMARCE1P4-201ENST00000523647 FOXK1P85037 733 aa10.26□□□□□ -0.77
SMARCE1P4-201ENST00000523647 SLAIN1Q8ND83 568 aa10.26□□□□□ -0.77
SMARCE1P4-201ENST00000523647 LARP6Q9BRS8 491 aaKnown RBP10.26□□□□□ -0.77
SMARCE1P4-201ENST00000523647 DSG2Q14126 1118 aa10.24□□□□□ -0.77
SMARCE1P4-201ENST00000523647 DDX27Q96GQ7 796 aaKnown RBP10.24□□□□□ -0.77
SMARCE1P4-201ENST00000523647 PPP1R15BQ5SWA1 713 aa10.23□□□□□ -0.77
SMARCE1P4-201ENST00000523647 PLPP6Q8IY26 295 aa10.2□□□□□ -0.78
SMARCE1P4-201ENST00000523647 WDR70Q9NW82 654 aa10.18□□□□□ -0.78
SMARCE1P4-201ENST00000523647 CAMK2BQ13554 666 aa10.17□□□□□ -0.78
SMARCE1P4-201ENST00000523647 HOXB3P14651 431 aaPredicted RBP10.14□□□□□ -0.79
SMARCE1P4-201ENST00000523647 E2F4Q16254 413 aa10.14□□□□□ -0.79
SMARCE1P4-201ENST00000523647 SLC34A2O95436 690 aa10.13□□□□□ -0.79
SMARCE1P4-201ENST00000523647 KCNV2Q8TDN2 545 aa10.11□□□□□ -0.79
SMARCE1P4-201ENST00000523647 EMILIN3Q9NT22 766 aa10.11□□□□□ -0.79
SMARCE1P4-201ENST00000523647 SNPHO15079 494 aa10.1□□□□□ -0.79
SMARCE1P4-201ENST00000523647 DOK7Q18PE1 504 aa10.1□□□□□ -0.79
SMARCE1P4-201ENST00000523647 P3H3Q8IVL6 736 aa10.1□□□□□ -0.79
SMARCE1P4-201ENST00000523647 ARIH1Q9Y4X5 557 aaPredicted RBP10.1□□□□□ -0.79
SMARCE1P4-201ENST00000523647 OXER1Q8TDS5 423 aa10.09□□□□□ -0.79
SMARCE1P4-201ENST00000523647 PTCD2Q8WV60 388 aaKnown RBP10.09□□□□□ -0.79
SMARCE1P4-201ENST00000523647 ZSWIM6Q9HCJ5 1215 aa10.06□□□□□ -0.8
SMARCE1P4-201ENST00000523647 ARHGEF1Q92888 912 aaKnown RBP10.05□□□□□ -0.8
SMARCE1P4-201ENST00000523647 RIMBP2O15034 1052 aa10.04□□□□□ -0.8
SMARCE1P4-201ENST00000523647 UPF1Q92900 1129 aaKnown RBP eCLIP10.04□□□□□ -0.8
SMARCE1P4-201ENST00000523647 PCDHGA4Q9Y5G9 962 aa10.03□□□□□ -0.8
SMARCE1P4-201ENST00000523647 DPYSL4O14531 572 aa10.02□□□□□ -0.81
SMARCE1P4-201ENST00000523647 GPR153Q6NV75 609 aa10.02□□□□□ -0.81
SMARCE1P4-201ENST00000523647 ZNF710Q8N1W2 664 aa10.02□□□□□ -0.81
SMARCE1P4-201ENST00000523647 KDM4FA0A1W2PPD8 638 aa10□□□□□ -0.81
SMARCE1P4-201ENST00000523647 TBC1D12O60347 775 aa10□□□□□ -0.81
SMARCE1P4-201ENST00000523647 HOXB1P14653 301 aaPredicted RBP9.99□□□□□ -0.81
SMARCE1P4-201ENST00000523647 MAP3K9P80192 1104 aa9.99□□□□□ -0.81
SMARCE1P4-201ENST00000523647 PDIA6Q15084 440 aa9.99□□□□□ -0.81
SMARCE1P4-201ENST00000523647 ARSIQ5FYB1 569 aa9.99□□□□□ -0.81
SMARCE1P4-201ENST00000523647 ST18O60284 1047 aa9.98□□□□□ -0.81
SMARCE1P4-201ENST00000523647 LCE2DQ5TA82 110 aaPredicted RBP9.98□□□□□ -0.81
SMARCE1P4-201ENST00000523647 KHSRPQ92945 711 aaKnown RBP eCLIP9.97□□□□□ -0.81
SMARCE1P4-201ENST00000523647 SPDYE16A6NNV3 312 aaPredicted RBP9.96□□□□□ -0.82
SMARCE1P4-201ENST00000523647 EVI5O60447 810 aa9.95□□□□□ -0.82
SMARCE1P4-201ENST00000523647 ANO8Q9HCE9 1232 aaPredicted RBP9.95□□□□□ -0.82
SMARCE1P4-201ENST00000523647 NUDT7P0C024 238 aa9.94□□□□□ -0.82
SMARCE1P4-201ENST00000523647 FAM163AQ96GL9 167 aaPredicted RBP9.93□□□□□ -0.82
SMARCE1P4-201ENST00000523647 ZNF316A6NFI3 1004 aaPredicted RBP9.92□□□□□ -0.82
SMARCE1P4-201ENST00000523647 PTGER2P43116 358 aa9.9□□□□□ -0.82
SMARCE1P4-201ENST00000523647 SEMA3EO15041 775 aa9.88□□□□□ -0.83
SMARCE1P4-201ENST00000523647 NBR1Q14596 966 aa9.87□□□□□ -0.83
SMARCE1P4-201ENST00000523647 MARVELD3Q96A59 401 aa9.87□□□□□ -0.83
SMARCE1P4-201ENST00000523647 LHX6Q9UPM6 363 aa9.87□□□□□ -0.83
SMARCE1P4-201ENST00000523647 TESPA1A2RU30 521 aaPredicted RBP9.86□□□□□ -0.83
SMARCE1P4-201ENST00000523647 EMP3P54852 163 aa9.86□□□□□ -0.83
SMARCE1P4-201ENST00000523647 JPH4Q96JJ6 628 aa9.86□□□□□ -0.83
SMARCE1P4-201ENST00000523647 FOSBP53539 338 aa9.85□□□□□ -0.83
SMARCE1P4-201ENST00000523647 PSDA5PKW4 1024 aaPredicted RBP9.84□□□□□ -0.83
SMARCE1P4-201ENST00000523647 MLLT3P42568 568 aaPredicted RBP9.84□□□□□ -0.83
SMARCE1P4-201ENST00000523647 BCANQ96GW7 911 aa9.84□□□□□ -0.83
SMARCE1P4-201ENST00000523647 DDX12PQ92771 950 aa9.83□□□□□ -0.84
SMARCE1P4-201ENST00000523647 PHF14O94880 888 aa9.82□□□□□ -0.84
SMARCE1P4-201ENST00000523647 PCDHGA10Q9Y5H3 936 aa9.82□□□□□ -0.84
SMARCE1P4-201ENST00000523647 ERBB3P21860 1342 aa9.81□□□□□ -0.84
SMARCE1P4-201ENST00000523647 VARS2Q5ST30 1063 aaKnown RBP9.8□□□□□ -0.84
SMARCE1P4-201ENST00000523647 ZNF454Q8N9F8 522 aa9.8□□□□□ -0.84
SMARCE1P4-201ENST00000523647 EPAS1Q99814 870 aa9.8□□□□□ -0.84
SMARCE1P4-201ENST00000523647 POTEB3A0JP26 581 aa9.79□□□□□ -0.84
SMARCE1P4-201ENST00000523647 FAM205CA6NFA0 338 aa9.79□□□□□ -0.84
SMARCE1P4-201ENST00000523647 GRXCR2A6NFK2 248 aa9.79□□□□□ -0.84
SMARCE1P4-201ENST00000523647 OSBPP22059 807 aa9.79□□□□□ -0.84
SMARCE1P4-201ENST00000523647 POTEBQ6S5H4 581 aa9.79□□□□□ -0.84
SMARCE1P4-201ENST00000523647 PPP4R3BQ5MIZ7 849 aa9.78□□□□□ -0.84
SMARCE1P4-201ENST00000523647 TYW1BQ6NUM6 668 aa9.78□□□□□ -0.84
SMARCE1P4-201ENST00000523647 HS3ST6Q96QI5 342 aa9.78□□□□□ -0.84
SMARCE1P4-201ENST00000523647 PRIM1P49642 420 aaKnown RBP9.77□□□□□ -0.85
SMARCE1P4-201ENST00000523647 FBXW7Q969H0 707 aa9.77□□□□□ -0.85
SMARCE1P4-201ENST00000523647 ZDHHC16Q969W1 377 aa9.77□□□□□ -0.85
SMARCE1P4-201ENST00000523647 EN1Q05925 392 aaPredicted RBP9.76□□□□□ -0.85
SMARCE1P4-201ENST00000523647 SMYD5Q6GMV2 418 aa9.76□□□□□ -0.85
SMARCE1P4-201ENST00000523647 POTEGQ6S5H5 508 aa9.74□□□□□ -0.85
SMARCE1P4-201ENST00000523647 ADAM33Q9BZ11 813 aa9.74□□□□□ -0.85
SMARCE1P4-201ENST00000523647 BCL2L12Q9HB09 334 aa9.74□□□□□ -0.85
SMARCE1P4-201ENST00000523647 POTEMA6NI47 508 aa9.73□□□□□ -0.85
SMARCE1P4-201ENST00000523647 ZNF687Q8N1G0 1237 aa9.73□□□□□ -0.85
SMARCE1P4-201ENST00000523647 TULP1O00294 542 aaPredicted RBP9.71□□□□□ -0.86
SMARCE1P4-201ENST00000523647 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.71□□□□□ -0.86
SMARCE1P4-201ENST00000523647 MAP3K7O43318 606 aa9.7□□□□□ -0.86
SMARCE1P4-201ENST00000523647 RBM26Q5T8P6 1007 aaKnown RBP9.7□□□□□ -0.86
SMARCE1P4-201ENST00000523647 POTEEQ6S8J3 1075 aa9.7□□□□□ -0.86
SMARCE1P4-201ENST00000523647 RBM33Q96EV2 1170 aaKnown RBP9.7□□□□□ -0.86
SMARCE1P4-201ENST00000523647 PBX2P40425 430 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms