RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 LMTK3Q96Q04 1460 aa6.83□□□□□ -1.32
PVT1-211ENST00000521600 RIOK3O14730 519 aaKnown RBP6.82□□□□□ -1.32
PVT1-211ENST00000521600 HS6ST3Q8IZP7 471 aa6.82□□□□□ -1.32
PVT1-211ENST00000521600 SPRYD3Q8NCJ5 442 aa6.82□□□□□ -1.32
PVT1-211ENST00000521600 ABCA10Q8WWZ4 1543 aa6.81□□□□□ -1.32
PVT1-211ENST00000521600 VSIG10Q8N0Z9 540 aa6.81□□□□□ -1.32
PVT1-211ENST00000521600 PRG4Q92954 1404 aaPredicted RBP6.81□□□□□ -1.32
PVT1-211ENST00000521600 PYGBP11216 843 aa6.8□□□□□ -1.32
PVT1-211ENST00000521600 ILDR2Q71H61 639 aa6.8□□□□□ -1.32
PVT1-211ENST00000521600 COL17A1Q9UMD9 1497 aaPredicted RBP6.79□□□□□ -1.32
PVT1-211ENST00000521600 TAOK2Q9UL54 1235 aa6.79□□□□□ -1.32
PVT1-211ENST00000521600 RUSC2Q8N2Y8 1516 aa6.79□□□□□ -1.32
PVT1-211ENST00000521600 CHRM1P11229 460 aaPredicted RBP6.78□□□□□ -1.32
PVT1-211ENST00000521600 PRKAR2AP13861 404 aaKnown RBP6.78□□□□□ -1.32
PVT1-211ENST00000521600 FARP1Q9Y4F1 1045 aaPredicted RBP6.78□□□□□ -1.32
PVT1-211ENST00000521600 VGFO15240 615 aaPredicted RBP6.77□□□□□ -1.33
PVT1-211ENST00000521600 TSPYL2Q9H2G4 693 aaPredicted RBP6.77□□□□□ -1.33
PVT1-211ENST00000521600 STK25O00506 426 aa6.76□□□□□ -1.33
PVT1-211ENST00000521600 TSHZ2Q9NRE2 1034 aa6.76□□□□□ -1.33
PVT1-211ENST00000521600 KDM2AQ9Y2K7 1162 aa6.76□□□□□ -1.33
PVT1-211ENST00000521600 CUL7Q14999 1698 aa6.75□□□□□ -1.33
PVT1-211ENST00000521600 SOCS7O14512 581 aa6.75□□□□□ -1.33
PVT1-211ENST00000521600 MAP3K4Q9Y6R4 1608 aa6.75□□□□□ -1.33
PVT1-211ENST00000521600 FHAD1B1AJZ9 1412 aa6.75□□□□□ -1.33
PVT1-211ENST00000521600 GLI2P10070 1586 aa6.74□□□□□ -1.33
PVT1-211ENST00000521600 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.74□□□□□ -1.33
PVT1-211ENST00000521600 ZFP91Q96JP5 570 aaPredicted RBP6.74□□□□□ -1.33
PVT1-211ENST00000521600 KIF21BO75037 1637 aa6.74□□□□□ -1.33
PVT1-211ENST00000521600 TOP2BQ02880 1626 aa6.74□□□□□ -1.33
PVT1-211ENST00000521600 FXR2P51116 673 aaKnown RBP eCLIP6.73□□□□□ -1.33
PVT1-211ENST00000521600 NKX1-1Q15270 411 aaPredicted RBP6.73□□□□□ -1.33
PVT1-211ENST00000521600 JPH4Q96JJ6 628 aa6.73□□□□□ -1.33
PVT1-211ENST00000521600 STK24Q9Y6E0 443 aa6.73□□□□□ -1.33
PVT1-211ENST00000521600 ERICH3Q5RHP9 1530 aa6.72□□□□□ -1.33
PVT1-211ENST00000521600 SGIP1Q9BQI5 828 aa6.72□□□□□ -1.33
PVT1-211ENST00000521600 BCL11BQ9C0K0 894 aaPredicted RBP6.72□□□□□ -1.33
PVT1-211ENST00000521600 CHRDL2Q6WN34 429 aa6.71□□□□□ -1.34
PVT1-211ENST00000521600 BIVM-ERCC5R4GMW8 1640 aa6.7□□□□□ -1.34
PVT1-211ENST00000521600 SUPT5HO00267 1087 aaKnown RBP6.7□□□□□ -1.34
PVT1-211ENST00000521600 BCANQ96GW7 911 aa6.7□□□□□ -1.34
PVT1-211ENST00000521600 ABCC2Q92887 1545 aa6.7□□□□□ -1.34
PVT1-211ENST00000521600 DISP3Q9P2K9 1392 aa6.69□□□□□ -1.34
PVT1-211ENST00000521600 ASXL2Q76L83 1435 aa6.69□□□□□ -1.34
PVT1-211ENST00000521600 GTPBP6O43824 516 aaPredicted RBP6.69□□□□□ -1.34
PVT1-211ENST00000521600 PIP4P2Q8N4L2 257 aa6.69□□□□□ -1.34
PVT1-211ENST00000521600 SPATA31D1Q6ZQQ2 1576 aa6.69□□□□□ -1.34
PVT1-211ENST00000521600 ADAMTSL3P82987 1691 aa6.68□□□□□ -1.34
PVT1-211ENST00000521600 ZNF467Q7Z7K2 595 aaPredicted RBP6.68□□□□□ -1.34
PVT1-211ENST00000521600 CCDC61Q9Y6R9 512 aa6.68□□□□□ -1.34
PVT1-211ENST00000521600 PCF11O94913 1555 aaKnown RBP6.67□□□□□ -1.34
PVT1-211ENST00000521600 PAK3O75914 559 aaPredicted RBP6.67□□□□□ -1.34
PVT1-211ENST00000521600 PCDHB8Q9UN66 801 aa6.67□□□□□ -1.34
PVT1-211ENST00000521600 PCDHB13Q9Y5F0 798 aa6.67□□□□□ -1.34
PVT1-211ENST00000521600 EPRSP07814 1512 aaKnown RBP6.66□□□□□ -1.34
PVT1-211ENST00000521600 WRNQ14191 1432 aaPredicted RBP eCLIP6.66□□□□□ -1.34
PVT1-211ENST00000521600 PLB1Q6P1J6 1458 aa6.66□□□□□ -1.34
PVT1-211ENST00000521600 ZCCHC11Q5TAX3 1644 aaKnown RBP6.65□□□□□ -1.34
PVT1-211ENST00000521600 PTPRMP28827 1452 aa6.65□□□□□ -1.35
PVT1-211ENST00000521600 TEX14Q8IWB6 1497 aa6.65□□□□□ -1.35
PVT1-211ENST00000521600 PDAP1Q13442 181 aaKnown RBP6.64□□□□□ -1.35
PVT1-211ENST00000521600 MADDQ8WXG6 1647 aa6.64□□□□□ -1.35
PVT1-211ENST00000521600 BCORL1Q5H9F3 1711 aa6.63□□□□□ -1.35
PVT1-211ENST00000521600 KIAA0586Q9BVV6 1533 aa6.63□□□□□ -1.35
PVT1-211ENST00000521600 PTPRGP23470 1445 aa6.62□□□□□ -1.35
PVT1-211ENST00000521600 ZNF579Q8NAF0 562 aaKnown RBP6.62□□□□□ -1.35
PVT1-211ENST00000521600 RYDENQ9NUL5 291 aaKnown RBP6.62□□□□□ -1.35
PVT1-211ENST00000521600 RIMS1Q86UR5 1692 aaKnown RBP6.61□□□□□ -1.35
PVT1-211ENST00000521600 CFAP43Q8NDM7 1665 aa6.61□□□□□ -1.35
PVT1-211ENST00000521600 UHRF1BP1LA0JNW5 1464 aa6.61□□□□□ -1.35
PVT1-211ENST00000521600 TTBK1Q5TCY1 1321 aaPredicted RBP6.61□□□□□ -1.35
PVT1-211ENST00000521600 MAP3K13O43283 966 aa6.61□□□□□ -1.35
PVT1-211ENST00000521600 PSEN1P49768 467 aa6.61□□□□□ -1.35
PVT1-211ENST00000521600 IFNL1Q8IU54 200 aa6.61□□□□□ -1.35
PVT1-211ENST00000521600 KDM5BQ9UGL1 1544 aa6.6□□□□□ -1.35
PVT1-211ENST00000521600 CERKQ8TCT0 537 aa6.6□□□□□ -1.35
PVT1-211ENST00000521600 KIF12Q96FN5 646 aa6.6□□□□□ -1.35
PVT1-211ENST00000521600 ZRANB1Q9UGI0 708 aa6.6□□□□□ -1.35
PVT1-211ENST00000521600 CD44P16070 742 aaKnown RBP6.59□□□□□ -1.35
PVT1-211ENST00000521600 HSPA2P54652 639 aa6.58□□□□□ -1.36
PVT1-211ENST00000521600 MAGI3Q5TCQ9 1506 aa6.58□□□□□ -1.36
PVT1-211ENST00000521600 TNIKQ9UKE5 1360 aa6.57□□□□□ -1.36
PVT1-211ENST00000521600 STRCQ7RTU9 1775 aa6.57□□□□□ -1.36
PVT1-211ENST00000521600 SIGLEC1Q9BZZ2 1709 aa6.57□□□□□ -1.36
PVT1-211ENST00000521600 PHF12Q96QT6 1004 aa6.57□□□□□ -1.36
PVT1-211ENST00000521600 UACAQ9BZF9 1416 aa6.57□□□□□ -1.36
PVT1-211ENST00000521600 DISP1Q96F81 1524 aa6.56□□□□□ -1.36
PVT1-211ENST00000521600 WDR7Q9Y4E6 1490 aa6.56□□□□□ -1.36
PVT1-211ENST00000521600 CABP2Q9NPB3 220 aa6.56□□□□□ -1.36
PVT1-211ENST00000521600 PRKCSHP14314 528 aaPredicted RBP6.55□□□□□ -1.36
PVT1-211ENST00000521600 MFRPQ9BY79 579 aa6.55□□□□□ -1.36
PVT1-211ENST00000521600 IQGAP2Q13576 1575 aa6.55□□□□□ -1.36
PVT1-211ENST00000521600 FRMPD1Q5SYB0 1578 aa6.55□□□□□ -1.36
PVT1-211ENST00000521600 CD109Q6YHK3 1445 aa6.54□□□□□ -1.36
PVT1-211ENST00000521600 NBR1Q14596 966 aa6.54□□□□□ -1.36
PVT1-211ENST00000521600 EFCAB3Q8N7B9 438 aa6.54□□□□□ -1.36
PVT1-211ENST00000521600 ARAP3Q8WWN8 1544 aa6.54□□□□□ -1.36
PVT1-211ENST00000521600 CARMIL2Q6F5E8 1435 aa6.53□□□□□ -1.36
PVT1-211ENST00000521600 KIAA0556O60303 1618 aa6.52□□□□□ -1.37
PVT1-211ENST00000521600 CADPS2Q86UW7 1296 aa6.52□□□□□ -1.37
PVT1-211ENST00000521600 IGF1RP08069 1367 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms