RNA–Protein interactions for RNA: ENST00000521588.3

R3HCC1-207, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 2

Gene R3HCC1, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-207ENST00000521588 MAGI2Q86UL8 1455 aa31.15■■■□□ 2.58
R3HCC1-207ENST00000521588 ARHGAP5Q13017 1502 aa31.14■■■□□ 2.57
R3HCC1-207ENST00000521588 ADAMTSL3P82987 1691 aa31.13■■■□□ 2.57
R3HCC1-207ENST00000521588 CEP162Q5TB80 1403 aa31.12■■■□□ 2.57
R3HCC1-207ENST00000521588 YEATS2Q9ULM3 1422 aa31.12■■■□□ 2.57
R3HCC1-207ENST00000521588 CDC42BPBQ9Y5S2 1711 aa31.1■■■□□ 2.57
R3HCC1-207ENST00000521588 ZFYVE16Q7Z3T8 1539 aa31.1■■■□□ 2.57
R3HCC1-207ENST00000521588 ARID4BQ4LE39 1312 aaPredicted RBP31.1■■■□□ 2.57
R3HCC1-207ENST00000521588 BCORL1Q5H9F3 1711 aa31.08■■■□□ 2.57
R3HCC1-207ENST00000521588 PREX2Q70Z35 1606 aa31.06■■■□□ 2.56
R3HCC1-207ENST00000521588 LOC105371045A0A1W2PR82 267 aa31.04■■■□□ 2.56
R3HCC1-207ENST00000521588 AFAP1Q8N556 730 aa31.03■■■□□ 2.56
R3HCC1-207ENST00000521588 ZNF518AQ6AHZ1 1483 aa31.02■■■□□ 2.56
R3HCC1-207ENST00000521588 PTPRMP28827 1452 aa31.01■■■□□ 2.56
R3HCC1-207ENST00000521588 CDC42BPAQ5VT25 1732 aa31.01■■■□□ 2.55
R3HCC1-207ENST00000521588 SIGLEC1Q9BZZ2 1709 aa30.99■■■□□ 2.55
R3HCC1-207ENST00000521588 KDM5CP41229 1560 aa30.99■■■□□ 2.55
R3HCC1-207ENST00000521588 ATP10AO60312 1499 aa30.98■■■□□ 2.55
R3HCC1-207ENST00000521588 ARHGEF12Q9NZN5 1544 aa30.98■■■□□ 2.55
R3HCC1-207ENST00000521588 MADDQ8WXG6 1647 aa30.97■■■□□ 2.55
R3HCC1-207ENST00000521588 GPATCH8Q9UKJ3 1502 aaKnown RBP30.97■■■□□ 2.55
R3HCC1-207ENST00000521588 ABCC1P33527 1531 aa30.95■■■□□ 2.55
R3HCC1-207ENST00000521588 HECW2Q9P2P5 1572 aa30.95■■■□□ 2.54
R3HCC1-207ENST00000521588 MTUS2Q5JR59 1369 aa30.93■■■□□ 2.54
R3HCC1-207ENST00000521588 TRAPPC8Q9Y2L5 1435 aa30.93■■■□□ 2.54
R3HCC1-207ENST00000521588 C9orf84Q5VXU9 1444 aa30.91■■■□□ 2.54
R3HCC1-207ENST00000521588 MLH3Q9UHC1 1453 aa30.91■■■□□ 2.54
R3HCC1-207ENST00000521588 ITSN2Q9NZM3 1697 aa30.89■■■□□ 2.54
R3HCC1-207ENST00000521588 ZNF777Q9ULD5 760 aaPredicted RBP30.87■■■□□ 2.53
R3HCC1-207ENST00000521588 CCNB3Q8WWL7 1395 aa30.87■■■□□ 2.53
R3HCC1-207ENST00000521588 SAMD9LQ8IVG5 1584 aa30.86■■■□□ 2.53
R3HCC1-207ENST00000521588 RIMS1Q86UR5 1692 aaKnown RBP30.85■■■□□ 2.53
R3HCC1-207ENST00000521588 MLECQ14165 292 aa30.85■■■□□ 2.53
R3HCC1-207ENST00000521588 CFDP1Q9UEE9 299 aaPredicted RBP30.85■■■□□ 2.53
R3HCC1-207ENST00000521588 MYT1LQ9UL68 1186 aa30.84■■■□□ 2.53
R3HCC1-207ENST00000521588 DIP2CQ9Y2E4 1556 aa30.83■■■□□ 2.53
R3HCC1-207ENST00000521588 EHBP1L1Q8N3D4 1523 aa30.83■■■□□ 2.53
R3HCC1-207ENST00000521588 KIAA1107Q9UPP5 1409 aa30.81■■■□□ 2.52
R3HCC1-207ENST00000521588 REREQ9P2R6 1566 aa30.8■■■□□ 2.52
R3HCC1-207ENST00000521588 HNRNPMP52272 730 aaKnown RBP eCLIP30.8■■■□□ 2.52
R3HCC1-207ENST00000521588 ABCA6Q8N139 1617 aa30.8■■■□□ 2.52
R3HCC1-207ENST00000521588 VPS8Q8N3P4 1428 aa30.79■■■□□ 2.52
R3HCC1-207ENST00000521588 SYCP2Q9BX26 1530 aa30.78■■■□□ 2.52
R3HCC1-207ENST00000521588 PLEKHH2Q8IVE3 1493 aa30.77■■■□□ 2.52
R3HCC1-207ENST00000521588 KIDINS220Q9ULH0 1771 aa30.77■■■□□ 2.52
R3HCC1-207ENST00000521588 TIAM1Q13009 1591 aa30.76■■■□□ 2.52
R3HCC1-207ENST00000521588 FER1L4A9Z1Z3 1794 aa30.74■■■□□ 2.51
R3HCC1-207ENST00000521588 AGLP35573 1532 aa30.72■■■□□ 2.51
R3HCC1-207ENST00000521588 SPAG9O60271 1321 aaKnown RBP30.71■■■□□ 2.51
R3HCC1-207ENST00000521588 ZNF644Q9H582 1327 aaPredicted RBP30.71■■■□□ 2.51
R3HCC1-207ENST00000521588 NCOA2Q15596 1464 aa30.69■■■□□ 2.5
R3HCC1-207ENST00000521588 LMTK3Q96Q04 1460 aa30.67■■■□□ 2.5
R3HCC1-207ENST00000521588 PLPPR3Q6T4P5 718 aa30.66■■■□□ 2.5
R3HCC1-207ENST00000521588 SUPT6HQ7KZ85 1726 aaKnown RBP30.66■■■□□ 2.5
R3HCC1-207ENST00000521588 MBD5Q9P267 1494 aa30.64■■■□□ 2.5
R3HCC1-207ENST00000521588 LRRC9Q6ZRR7 1453 aa30.63■■■□□ 2.49
R3HCC1-207ENST00000521588 ATP7AQ04656 1500 aa30.62■■■□□ 2.49
R3HCC1-207ENST00000521588 MAP3K1Q13233 1512 aa30.62■■■□□ 2.49
R3HCC1-207ENST00000521588 INO80Q9ULG1 1556 aaPredicted RBP30.61■■■□□ 2.49
R3HCC1-207ENST00000521588 CEBPAP49715 358 aaPredicted RBP30.6■■■□□ 2.49
R3HCC1-207ENST00000521588 KANK4Q5T7N3 995 aaPredicted RBP30.57■■■□□ 2.48
R3HCC1-207ENST00000521588 A2MP01023 1474 aa30.52■■■□□ 2.48
R3HCC1-207ENST00000521588 RTEL1-TNFRSF6BF6WH68 1400 aa30.52■■■□□ 2.48
R3HCC1-207ENST00000521588 CAMSAP2Q08AD1 1489 aa30.51■■■□□ 2.48
R3HCC1-207ENST00000521588 PLXNC1O60486 1568 aa30.51■■■□□ 2.47
R3HCC1-207ENST00000521588 HSPA2P54652 639 aa30.51■■■□□ 2.47
R3HCC1-207ENST00000521588 RSPH4AQ5TD94 716 aa30.51■■■□□ 2.47
R3HCC1-207ENST00000521588 ESF1Q9H501 851 aaKnown RBP30.5■■■□□ 2.47
R3HCC1-207ENST00000521588 CNTLNQ9NXG0 1405 aa30.47■■■□□ 2.47
R3HCC1-207ENST00000521588 SETD1BQ9UPS6 1966 aaKnown RBP30.47■■■□□ 2.47
R3HCC1-207ENST00000521588 CCDC141Q6ZP82 1450 aa30.46■■■□□ 2.47
R3HCC1-207ENST00000521588 C3P01024 1663 aa30.46■■■□□ 2.47
R3HCC1-207ENST00000521588 ADGBQ8N7X0 1667 aa30.45■■■□□ 2.46
R3HCC1-207ENST00000521588 PREX1Q8TCU6 1659 aa30.44■■■□□ 2.46
R3HCC1-207ENST00000521588 DHX29Q7Z478 1369 aaKnown RBP30.41■■■□□ 2.46
R3HCC1-207ENST00000521588 ARHGEF5Q12774 1597 aa30.41■■■□□ 2.46
R3HCC1-207ENST00000521588 MYOM3Q5VTT5 1437 aa30.39■■■□□ 2.45
R3HCC1-207ENST00000521588 MIA2Q96PC5 1412 aa30.39■■■□□ 2.45
R3HCC1-207ENST00000521588 APLP2Q06481 763 aa30.38■■■□□ 2.45
R3HCC1-207ENST00000521588 GGT6Q6P531 493 aa30.37■■■□□ 2.45
R3HCC1-207ENST00000521588 PPP6R1Q9UPN7 881 aa30.37■■■□□ 2.45
R3HCC1-207ENST00000521588 ZMYM3Q14202 1370 aa30.37■■■□□ 2.45
R3HCC1-207ENST00000521588 MROH2AA6NES4 1674 aa30.36■■■□□ 2.45
R3HCC1-207ENST00000521588 TSPY4P0CV99 314 aa30.36■■■□□ 2.45
R3HCC1-207ENST00000521588 TSPY10P0CW01 314 aa30.36■■■□□ 2.45
R3HCC1-207ENST00000521588 ILDR1Q86SU0 546 aaPredicted RBP30.36■■■□□ 2.45
R3HCC1-207ENST00000521588 UHRF1BP1Q6BDS2 1440 aa30.36■■■□□ 2.45
R3HCC1-207ENST00000521588 NPATQ14207 1427 aa30.3■■■□□ 2.44
R3HCC1-207ENST00000521588 CLTCQ00610 1675 aaKnown RBP30.3■■■□□ 2.44
R3HCC1-207ENST00000521588 KIF3BO15066 747 aa30.27■■■□□ 2.44
R3HCC1-207ENST00000521588 MAST1Q9Y2H9 1570 aa30.27■■■□□ 2.44
R3HCC1-207ENST00000521588 PTPRKQ15262 1439 aa30.22■■■□□ 2.43
R3HCC1-207ENST00000521588 STRCQ7RTU9 1775 aa30.2■■■□□ 2.43
R3HCC1-207ENST00000521588 PTPN23Q9H3S7 1636 aa30.16■■■□□ 2.42
R3HCC1-207ENST00000521588 DMRT2Q9Y5R5 561 aa30.16■■■□□ 2.42
R3HCC1-207ENST00000521588 FAM135AQ9P2D6 1515 aa30.16■■■□□ 2.42
R3HCC1-207ENST00000521588 FGD6Q6ZV73 1430 aa30.15■■■□□ 2.42
R3HCC1-207ENST00000521588 ABCC5O15440 1437 aa30.14■■■□□ 2.42
R3HCC1-207ENST00000521588 TCOF1Q13428 1488 aaKnown RBP30.12■■■□□ 2.41
R3HCC1-207ENST00000521588 WASHC2CQ9Y4E1 1318 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms