RNA–Protein interactions for RNA: ENST00000522514.5

PCMTD1-207, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PCMTD1, Length 1,287 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-207ENST00000522514 TIAM1Q13009 1591 aa22.67■■□□□ 1.22
PCMTD1-207ENST00000522514 PPP6R1Q9UPN7 881 aa22.66■■□□□ 1.22
PCMTD1-207ENST00000522514 ARHGAP5Q13017 1502 aa22.66■■□□□ 1.22
PCMTD1-207ENST00000522514 EHBP1L1Q8N3D4 1523 aa22.66■■□□□ 1.22
PCMTD1-207ENST00000522514 PHLDB1Q86UU1 1377 aa22.65■■□□□ 1.22
PCMTD1-207ENST00000522514 RAPGEF3O95398 923 aa22.64■■□□□ 1.21
PCMTD1-207ENST00000522514 ADGRL1O94910 1474 aa22.63■■□□□ 1.21
PCMTD1-207ENST00000522514 DENND4BO75064 1496 aaPredicted RBP22.61■■□□□ 1.21
PCMTD1-207ENST00000522514 MTUS2Q5JR59 1369 aa22.61■■□□□ 1.21
PCMTD1-207ENST00000522514 ADRA2BP18089 450 aa22.6■■□□□ 1.21
PCMTD1-207ENST00000522514 POGZQ7Z3K3 1410 aa22.58■■□□□ 1.21
PCMTD1-207ENST00000522514 ABCC1P33527 1531 aa22.58■■□□□ 1.21
PCMTD1-207ENST00000522514 ZMYM4Q5VZL5 1548 aa22.58■■□□□ 1.21
PCMTD1-207ENST00000522514 ARHGEF40Q8TER5 1519 aa22.58■■□□□ 1.21
PCMTD1-207ENST00000522514 ITSN2Q9NZM3 1697 aa22.58■■□□□ 1.2
PCMTD1-207ENST00000522514 GPATCH8Q9UKJ3 1502 aaKnown RBP22.57■■□□□ 1.2
PCMTD1-207ENST00000522514 SAMD9LQ8IVG5 1584 aa22.57■■□□□ 1.2
PCMTD1-207ENST00000522514 SCAPERQ9BY12 1400 aa22.57■■□□□ 1.2
PCMTD1-207ENST00000522514 SUPT6HQ7KZ85 1726 aaKnown RBP22.55■■□□□ 1.2
PCMTD1-207ENST00000522514 ARHGEF12Q9NZN5 1544 aa22.55■■□□□ 1.2
PCMTD1-207ENST00000522514 SIGLEC1Q9BZZ2 1709 aa22.54■■□□□ 1.2
PCMTD1-207ENST00000522514 EFCAB2Q5VUJ9 269 aa22.53■■□□□ 1.2
PCMTD1-207ENST00000522514 LRRC9Q6ZRR7 1453 aa22.53■■□□□ 1.2
PCMTD1-207ENST00000522514 MAP3K1Q13233 1512 aa22.52■■□□□ 1.19
PCMTD1-207ENST00000522514 KDM5CP41229 1560 aa22.51■■□□□ 1.19
PCMTD1-207ENST00000522514 NCOA2Q15596 1464 aa22.51■■□□□ 1.19
PCMTD1-207ENST00000522514 YEATS2Q9ULM3 1422 aa22.5■■□□□ 1.19
PCMTD1-207ENST00000522514 KDM4FA0A1W2PPD8 638 aa22.5■■□□□ 1.19
PCMTD1-207ENST00000522514 ZFYVE16Q7Z3T8 1539 aa22.49■■□□□ 1.19
PCMTD1-207ENST00000522514 SYCP2Q9BX26 1530 aa22.49■■□□□ 1.19
PCMTD1-207ENST00000522514 CCNB3Q8WWL7 1395 aa22.48■■□□□ 1.19
PCMTD1-207ENST00000522514 TRAPPC8Q9Y2L5 1435 aa22.48■■□□□ 1.19
PCMTD1-207ENST00000522514 KANK4Q5T7N3 995 aaPredicted RBP22.47■■□□□ 1.19
PCMTD1-207ENST00000522514 ZNF518AQ6AHZ1 1483 aa22.46■■□□□ 1.19
PCMTD1-207ENST00000522514 HECW2Q9P2P5 1572 aa22.46■■□□□ 1.19
PCMTD1-207ENST00000522514 ABCA6Q8N139 1617 aa22.43■■□□□ 1.18
PCMTD1-207ENST00000522514 AFAP1Q8N556 730 aa22.42■■□□□ 1.18
PCMTD1-207ENST00000522514 MAGI2Q86UL8 1455 aa22.41■■□□□ 1.18
PCMTD1-207ENST00000522514 ZNF777Q9ULD5 760 aaPredicted RBP22.41■■□□□ 1.18
PCMTD1-207ENST00000522514 DIP2CQ9Y2E4 1556 aa22.41■■□□□ 1.18
PCMTD1-207ENST00000522514 KIDINS220Q9ULH0 1771 aa22.4■■□□□ 1.18
PCMTD1-207ENST00000522514 BCORL1Q5H9F3 1711 aa22.4■■□□□ 1.18
PCMTD1-207ENST00000522514 ZNF644Q9H582 1327 aaPredicted RBP22.39■■□□□ 1.18
PCMTD1-207ENST00000522514 CFDP1Q9UEE9 299 aaPredicted RBP22.39■■□□□ 1.17
PCMTD1-207ENST00000522514 ADAMTSL3P82987 1691 aa22.38■■□□□ 1.17
PCMTD1-207ENST00000522514 CAMSAP2Q08AD1 1489 aa22.36■■□□□ 1.17
PCMTD1-207ENST00000522514 INO80Q9ULG1 1556 aaPredicted RBP22.36■■□□□ 1.17
PCMTD1-207ENST00000522514 PLEKHH2Q8IVE3 1493 aa22.34■■□□□ 1.17
PCMTD1-207ENST00000522514 MLH3Q9UHC1 1453 aa22.34■■□□□ 1.17
PCMTD1-207ENST00000522514 KIAA1107Q9UPP5 1409 aa22.34■■□□□ 1.17
PCMTD1-207ENST00000522514 HNRNPMP52272 730 aaKnown RBP eCLIP22.34■■□□□ 1.173e-6■■■■■ 43.2
PCMTD1-207ENST00000522514 MADDQ8WXG6 1647 aa22.34■■□□□ 1.17
PCMTD1-207ENST00000522514 MBD5Q9P267 1494 aa22.34■■□□□ 1.17
PCMTD1-207ENST00000522514 ATP10AO60312 1499 aa22.32■■□□□ 1.16
PCMTD1-207ENST00000522514 C9orf84Q5VXU9 1444 aa22.31■■□□□ 1.16
PCMTD1-207ENST00000522514 ATP7AQ04656 1500 aa22.3■■□□□ 1.16
PCMTD1-207ENST00000522514 MYOM3Q5VTT5 1437 aa22.29■■□□□ 1.16
PCMTD1-207ENST00000522514 REREQ9P2R6 1566 aa22.29■■□□□ 1.16
PCMTD1-207ENST00000522514 RIMS1Q86UR5 1692 aaKnown RBP22.27■■□□□ 1.16
PCMTD1-207ENST00000522514 ARID4BQ4LE39 1312 aaPredicted RBP22.26■■□□□ 1.15
PCMTD1-207ENST00000522514 APLP2Q06481 763 aa22.25■■□□□ 1.15
PCMTD1-207ENST00000522514 FER1L4A9Z1Z3 1794 aa22.25■■□□□ 1.15
PCMTD1-207ENST00000522514 ARHGEF5Q12774 1597 aa22.25■■□□□ 1.15
PCMTD1-207ENST00000522514 ADGBQ8N7X0 1667 aa22.24■■□□□ 1.15
PCMTD1-207ENST00000522514 CCDC141Q6ZP82 1450 aa22.23■■□□□ 1.15
PCMTD1-207ENST00000522514 PLXNC1O60486 1568 aa22.22■■□□□ 1.15
PCMTD1-207ENST00000522514 PTPN23Q9H3S7 1636 aa22.22■■□□□ 1.15
PCMTD1-207ENST00000522514 MYT1LQ9UL68 1186 aa22.22■■□□□ 1.15
PCMTD1-207ENST00000522514 SPAG9O60271 1321 aaKnown RBP22.22■■□□□ 1.15
PCMTD1-207ENST00000522514 MIA2Q96PC5 1412 aa22.21■■□□□ 1.15
PCMTD1-207ENST00000522514 PTPRMP28827 1452 aa22.19■■□□□ 1.14
PCMTD1-207ENST00000522514 AGLP35573 1532 aa22.19■■□□□ 1.14
PCMTD1-207ENST00000522514 CROCC2H7BZ55 1655 aa22.19■■□□□ 1.14
PCMTD1-207ENST00000522514 MLECQ14165 292 aa22.18■■□□□ 1.14
PCMTD1-207ENST00000522514 FGD6Q6ZV73 1430 aa22.17■■□□□ 1.14
PCMTD1-207ENST00000522514 TCOF1Q13428 1488 aaKnown RBP22.15■■□□□ 1.14
PCMTD1-207ENST00000522514 MAST1Q9Y2H9 1570 aa22.14■■□□□ 1.13
PCMTD1-207ENST00000522514 A2MP01023 1474 aa22.14■■□□□ 1.13
PCMTD1-207ENST00000522514 DNMT1P26358 1616 aaKnown RBP22.12■■□□□ 1.13
PCMTD1-207ENST00000522514 RTEL1-TNFRSF6BF6WH68 1400 aa22.12■■□□□ 1.13
PCMTD1-207ENST00000522514 PPARGC1BQ86YN6 1023 aaKnown RBP22.1■■□□□ 1.13
PCMTD1-207ENST00000522514 ABCC5O15440 1437 aa22.07■■□□□ 1.12
PCMTD1-207ENST00000522514 C3P01024 1663 aa22.05■■□□□ 1.12
PCMTD1-207ENST00000522514 PIAS4Q8N2W9 510 aaPredicted RBP22.05■■□□□ 1.12
PCMTD1-207ENST00000522514 DAPK1P53355 1430 aa22.05■■□□□ 1.12
PCMTD1-207ENST00000522514 SHANK2Q9UPX8 1470 aa22.04■■□□□ 1.12
PCMTD1-207ENST00000522514 CLTCQ00610 1675 aaKnown RBP22.03■■□□□ 1.12
PCMTD1-207ENST00000522514 RSPH4AQ5TD94 716 aa22.02■■□□□ 1.12
PCMTD1-207ENST00000522514 DHX29Q7Z478 1369 aaKnown RBP22■■□□□ 1.11
PCMTD1-207ENST00000522514 MROH2AA6NES4 1674 aa21.99■■□□□ 1.11
PCMTD1-207ENST00000522514 TSPY4P0CV99 314 aa21.97■■□□□ 1.11
PCMTD1-207ENST00000522514 TSPY10P0CW01 314 aa21.97■■□□□ 1.11
PCMTD1-207ENST00000522514 RNF17Q9BXT8 1623 aaKnown RBP21.97■■□□□ 1.11
PCMTD1-207ENST00000522514 MROH1Q8NDA8 1641 aa21.96■■□□□ 1.11
PCMTD1-207ENST00000522514 EIF2AK4Q9P2K8 1649 aaKnown RBP21.96■■□□□ 1.11
PCMTD1-207ENST00000522514 CEBPAP49715 358 aaPredicted RBP21.96■■□□□ 1.11
PCMTD1-207ENST00000522514 LMTK3Q96Q04 1460 aa21.96■■□□□ 1.11
PCMTD1-207ENST00000522514 FAM50AQ14320 339 aaKnown RBP21.93■■□□□ 1.1
PCMTD1-207ENST00000522514 PTPRKQ15262 1439 aa21.93■■□□□ 1.1
PCMTD1-207ENST00000522514 DUOX2Q9NRD8 1548 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms