RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	TPRN	Q4KMQ1	711 aa		10.72	□□□□□ -0.69
CTNNA1-238	ENST00000523298	PLCG2	P16885	1265 aa		10.71	□□□□□ -0.69
CTNNA1-238	ENST00000523298	P3H3	Q8IVL6	736 aa		10.71	□□□□□ -0.69
CTNNA1-238	ENST00000523298	DDX27	Q96GQ7	796 aa	Known RBP	10.71	□□□□□ -0.69
CTNNA1-238	ENST00000523298	GPHN	Q9NQX3	736 aa	Predicted RBP	10.71	□□□□□ -0.69
CTNNA1-238	ENST00000523298	BOLA1	Q9Y3E2	137 aa		10.71	□□□□□ -0.69
CTNNA1-238	ENST00000523298	DSG2	Q14126	1118 aa		10.7	□□□□□ -0.7
CTNNA1-238	ENST00000523298	CAMK2B	Q13554	666 aa		10.69	□□□□□ -0.7
CTNNA1-238	ENST00000523298	METRN	Q9UJH8	293 aa		10.69	□□□□□ -0.7
CTNNA1-238	ENST00000523298	KIF3C	O14782	793 aa		10.68	□□□□□ -0.7
CTNNA1-238	ENST00000523298	PPP1R15B	Q5SWA1	713 aa		10.67	□□□□□ -0.7
CTNNA1-238	ENST00000523298	SLC39A7	Q92504	469 aa		10.67	□□□□□ -0.7
CTNNA1-238	ENST00000523298	C2orf72	A6NCS6	295 aa		10.66	□□□□□ -0.7
CTNNA1-238	ENST00000523298	ARHGEF1	Q92888	912 aa	Known RBP	10.66	□□□□□ -0.7
CTNNA1-238	ENST00000523298	SEC24B	O95487	1268 aa		10.65	□□□□□ -0.7
CTNNA1-238	ENST00000523298	C7	P10643	843 aa		10.65	□□□□□ -0.7
CTNNA1-238	ENST00000523298	EMILIN3	Q9NT22	766 aa		10.65	□□□□□ -0.7
CTNNA1-238	ENST00000523298	SEMA3E	O15041	775 aa		10.64	□□□□□ -0.71
CTNNA1-238	ENST00000523298	FOXK1	P85037	733 aa		10.62	□□□□□ -0.71
CTNNA1-238	ENST00000523298	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.61	□□□□□ -0.71
CTNNA1-238	ENST00000523298	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.6	□□□□□ -0.71
CTNNA1-238	ENST00000523298	POTEJ	P0CG39	1038 aa		10.59	□□□□□ -0.71
CTNNA1-238	ENST00000523298	PLPP6	Q8IY26	295 aa		10.59	□□□□□ -0.71
CTNNA1-238	ENST00000523298	TMC2	Q8TDI7	906 aa		10.59	□□□□□ -0.71
CTNNA1-238	ENST00000523298	TESPA1	A2RU30	521 aa	Predicted RBP	10.58	□□□□□ -0.72
CTNNA1-238	ENST00000523298	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.58	□□□□□ -0.72
CTNNA1-238	ENST00000523298	POTEB2	H3BUK9	544 aa		10.57	□□□□□ -0.72
CTNNA1-238	ENST00000523298	DPYSL4	O14531	572 aa		10.56	□□□□□ -0.72
CTNNA1-238	ENST00000523298		G3V3G9	751 aa		10.53	□□□□□ -0.72
CTNNA1-238	ENST00000523298	MLLT3	P42568	568 aa	Predicted RBP	10.53	□□□□□ -0.72
CTNNA1-238	ENST00000523298	LMOD2	Q6P5Q4	547 aa		10.53	□□□□□ -0.72
CTNNA1-238	ENST00000523298	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
CTNNA1-238	ENST00000523298	PDIA6	Q15084	440 aa		10.47	□□□□□ -0.73
CTNNA1-238	ENST00000523298	OXER1	Q8TDS5	423 aa		10.47	□□□□□ -0.73
CTNNA1-238	ENST00000523298	C3orf67	Q6ZVT6	689 aa		10.46	□□□□□ -0.73
CTNNA1-238	ENST00000523298	RBM26	Q5T8P6	1007 aa	Known RBP	10.43	□□□□□ -0.74
CTNNA1-238	ENST00000523298	ZC3H15	Q8WU90	426 aa	Known RBP	10.42	□□□□□ -0.74
CTNNA1-238	ENST00000523298	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.39	□□□□□ -0.75
CTNNA1-238	ENST00000523298	PRIM1	P49642	420 aa	Known RBP	10.39	□□□□□ -0.75
CTNNA1-238	ENST00000523298	MAP3K9	P80192	1104 aa		10.39	□□□□□ -0.75
CTNNA1-238	ENST00000523298	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.39	□□□□□ -0.75
CTNNA1-238	ENST00000523298	PTCD2	Q8WV60	388 aa	Known RBP	10.37	□□□□□ -0.75
CTNNA1-238	ENST00000523298	SLC34A2	O95436	690 aa		10.35	□□□□□ -0.75
CTNNA1-238	ENST00000523298	EVI5	O60447	810 aa		10.34	□□□□□ -0.75
CTNNA1-238	ENST00000523298	HOXB3	P14651	431 aa	Predicted RBP	10.34	□□□□□ -0.75
CTNNA1-238	ENST00000523298	DDX12P	Q92771	950 aa		10.34	□□□□□ -0.75
CTNNA1-238	ENST00000523298	KDM4F	A0A1W2PPD8	638 aa		10.33	□□□□□ -0.76
CTNNA1-238	ENST00000523298	GRXCR2	A6NFK2	248 aa		10.33	□□□□□ -0.76
CTNNA1-238	ENST00000523298	GPR37	O15354	613 aa		10.33	□□□□□ -0.76
CTNNA1-238	ENST00000523298	OSBP	P22059	807 aa		10.32	□□□□□ -0.76
CTNNA1-238	ENST00000523298	ZMYND10	O75800	440 aa		10.31	□□□□□ -0.76
CTNNA1-238	ENST00000523298	PTGER2	P43116	358 aa		10.31	□□□□□ -0.76
CTNNA1-238	ENST00000523298	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.31	□□□□□ -0.76
CTNNA1-238	ENST00000523298	TULP1	O00294	542 aa	Predicted RBP	10.3	□□□□□ -0.76
CTNNA1-238	ENST00000523298	LHX8	Q68G74	356 aa		10.3	□□□□□ -0.76
CTNNA1-238	ENST00000523298	SMYD5	Q6GMV2	418 aa		10.3	□□□□□ -0.76
CTNNA1-238	ENST00000523298	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.3	□□□□□ -0.76
CTNNA1-238	ENST00000523298	PCDHGA4	Q9Y5G9	962 aa		10.3	□□□□□ -0.76
CTNNA1-238	ENST00000523298	SLAIN1	Q8ND83	568 aa		10.29	□□□□□ -0.76
CTNNA1-238	ENST00000523298	SLC24A3	Q9HC58	644 aa		10.29	□□□□□ -0.76
CTNNA1-238	ENST00000523298	GPIHBP1	Q8IV16	184 aa		10.27	□□□□□ -0.77
CTNNA1-238	ENST00000523298	TBC1D12	O60347	775 aa		10.25	□□□□□ -0.77
CTNNA1-238	ENST00000523298	BARGIN	Q6ZT62	677 aa		10.25	□□□□□ -0.77
CTNNA1-238	ENST00000523298	OTUD5	Q96G74	571 aa		10.25	□□□□□ -0.77
CTNNA1-238	ENST00000523298	ARSI	Q5FYB1	569 aa		10.23	□□□□□ -0.77
CTNNA1-238	ENST00000523298	FECH	P22830	423 aa		10.22	□□□□□ -0.77
CTNNA1-238	ENST00000523298	GPR153	Q6NV75	609 aa		10.22	□□□□□ -0.77
CTNNA1-238	ENST00000523298	PCDHGA10	Q9Y5H3	936 aa		10.22	□□□□□ -0.77
CTNNA1-238	ENST00000523298	NUDT7	P0C024	238 aa		10.21	□□□□□ -0.77
CTNNA1-238	ENST00000523298	CDHR5	Q9HBB8	845 aa		10.21	□□□□□ -0.77
CTNNA1-238	ENST00000523298	SCUBE2	Q9NQ36	999 aa		10.21	□□□□□ -0.77
CTNNA1-238	ENST00000523298	NUTM2F	A1L443	756 aa		10.2	□□□□□ -0.78
CTNNA1-238	ENST00000523298	BRPF1	P55201	1214 aa	Predicted RBP	10.19	□□□□□ -0.78
CTNNA1-238	ENST00000523298	TSR1	Q2NL82	804 aa	Known RBP	10.17	□□□□□ -0.78
CTNNA1-238	ENST00000523298	MAMSTR	Q6ZN01	415 aa		10.17	□□□□□ -0.78
CTNNA1-238	ENST00000523298	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.17	□□□□□ -0.78
CTNNA1-238	ENST00000523298	PHF14	O94880	888 aa		10.16	□□□□□ -0.78
CTNNA1-238	ENST00000523298	EN1	Q05925	392 aa	Predicted RBP	10.16	□□□□□ -0.78
CTNNA1-238	ENST00000523298	DOK7	Q18PE1	504 aa		10.16	□□□□□ -0.78
CTNNA1-238	ENST00000523298	RBM33	Q96EV2	1170 aa	Known RBP	10.16	□□□□□ -0.78
CTNNA1-238	ENST00000523298	FOSB	P53539	338 aa		10.15	□□□□□ -0.78
CTNNA1-238	ENST00000523298	PTGDR	Q13258	359 aa		10.14	□□□□□ -0.79
CTNNA1-238	ENST00000523298	JPH4	Q96JJ6	628 aa		10.13	□□□□□ -0.79
CTNNA1-238	ENST00000523298	LHX6	Q9UPM6	363 aa		10.12	□□□□□ -0.79
CTNNA1-238	ENST00000523298	EPAS1	Q99814	870 aa		10.11	□□□□□ -0.79
CTNNA1-238	ENST00000523298	ADAM33	Q9BZ11	813 aa		10.11	□□□□□ -0.79
CTNNA1-238	ENST00000523298	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.1	□□□□□ -0.79
CTNNA1-238	ENST00000523298	TRIM66	O15016	1216 aa		10.1	□□□□□ -0.79
CTNNA1-238	ENST00000523298	GNPAT	O15228	680 aa		10.1	□□□□□ -0.79
CTNNA1-238	ENST00000523298	MAP3K7	O43318	606 aa		10.1	□□□□□ -0.79
CTNNA1-238	ENST00000523298	TYW1B	Q6NUM6	668 aa		10.1	□□□□□ -0.79
CTNNA1-238	ENST00000523298	ZSWIM6	Q9HCJ5	1215 aa		10.1	□□□□□ -0.79
CTNNA1-238	ENST00000523298	ZNF454	Q8N9F8	522 aa		10.09	□□□□□ -0.79
CTNNA1-238	ENST00000523298	AK7	Q96M32	723 aa		10.09	□□□□□ -0.79
CTNNA1-238	ENST00000523298	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.09	□□□□□ -0.79
CTNNA1-238	ENST00000523298	FCHSD2	O94868	740 aa		10.08	□□□□□ -0.8
CTNNA1-238	ENST00000523298	HIC1	Q14526	733 aa		10.08	□□□□□ -0.8
CTNNA1-238	ENST00000523298	KRI1	Q8N9T8	703 aa	Known RBP	10.08	□□□□□ -0.8
CTNNA1-238	ENST00000523298	CCDC102A	Q96A19	550 aa		10.08	□□□□□ -0.8
CTNNA1-238	ENST00000523298	ZNF710	Q8N1W2	664 aa		10.07	□□□□□ -0.8

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