RNA–Protein interactions for RNA: ENST00000522777.1

PCM1-216, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-216ENST00000522777 GPHNQ9NQX3 736 aaPredicted RBP13.09□□□□□ -0.31
PCM1-216ENST00000522777 PPP1R15BQ5SWA1 713 aa13.06□□□□□ -0.32
PCM1-216ENST00000522777 IER5LQ5T953 404 aa13.05□□□□□ -0.32
PCM1-216ENST00000522777 TMEM121BQ9BXQ6 578 aaPredicted RBP13.03□□□□□ -0.32
PCM1-216ENST00000522777 TULP1O00294 542 aaPredicted RBP13.02□□□□□ -0.33
PCM1-216ENST00000522777 OCEL1Q9H607 264 aa13.02□□□□□ -0.33
PCM1-216ENST00000522777 DSG2Q14126 1118 aa13□□□□□ -0.33
PCM1-216ENST00000522777 GABBR2O75899 941 aa12.99□□□□□ -0.33
PCM1-216ENST00000522777 CCDC180Q9P1Z9 1646 aa12.99□□□□□ -0.33
PCM1-216ENST00000522777 BOLA1Q9Y3E2 137 aa12.98□□□□□ -0.33
PCM1-216ENST00000522777 ZC3H15Q8WU90 426 aaKnown RBP12.97□□□□□ -0.33
PCM1-216ENST00000522777 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
PCM1-216ENST00000522777 FOXK1P85037 733 aa12.96□□□□□ -0.33
PCM1-216ENST00000522777 KIF3CO14782 793 aa12.95□□□□□ -0.34
PCM1-216ENST00000522777 PELP1Q8IZL8 1130 aaKnown RBP12.94□□□□□ -0.34
PCM1-216ENST00000522777 TMC2Q8TDI7 906 aa12.94□□□□□ -0.34
PCM1-216ENST00000522777 PLCG2P16885 1265 aa12.93□□□□□ -0.34
PCM1-216ENST00000522777 C2orf72A6NCS6 295 aa12.91□□□□□ -0.34
PCM1-216ENST00000522777 DPYSL4O14531 572 aa12.91□□□□□ -0.34
PCM1-216ENST00000522777 SMYD5Q6GMV2 418 aa12.91□□□□□ -0.34
PCM1-216ENST00000522777 MLLT3P42568 568 aaPredicted RBP12.9□□□□□ -0.34
PCM1-216ENST00000522777 PDIA6Q15084 440 aa12.89□□□□□ -0.35
PCM1-216ENST00000522777 COLQQ9Y215 455 aaPredicted RBP12.89□□□□□ -0.35
PCM1-216ENST00000522777 TMEM92Q6UXU6 159 aa12.87□□□□□ -0.35
PCM1-216ENST00000522777 PLPP6Q8IY26 295 aa12.87□□□□□ -0.35
PCM1-216ENST00000522777 G3V3G9 751 aa12.86□□□□□ -0.35
PCM1-216ENST00000522777 L3MBTL3Q96JM7 780 aaPredicted RBP12.86□□□□□ -0.35
PCM1-216ENST00000522777 POTEFA5A3E0 1075 aa12.85□□□□□ -0.35
PCM1-216ENST00000522777 DCBLD2Q96PD2 775 aa12.85□□□□□ -0.35
PCM1-216ENST00000522777 SPDYE16A6NNV3 312 aaPredicted RBP12.84□□□□□ -0.35
PCM1-216ENST00000522777 ZMYND10O75800 440 aa12.83□□□□□ -0.36
PCM1-216ENST00000522777 POTEHQ6S545 545 aa12.83□□□□□ -0.36
PCM1-216ENST00000522777 SEC24BO95487 1268 aa12.82□□□□□ -0.36
PCM1-216ENST00000522777 RBM26Q5T8P6 1007 aaKnown RBP12.82□□□□□ -0.36
PCM1-216ENST00000522777 SLC39A7Q92504 469 aa12.82□□□□□ -0.36
PCM1-216ENST00000522777 SLC24A3Q9HC58 644 aa12.8□□□□□ -0.36
PCM1-216ENST00000522777 POTEIP0CG38 1075 aa12.78□□□□□ -0.36
PCM1-216ENST00000522777 C7P10643 843 aa12.77□□□□□ -0.37
PCM1-216ENST00000522777 BRPF1P55201 1214 aaPredicted RBP12.77□□□□□ -0.37
PCM1-216ENST00000522777 BARGINQ6ZT62 677 aa12.76□□□□□ -0.37
PCM1-216ENST00000522777 GPIHBP1Q8IV16 184 aa12.76□□□□□ -0.37
PCM1-216ENST00000522777 METRNQ9UJH8 293 aa12.75□□□□□ -0.37
PCM1-216ENST00000522777 OXER1Q8TDS5 423 aa12.74□□□□□ -0.37
PCM1-216ENST00000522777 TMEM132AQ24JP5 1023 aa12.73□□□□□ -0.37
PCM1-216ENST00000522777 MAP3K9P80192 1104 aa12.71□□□□□ -0.37
PCM1-216ENST00000522777 UPF1Q92900 1129 aaKnown RBP eCLIP12.71□□□□□ -0.37
PCM1-216ENST00000522777 GPR37O15354 613 aa12.7□□□□□ -0.38
PCM1-216ENST00000522777 C3orf67Q6ZVT6 689 aa12.66□□□□□ -0.38
PCM1-216ENST00000522777 GRXCR2A6NFK2 248 aa12.65□□□□□ -0.38
PCM1-216ENST00000522777 PTGER2P43116 358 aa12.65□□□□□ -0.38
PCM1-216ENST00000522777 NEUROD2Q15784 382 aa12.65□□□□□ -0.38
PCM1-216ENST00000522777 SP7Q8TDD2 431 aaPredicted RBP12.65□□□□□ -0.38
PCM1-216ENST00000522777 OSBPP22059 807 aa12.63□□□□□ -0.39
PCM1-216ENST00000522777 PTCD2Q8WV60 388 aaKnown RBP12.63□□□□□ -0.39
PCM1-216ENST00000522777 AK7Q96M32 723 aa12.61□□□□□ -0.39
PCM1-216ENST00000522777 RB1CC1Q8TDY2 1594 aa12.6□□□□□ -0.39
PCM1-216ENST00000522777 EVI5O60447 810 aa12.6□□□□□ -0.39
PCM1-216ENST00000522777 SLC34A2O95436 690 aa12.6□□□□□ -0.39
PCM1-216ENST00000522777 PRIM1P49642 420 aaKnown RBP12.59□□□□□ -0.39
PCM1-216ENST00000522777 GTF3C3Q9Y5Q9 886 aa12.59□□□□□ -0.39
PCM1-216ENST00000522777 TBC1D12O60347 775 aa12.58□□□□□ -0.4
PCM1-216ENST00000522777 DDX12PQ92771 950 aa12.58□□□□□ -0.4
PCM1-216ENST00000522777 KRI1Q8N9T8 703 aaKnown RBP12.56□□□□□ -0.4
PCM1-216ENST00000522777 NUTM2FA1L443 756 aa12.54□□□□□ -0.4
PCM1-216ENST00000522777 ANO8Q9HCE9 1232 aaPredicted RBP12.54□□□□□ -0.4
PCM1-216ENST00000522777 TRIM66O15016 1216 aa12.53□□□□□ -0.4
PCM1-216ENST00000522777 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.53□□□□□ -0.4
PCM1-216ENST00000522777 ZNF316A6NFI3 1004 aaPredicted RBP12.51□□□□□ -0.41
PCM1-216ENST00000522777 GPBP1L1Q9HC44 474 aaPredicted RBP12.5□□□□□ -0.41
PCM1-216ENST00000522777 TIMELESSQ9UNS1 1208 aa12.5□□□□□ -0.41
PCM1-216ENST00000522777 MAP2K5Q13163 448 aa12.49□□□□□ -0.41
PCM1-216ENST00000522777 MINK1Q8N4C8 1332 aaPredicted RBP12.48□□□□□ -0.41
PCM1-216ENST00000522777 GNPATO15228 680 aa12.48□□□□□ -0.41
PCM1-216ENST00000522777 FCHSD2O94868 740 aa12.48□□□□□ -0.41
PCM1-216ENST00000522777 PDE4DQ08499 809 aa12.48□□□□□ -0.41
PCM1-216ENST00000522777 HIC1Q14526 733 aa12.47□□□□□ -0.41
PCM1-216ENST00000522777 CCDC102AQ96A19 550 aa12.47□□□□□ -0.41
PCM1-216ENST00000522777 PCDHGA4Q9Y5G9 962 aa12.47□□□□□ -0.41
PCM1-216ENST00000522777 KDM4FA0A1W2PPD8 638 aa12.46□□□□□ -0.41
PCM1-216ENST00000522777 POTEJP0CG39 1038 aa12.46□□□□□ -0.41
PCM1-216ENST00000522777 FECHP22830 423 aa12.46□□□□□ -0.41
PCM1-216ENST00000522777 PTGDRQ13258 359 aa12.46□□□□□ -0.41
PCM1-216ENST00000522777 PHF14O94880 888 aa12.45□□□□□ -0.42
PCM1-216ENST00000522777 KDM4CQ9H3R0 1056 aa12.45□□□□□ -0.42
PCM1-216ENST00000522777 IRF6O14896 467 aa12.44□□□□□ -0.42
PCM1-216ENST00000522777 EN1Q05925 392 aaPredicted RBP12.44□□□□□ -0.42
PCM1-216ENST00000522777 CDHR5Q9HBB8 845 aa12.43□□□□□ -0.42
PCM1-216ENST00000522777 EPAS1Q99814 870 aa12.42□□□□□ -0.42
PCM1-216ENST00000522777 NACADO15069 1562 aa12.42□□□□□ -0.42
PCM1-216ENST00000522777 PCDHGA10Q9Y5H3 936 aa12.41□□□□□ -0.42
PCM1-216ENST00000522777 AMHR2Q16671 573 aa12.4□□□□□ -0.42
PCM1-216ENST00000522777 NPDC1Q9NQX5 325 aaPredicted RBP12.4□□□□□ -0.42
PCM1-216ENST00000522777 POTEB2H3BUK9 544 aa12.39□□□□□ -0.43
PCM1-216ENST00000522777 SLAIN1Q8ND83 568 aa12.37□□□□□ -0.43
PCM1-216ENST00000522777 JPH4Q96JJ6 628 aa12.37□□□□□ -0.43
PCM1-216ENST00000522777 HOXB3P14651 431 aaPredicted RBP12.36□□□□□ -0.43
PCM1-216ENST00000522777 TSR1Q2NL82 804 aaKnown RBP12.36□□□□□ -0.43
PCM1-216ENST00000522777 TYW1BQ6NUM6 668 aa12.36□□□□□ -0.43
PCM1-216ENST00000522777 MAP3K7O43318 606 aa12.35□□□□□ -0.43
PCM1-216ENST00000522777 PARP9Q8IXQ6 854 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms