RNA–Protein interactions for RNA: ENST00000522344.1

CPEB4-210, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 2

Gene CPEB4, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-210ENST00000522344 PPP1R37O75864 691 aa11.66□□□□□ -0.54
CPEB4-210ENST00000522344 GTPBP6O43824 516 aaPredicted RBP11.64□□□□□ -0.55
CPEB4-210ENST00000522344 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.64□□□□□ -0.55
CPEB4-210ENST00000522344 MICALL2Q8IY33 904 aa11.63□□□□□ -0.55
CPEB4-210ENST00000522344 CFAP44Q96MT7 982 aa11.62□□□□□ -0.55
CPEB4-210ENST00000522344 PAXIP1Q6ZW49 1069 aaPredicted RBP11.61□□□□□ -0.55
CPEB4-210ENST00000522344 TMEM121BQ9BXQ6 578 aaPredicted RBP11.61□□□□□ -0.55
CPEB4-210ENST00000522344 SPRYD3Q8NCJ5 442 aa11.6□□□□□ -0.55
CPEB4-210ENST00000522344 SNPHO15079 494 aa11.48□□□□□ -0.57
CPEB4-210ENST00000522344 TMEM92Q6UXU6 159 aa11.48□□□□□ -0.57
CPEB4-210ENST00000522344 MARVELD3Q96A59 401 aa11.46□□□□□ -0.57
CPEB4-210ENST00000522344 TMC2Q8TDI7 906 aa11.45□□□□□ -0.58
CPEB4-210ENST00000522344 C2orf72A6NCS6 295 aa11.43□□□□□ -0.58
CPEB4-210ENST00000522344 PLCB2Q00722 1185 aa11.39□□□□□ -0.59
CPEB4-210ENST00000522344 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
CPEB4-210ENST00000522344 KIF3CO14782 793 aa11.37□□□□□ -0.59
CPEB4-210ENST00000522344 PDE4AP27815 886 aa11.37□□□□□ -0.59
CPEB4-210ENST00000522344 KRTAP3-3Q9BYR6 98 aa11.37□□□□□ -0.59
CPEB4-210ENST00000522344 KRTAP3-2Q9BYR7 98 aa11.37□□□□□ -0.59
CPEB4-210ENST00000522344 GPHNQ9NQX3 736 aaPredicted RBP11.36□□□□□ -0.59
CPEB4-210ENST00000522344 NCKAP5LQ9HCH0 1330 aa11.35□□□□□ -0.59
CPEB4-210ENST00000522344 LARP6Q9BRS8 491 aaKnown RBP11.34□□□□□ -0.59
CPEB4-210ENST00000522344 CRISPLD2Q9H0B8 497 aa11.33□□□□□ -0.6
CPEB4-210ENST00000522344 TSHZ2Q9NRE2 1034 aa11.33□□□□□ -0.6
CPEB4-210ENST00000522344 EMP3P54852 163 aa11.32□□□□□ -0.6
CPEB4-210ENST00000522344 DSG2Q14126 1118 aa11.32□□□□□ -0.6
CPEB4-210ENST00000522344 POTEB3A0JP26 581 aa11.31□□□□□ -0.6
CPEB4-210ENST00000522344 DOK7Q18PE1 504 aa11.31□□□□□ -0.6
CPEB4-210ENST00000522344 POTEBQ6S5H4 581 aa11.31□□□□□ -0.6
CPEB4-210ENST00000522344 PLPP6Q8IY26 295 aa11.31□□□□□ -0.6
CPEB4-210ENST00000522344 ZNF710Q8N1W2 664 aa11.31□□□□□ -0.6
CPEB4-210ENST00000522344 HAP1P54257 671 aaPredicted RBP11.3□□□□□ -0.6
CPEB4-210ENST00000522344 FOXK1P85037 733 aa11.3□□□□□ -0.6
CPEB4-210ENST00000522344 HOXB3P14651 431 aaPredicted RBP11.29□□□□□ -0.6
CPEB4-210ENST00000522344 PPP1R15BQ5SWA1 713 aa11.29□□□□□ -0.6
CPEB4-210ENST00000522344 DDX27Q96GQ7 796 aaKnown RBP11.29□□□□□ -0.6
CPEB4-210ENST00000522344 HS3ST6Q96QI5 342 aa11.29□□□□□ -0.6
CPEB4-210ENST00000522344 RIMBP2O15034 1052 aa11.27□□□□□ -0.61
CPEB4-210ENST00000522344 FAM205CA6NFA0 338 aa11.23□□□□□ -0.61
CPEB4-210ENST00000522344 WDR70Q9NW82 654 aa11.23□□□□□ -0.61
CPEB4-210ENST00000522344 MFSD10Q14728 455 aa11.22□□□□□ -0.61
CPEB4-210ENST00000522344 UPF1Q92900 1129 aaKnown RBP eCLIP11.2□□□□□ -0.62
CPEB4-210ENST00000522344 ARSIQ5FYB1 569 aa11.19□□□□□ -0.62
CPEB4-210ENST00000522344 KHSRPQ92945 711 aaKnown RBP eCLIP11.18□□□□□ -0.62
CPEB4-210ENST00000522344 SLC34A2O95436 690 aa11.17□□□□□ -0.62
CPEB4-210ENST00000522344 ZSWIM6Q9HCJ5 1215 aa11.17□□□□□ -0.62
CPEB4-210ENST00000522344 PCDHGA4Q9Y5G9 962 aa11.17□□□□□ -0.62
CPEB4-210ENST00000522344 HOXB1P14653 301 aaPredicted RBP11.16□□□□□ -0.62
CPEB4-210ENST00000522344 GPR153Q6NV75 609 aa11.16□□□□□ -0.62
CPEB4-210ENST00000522344 TBC1D12O60347 775 aa11.14□□□□□ -0.63
CPEB4-210ENST00000522344 PTCD2Q8WV60 388 aaKnown RBP11.14□□□□□ -0.63
CPEB4-210ENST00000522344 NUDT7P0C024 238 aa11.13□□□□□ -0.63
CPEB4-210ENST00000522344 MAP3K9P80192 1104 aa11.11□□□□□ -0.63
CPEB4-210ENST00000522344 E2F4Q16254 413 aa11.11□□□□□ -0.63
CPEB4-210ENST00000522344 OXER1Q8TDS5 423 aa11.11□□□□□ -0.63
CPEB4-210ENST00000522344 EMILIN3Q9NT22 766 aa11.11□□□□□ -0.63
CPEB4-210ENST00000522344 ERBB3P21860 1342 aa11.09□□□□□ -0.63
CPEB4-210ENST00000522344 CAMK2BQ13554 666 aa11.08□□□□□ -0.64
CPEB4-210ENST00000522344 RNF166Q96A37 237 aaPredicted RBP11.07□□□□□ -0.64
CPEB4-210ENST00000522344 DPYSL4O14531 572 aa11.06□□□□□ -0.64
CPEB4-210ENST00000522344 VARS2Q5ST30 1063 aaKnown RBP11.04□□□□□ -0.64
CPEB4-210ENST00000522344 LHX6Q9UPM6 363 aa11.04□□□□□ -0.64
CPEB4-210ENST00000522344 KDM2AQ9Y2K7 1162 aa11.04□□□□□ -0.64
CPEB4-210ENST00000522344 ZNF316A6NFI3 1004 aaPredicted RBP11.03□□□□□ -0.64
CPEB4-210ENST00000522344 EVI5O60447 810 aa11.03□□□□□ -0.64
CPEB4-210ENST00000522344 VSIG10Q8N0Z9 540 aa11.03□□□□□ -0.64
CPEB4-210ENST00000522344 KCNV2Q8TDN2 545 aa10.99□□□□□ -0.65
CPEB4-210ENST00000522344 KDM4FA0A1W2PPD8 638 aa10.98□□□□□ -0.65
CPEB4-210ENST00000522344 MYT1LQ9UL68 1186 aa10.97□□□□□ -0.65
CPEB4-210ENST00000522344 P3H3Q8IVL6 736 aa10.96□□□□□ -0.65
CPEB4-210ENST00000522344 ZNF454Q8N9F8 522 aa10.94□□□□□ -0.66
CPEB4-210ENST00000522344 ARHGEF1Q92888 912 aaKnown RBP10.93□□□□□ -0.66
CPEB4-210ENST00000522344 ANO8Q9HCE9 1232 aaPredicted RBP10.93□□□□□ -0.66
CPEB4-210ENST00000522344 PSDA5PKW4 1024 aaPredicted RBP10.92□□□□□ -0.66
CPEB4-210ENST00000522344 PDIA6Q15084 440 aa10.92□□□□□ -0.66
CPEB4-210ENST00000522344 SPDYE16A6NNV3 312 aaPredicted RBP10.91□□□□□ -0.66
CPEB4-210ENST00000522344 PPP4R3BQ5MIZ7 849 aa10.91□□□□□ -0.66
CPEB4-210ENST00000522344 DDX12PQ92771 950 aa10.91□□□□□ -0.66
CPEB4-210ENST00000522344 ARIH1Q9Y4X5 557 aaPredicted RBP10.91□□□□□ -0.66
CPEB4-210ENST00000522344 ZNF687Q8N1G0 1237 aa10.9□□□□□ -0.66
CPEB4-210ENST00000522344 FOSBP53539 338 aa10.88□□□□□ -0.67
CPEB4-210ENST00000522344 JPH4Q96JJ6 628 aa10.88□□□□□ -0.67
CPEB4-210ENST00000522344 GRXCR2A6NFK2 248 aa10.87□□□□□ -0.67
CPEB4-210ENST00000522344 AXIN2Q9Y2T1 843 aa10.86□□□□□ -0.67
CPEB4-210ENST00000522344 SLC24A1O60721 1099 aa10.85□□□□□ -0.67
CPEB4-210ENST00000522344 PTGER2P43116 358 aa10.85□□□□□ -0.67
CPEB4-210ENST00000522344 PCDHGA10Q9Y5H3 936 aa10.85□□□□□ -0.67
CPEB4-210ENST00000522344 PHF14O94880 888 aa10.84□□□□□ -0.67
CPEB4-210ENST00000522344 NBR1Q14596 966 aa10.84□□□□□ -0.67
CPEB4-210ENST00000522344 ZDHHC16Q969W1 377 aa10.84□□□□□ -0.67
CPEB4-210ENST00000522344 TYW1BQ6NUM6 668 aa10.82□□□□□ -0.68
CPEB4-210ENST00000522344 RBM33Q96EV2 1170 aaKnown RBP10.82□□□□□ -0.68
CPEB4-210ENST00000522344 POTEEQ6S8J3 1075 aa10.81□□□□□ -0.68
CPEB4-210ENST00000522344 KCNH8Q96L42 1107 aa10.81□□□□□ -0.68
CPEB4-210ENST00000522344 KCNK17Q96T54 332 aa10.81□□□□□ -0.68
CPEB4-210ENST00000522344 EPAS1Q99814 870 aa10.81□□□□□ -0.68
CPEB4-210ENST00000522344 ADAM33Q9BZ11 813 aa10.81□□□□□ -0.68
CPEB4-210ENST00000522344 ARHGAP33O14559 1287 aa10.8□□□□□ -0.68
CPEB4-210ENST00000522344 SEMA3EO15041 775 aa10.8□□□□□ -0.68
CPEB4-210ENST00000522344 PBX2P40425 430 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms