RNA–Protein interactions for RNA: ENST00000523139.5

BRD9-219, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-219ENST00000523139 CFAP74Q9C0B2 1584 aa9.73□□□□□ -0.85
BRD9-219ENST00000523139 PHLDB1Q86UU1 1377 aa9.73□□□□□ -0.85
BRD9-219ENST00000523139 CCNB3Q8WWL7 1395 aa9.73□□□□□ -0.85
BRD9-219ENST00000523139 CDC42BPBQ9Y5S2 1711 aa9.73□□□□□ -0.85
BRD9-219ENST00000523139 FGD6Q6ZV73 1430 aa9.73□□□□□ -0.85
BRD9-219ENST00000523139 KIF13AQ9H1H9 1805 aa9.72□□□□□ -0.85
BRD9-219ENST00000523139 PLEKHH2Q8IVE3 1493 aa9.71□□□□□ -0.86
BRD9-219ENST00000523139 NEO1Q92859 1461 aa9.71□□□□□ -0.86
BRD9-219ENST00000523139 ARID3CA6NKF2 412 aa9.7□□□□□ -0.86
BRD9-219ENST00000523139 KIAA1107Q9UPP5 1409 aa9.7□□□□□ -0.86
BRD9-219ENST00000523139 RSPH4AQ5TD94 716 aa9.69□□□□□ -0.86
BRD9-219ENST00000523139 CD109Q6YHK3 1445 aa9.69□□□□□ -0.86
BRD9-219ENST00000523139 PTPN23Q9H3S7 1636 aa9.69□□□□□ -0.86
BRD9-219ENST00000523139 ARHGEF5Q12774 1597 aa9.68□□□□□ -0.86
BRD9-219ENST00000523139 TEX14Q8IWB6 1497 aa9.68□□□□□ -0.86
BRD9-219ENST00000523139 EFCAB2Q5VUJ9 269 aa9.67□□□□□ -0.86
BRD9-219ENST00000523139 KCNH8Q96L42 1107 aa9.67□□□□□ -0.86
BRD9-219ENST00000523139 CFDP1Q9UEE9 299 aaPredicted RBP9.67□□□□□ -0.86
BRD9-219ENST00000523139 PPRC1Q5VV67 1664 aaKnown RBP9.67□□□□□ -0.86
BRD9-219ENST00000523139 SAMD9LQ8IVG5 1584 aa9.67□□□□□ -0.86
BRD9-219ENST00000523139 FANCAO15360 1455 aa9.66□□□□□ -0.86
BRD9-219ENST00000523139 TRIM26Q12899 539 aaPredicted RBP9.66□□□□□ -0.86
BRD9-219ENST00000523139 PIAS4Q8N2W9 510 aaPredicted RBP9.66□□□□□ -0.86
BRD9-219ENST00000523139 ABCC1P33527 1531 aa9.66□□□□□ -0.86
BRD9-219ENST00000523139 ARHGAP5Q13017 1502 aa9.66□□□□□ -0.86
BRD9-219ENST00000523139 CAMSAP2Q08AD1 1489 aa9.66□□□□□ -0.86
BRD9-219ENST00000523139 DNMT1P26358 1616 aaKnown RBP9.65□□□□□ -0.86
BRD9-219ENST00000523139 MBD5Q9P267 1494 aa9.65□□□□□ -0.87
BRD9-219ENST00000523139 SHANK2Q9UPX8 1470 aa9.65□□□□□ -0.87
BRD9-219ENST00000523139 MAST1Q9Y2H9 1570 aa9.64□□□□□ -0.87
BRD9-219ENST00000523139 FAM69CQ0P6D2 419 aa9.64□□□□□ -0.87
BRD9-219ENST00000523139 AKNAQ7Z591 1439 aa9.64□□□□□ -0.87
BRD9-219ENST00000523139 CROCC2H7BZ55 1655 aa9.63□□□□□ -0.87
BRD9-219ENST00000523139 RTEL1-TNFRSF6BF6WH68 1400 aa9.62□□□□□ -0.87
BRD9-219ENST00000523139 CCDC141Q6ZP82 1450 aa9.61□□□□□ -0.87
BRD9-219ENST00000523139 PPARGC1BQ86YN6 1023 aaKnown RBP9.61□□□□□ -0.87
BRD9-219ENST00000523139 KDM5CP41229 1560 aa9.61□□□□□ -0.87
BRD9-219ENST00000523139 ROCK1Q13464 1354 aa9.61□□□□□ -0.87
BRD9-219ENST00000523139 ADGRL1O94910 1474 aa9.6□□□□□ -0.87
BRD9-219ENST00000523139 ADGRL2O95490 1459 aa9.6□□□□□ -0.87
BRD9-219ENST00000523139 ZNF518AQ6AHZ1 1483 aa9.6□□□□□ -0.87
BRD9-219ENST00000523139 ACIN1Q9UKV3 1341 aaKnown RBP9.6□□□□□ -0.87
BRD9-219ENST00000523139 DAPK1P53355 1430 aa9.6□□□□□ -0.87
BRD9-219ENST00000523139 SYCP2Q9BX26 1530 aa9.6□□□□□ -0.87
BRD9-219ENST00000523139 RICTORQ6R327 1708 aa9.59□□□□□ -0.87
BRD9-219ENST00000523139 ABCC5O15440 1437 aa9.59□□□□□ -0.87
BRD9-219ENST00000523139 ZMYM4Q5VZL5 1548 aa9.59□□□□□ -0.87
BRD9-219ENST00000523139 ARHGEF12Q9NZN5 1544 aa9.59□□□□□ -0.87
BRD9-219ENST00000523139 MAGI2Q86UL8 1455 aa9.59□□□□□ -0.87
BRD9-219ENST00000523139 MLH3Q9UHC1 1453 aa9.59□□□□□ -0.87
BRD9-219ENST00000523139 PLXNC1O60486 1568 aa9.58□□□□□ -0.88
BRD9-219ENST00000523139 ADGBQ8N7X0 1667 aa9.58□□□□□ -0.88
BRD9-219ENST00000523139 POGZQ7Z3K3 1410 aa9.58□□□□□ -0.88
BRD9-219ENST00000523139 SCAPERQ9BY12 1400 aa9.58□□□□□ -0.88
BRD9-219ENST00000523139 DENND4BO75064 1496 aaPredicted RBP9.58□□□□□ -0.88
BRD9-219ENST00000523139 INO80Q9ULG1 1556 aaPredicted RBP9.58□□□□□ -0.88
BRD9-219ENST00000523139 HRCP23327 699 aa9.57□□□□□ -0.88
BRD9-219ENST00000523139 ZNF644Q9H582 1327 aaPredicted RBP9.56□□□□□ -0.88
BRD9-219ENST00000523139 TSPOAP1O95153 1857 aa9.56□□□□□ -0.88
BRD9-219ENST00000523139 HFM1A2PYH4 1435 aa9.56□□□□□ -0.88
BRD9-219ENST00000523139 NCOA1Q15788 1441 aa9.56□□□□□ -0.88
BRD9-219ENST00000523139 GCC2Q8IWJ2 1684 aa9.55□□□□□ -0.88
BRD9-219ENST00000523139 FRMPD1Q5SYB0 1578 aa9.55□□□□□ -0.88
BRD9-219ENST00000523139 TSPY4P0CV99 314 aa9.55□□□□□ -0.88
BRD9-219ENST00000523139 TSPY10P0CW01 314 aa9.55□□□□□ -0.88
BRD9-219ENST00000523139 FAM50AQ14320 339 aaKnown RBP9.55□□□□□ -0.88
BRD9-219ENST00000523139 ZFYVE16Q7Z3T8 1539 aa9.55□□□□□ -0.88
BRD9-219ENST00000523139 PTPRKQ15262 1439 aa9.55□□□□□ -0.88
BRD9-219ENST00000523139 C9orf84Q5VXU9 1444 aa9.55□□□□□ -0.88
BRD9-219ENST00000523139 TRAPPC8Q9Y2L5 1435 aa9.55□□□□□ -0.88
BRD9-219ENST00000523139 HECW2Q9P2P5 1572 aa9.54□□□□□ -0.88
BRD9-219ENST00000523139 REREQ9P2R6 1566 aa9.54□□□□□ -0.88
BRD9-219ENST00000523139 ZNF777Q9ULD5 760 aaPredicted RBP9.54□□□□□ -0.88
BRD9-219ENST00000523139 KIDINS220Q9ULH0 1771 aa9.54□□□□□ -0.88
BRD9-219ENST00000523139 BCORL1Q5H9F3 1711 aa9.53□□□□□ -0.88
BRD9-219ENST00000523139 ANKRD30AQ9BXX3 1397 aa9.53□□□□□ -0.88
BRD9-219ENST00000523139 ATP7AQ04656 1500 aa9.53□□□□□ -0.88
BRD9-219ENST00000523139 HNRNPMP52272 730 aaKnown RBP eCLIP9.53□□□□□ -0.886e-8■■■■□ 21.1
BRD9-219ENST00000523139 DUOX2Q9NRD8 1548 aa9.51□□□□□ -0.89
BRD9-219ENST00000523139 NAIPQ13075 1403 aa9.51□□□□□ -0.89
BRD9-219ENST00000523139 TRHP20396 242 aaPredicted RBP9.51□□□□□ -0.89
BRD9-219ENST00000523139 EIF2AK4Q9P2K8 1649 aaKnown RBP9.51□□□□□ -0.89
BRD9-219ENST00000523139 COL17A1Q9UMD9 1497 aaPredicted RBP9.51□□□□□ -0.89
BRD9-219ENST00000523139 SPAG9O60271 1321 aaKnown RBP9.51□□□□□ -0.89
BRD9-219ENST00000523139 ERBINQ96RT1 1412 aa9.5□□□□□ -0.89
BRD9-219ENST00000523139 KDM6BO15054 1643 aa9.5□□□□□ -0.89
BRD9-219ENST00000523139 SETD5Q9C0A6 1442 aa9.49□□□□□ -0.89
BRD9-219ENST00000523139 AFAP1Q8N556 730 aa9.49□□□□□ -0.89
BRD9-219ENST00000523139 AGLP35573 1532 aa9.48□□□□□ -0.89
BRD9-219ENST00000523139 ARHGEF40Q8TER5 1519 aa9.48□□□□□ -0.89
BRD9-219ENST00000523139 DIP2CQ9Y2E4 1556 aa9.48□□□□□ -0.89
BRD9-219ENST00000523139 DHX29Q7Z478 1369 aaKnown RBP9.48□□□□□ -0.89
BRD9-219ENST00000523139 KIF15Q9NS87 1388 aa9.48□□□□□ -0.89
BRD9-219ENST00000523139 FAM135AQ9P2D6 1515 aa9.47□□□□□ -0.89
BRD9-219ENST00000523139 DEPDC5O75140 1603 aa9.47□□□□□ -0.89
BRD9-219ENST00000523139 ABCA6Q8N139 1617 aa9.47□□□□□ -0.89
BRD9-219ENST00000523139 ANKRD50Q9ULJ7 1429 aa9.47□□□□□ -0.89
BRD9-219ENST00000523139 ATP10AO60312 1499 aa9.47□□□□□ -0.89
BRD9-219ENST00000523139 RAPGEF3O95398 923 aa9.46□□□□□ -0.9
BRD9-219ENST00000523139 PCGF6Q9BYE7 350 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms