RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 LRRIQ1Q96JM4 1722 aa16.79■□□□□ 0.28
TRAPPC9-209ENST00000521167 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.77■□□□□ 0.28
TRAPPC9-209ENST00000521167 CCDC18Q5T9S5 1454 aa16.75■□□□□ 0.27
TRAPPC9-209ENST00000521167 PCF11O94913 1555 aaKnown RBP16.74■□□□□ 0.27
TRAPPC9-209ENST00000521167 SLC4A2P04920 1241 aa16.74■□□□□ 0.27
TRAPPC9-209ENST00000521167 FYCO1Q9BQS8 1478 aa16.73■□□□□ 0.27
TRAPPC9-209ENST00000521167 TROQ12816 1431 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC9-209ENST00000521167 TTC37Q6PGP7 1564 aa16.72■□□□□ 0.27
TRAPPC9-209ENST00000521167 CFAP74Q9C0B2 1584 aa16.72■□□□□ 0.27
TRAPPC9-209ENST00000521167 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC9-209ENST00000521167 PLCH2O75038 1416 aa16.7■□□□□ 0.26
TRAPPC9-209ENST00000521167 FANCAO15360 1455 aa16.7■□□□□ 0.26
TRAPPC9-209ENST00000521167 MYO5CQ9NQX4 1742 aa16.7■□□□□ 0.26
TRAPPC9-209ENST00000521167 CEP162Q5TB80 1403 aa16.7■□□□□ 0.26
TRAPPC9-209ENST00000521167 AKNAQ7Z591 1439 aa16.7■□□□□ 0.26
TRAPPC9-209ENST00000521167 KIF14Q15058 1648 aa16.69■□□□□ 0.26
TRAPPC9-209ENST00000521167 LOC105371045A0A1W2PR82 267 aa16.68■□□□□ 0.26
TRAPPC9-209ENST00000521167 KDM4FA0A1W2PPD8 638 aa16.67■□□□□ 0.26
TRAPPC9-209ENST00000521167 RAPGEF3O95398 923 aa16.67■□□□□ 0.26
TRAPPC9-209ENST00000521167 EFCAB2Q5VUJ9 269 aa16.66■□□□□ 0.26
TRAPPC9-209ENST00000521167 DENND4BO75064 1496 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC9-209ENST00000521167 RICTORQ6R327 1708 aa16.64■□□□□ 0.25
TRAPPC9-209ENST00000521167 FRMPD1Q5SYB0 1578 aa16.62■□□□□ 0.25
TRAPPC9-209ENST00000521167 CDC42BPBQ9Y5S2 1711 aa16.61■□□□□ 0.25
TRAPPC9-209ENST00000521167 ADGRL1O94910 1474 aa16.61■□□□□ 0.25
TRAPPC9-209ENST00000521167 SCAPERQ9BY12 1400 aa16.6■□□□□ 0.25
TRAPPC9-209ENST00000521167 ARHGAP5Q13017 1502 aa16.59■□□□□ 0.25
TRAPPC9-209ENST00000521167 CDC42BPAQ5VT25 1732 aa16.57■□□□□ 0.24
TRAPPC9-209ENST00000521167 PREX2Q70Z35 1606 aa16.57■□□□□ 0.24
TRAPPC9-209ENST00000521167 ZMYM4Q5VZL5 1548 aa16.56■□□□□ 0.24
TRAPPC9-209ENST00000521167 MAGI2Q86UL8 1455 aa16.56■□□□□ 0.24
TRAPPC9-209ENST00000521167 MTUS2Q5JR59 1369 aa16.55■□□□□ 0.24
TRAPPC9-209ENST00000521167 POGZQ7Z3K3 1410 aa16.54■□□□□ 0.24
TRAPPC9-209ENST00000521167 VPS8Q8N3P4 1428 aa16.53■□□□□ 0.24
TRAPPC9-209ENST00000521167 ARHGEF40Q8TER5 1519 aa16.52■□□□□ 0.24
TRAPPC9-209ENST00000521167 GPATCH8Q9UKJ3 1502 aaKnown RBP16.51■□□□□ 0.23
TRAPPC9-209ENST00000521167 ZNF518AQ6AHZ1 1483 aa16.51■□□□□ 0.23
TRAPPC9-209ENST00000521167 ZFYVE16Q7Z3T8 1539 aa16.5■□□□□ 0.23
TRAPPC9-209ENST00000521167 EHBP1L1Q8N3D4 1523 aa16.5■□□□□ 0.23
TRAPPC9-209ENST00000521167 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
TRAPPC9-209ENST00000521167 CCNB3Q8WWL7 1395 aa16.5■□□□□ 0.23
TRAPPC9-209ENST00000521167 ARID4BQ4LE39 1312 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC9-209ENST00000521167 AFAP1Q8N556 730 aa16.48■□□□□ 0.23
TRAPPC9-209ENST00000521167 KDM5CP41229 1560 aa16.47■□□□□ 0.23
TRAPPC9-209ENST00000521167 ADAMTSL3P82987 1691 aa16.47■□□□□ 0.23
TRAPPC9-209ENST00000521167 ITSN2Q9NZM3 1697 aa16.47■□□□□ 0.23
TRAPPC9-209ENST00000521167 YEATS2Q9ULM3 1422 aa16.47■□□□□ 0.23
TRAPPC9-209ENST00000521167 ABCC1P33527 1531 aa16.47■□□□□ 0.23
TRAPPC9-209ENST00000521167 CFDP1Q9UEE9 299 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC9-209ENST00000521167 BCORL1Q5H9F3 1711 aa16.47■□□□□ 0.23
TRAPPC9-209ENST00000521167 TIAM1Q13009 1591 aa16.47■□□□□ 0.23
TRAPPC9-209ENST00000521167 ATP10AO60312 1499 aa16.46■□□□□ 0.23
TRAPPC9-209ENST00000521167 MAP3K1Q13233 1512 aa16.45■□□□□ 0.22
TRAPPC9-209ENST00000521167 ARHGEF12Q9NZN5 1544 aa16.45■□□□□ 0.22
TRAPPC9-209ENST00000521167 ZNF777Q9ULD5 760 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC9-209ENST00000521167 SUPT6HQ7KZ85 1726 aaKnown RBP16.45■□□□□ 0.22
TRAPPC9-209ENST00000521167 PLEKHH2Q8IVE3 1493 aa16.44■□□□□ 0.22
TRAPPC9-209ENST00000521167 MLH3Q9UHC1 1453 aa16.44■□□□□ 0.22
TRAPPC9-209ENST00000521167 KIAA1107Q9UPP5 1409 aa16.44■□□□□ 0.22
TRAPPC9-209ENST00000521167 TRAPPC8Q9Y2L5 1435 aa16.44■□□□□ 0.22
TRAPPC9-209ENST00000521167 SAMD9LQ8IVG5 1584 aa16.43■□□□□ 0.22
TRAPPC9-209ENST00000521167 HECW2Q9P2P5 1572 aa16.43■□□□□ 0.22
TRAPPC9-209ENST00000521167 MYT1LQ9UL68 1186 aa16.42■□□□□ 0.22
TRAPPC9-209ENST00000521167 C9orf84Q5VXU9 1444 aa16.42■□□□□ 0.22
TRAPPC9-209ENST00000521167 NCOA2Q15596 1464 aa16.41■□□□□ 0.22
TRAPPC9-209ENST00000521167 LRRC9Q6ZRR7 1453 aa16.41■□□□□ 0.22
TRAPPC9-209ENST00000521167 HNRNPMP52272 730 aaKnown RBP eCLIP16.4■□□□□ 0.227e-7■■■■□ 23.6
TRAPPC9-209ENST00000521167 SIGLEC1Q9BZZ2 1709 aa16.39■□□□□ 0.21
TRAPPC9-209ENST00000521167 SYCP2Q9BX26 1530 aa16.39■□□□□ 0.21
TRAPPC9-209ENST00000521167 KIDINS220Q9ULH0 1771 aa16.38■□□□□ 0.21
TRAPPC9-209ENST00000521167 APLP2Q06481 763 aa16.38■□□□□ 0.21
TRAPPC9-209ENST00000521167 REREQ9P2R6 1566 aa16.38■□□□□ 0.21
TRAPPC9-209ENST00000521167 DIP2CQ9Y2E4 1556 aa16.38■□□□□ 0.21
TRAPPC9-209ENST00000521167 MADDQ8WXG6 1647 aa16.37■□□□□ 0.21
TRAPPC9-209ENST00000521167 PTPRMP28827 1452 aa16.37■□□□□ 0.21
TRAPPC9-209ENST00000521167 SPINK5Q9NQ38 1064 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC9-209ENST00000521167 ABCA6Q8N139 1617 aa16.36■□□□□ 0.21
TRAPPC9-209ENST00000521167 SPAG9O60271 1321 aaKnown RBP16.36■□□□□ 0.21
TRAPPC9-209ENST00000521167 KANK4Q5T7N3 995 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC9-209ENST00000521167 RIMS1Q86UR5 1692 aaKnown RBP16.34■□□□□ 0.21
TRAPPC9-209ENST00000521167 MLECQ14165 292 aa16.34■□□□□ 0.21
TRAPPC9-209ENST00000521167 RSPH4AQ5TD94 716 aa16.34■□□□□ 0.21
TRAPPC9-209ENST00000521167 ZNF644Q9H582 1327 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC9-209ENST00000521167 MBD5Q9P267 1494 aa16.33■□□□□ 0.2
TRAPPC9-209ENST00000521167 FER1L4A9Z1Z3 1794 aa16.33■□□□□ 0.2
TRAPPC9-209ENST00000521167 AGLP35573 1532 aa16.32■□□□□ 0.2
TRAPPC9-209ENST00000521167 ATP7AQ04656 1500 aa16.31■□□□□ 0.2
TRAPPC9-209ENST00000521167 INO80Q9ULG1 1556 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC9-209ENST00000521167 CAPN15O75808 1086 aa16.29■□□□□ 0.2
TRAPPC9-209ENST00000521167 CAMSAP2Q08AD1 1489 aa16.29■□□□□ 0.2
TRAPPC9-209ENST00000521167 RTEL1-TNFRSF6BF6WH68 1400 aa16.28■□□□□ 0.2
TRAPPC9-209ENST00000521167 SETD1BQ9UPS6 1966 aaKnown RBP16.28■□□□□ 0.2
TRAPPC9-209ENST00000521167 MIA2Q96PC5 1412 aa16.28■□□□□ 0.2
TRAPPC9-209ENST00000521167 ADGBQ8N7X0 1667 aa16.27■□□□□ 0.19
TRAPPC9-209ENST00000521167 MYOM3Q5VTT5 1437 aa16.27■□□□□ 0.19
TRAPPC9-209ENST00000521167 ARHGEF5Q12774 1597 aa16.26■□□□□ 0.19
TRAPPC9-209ENST00000521167 SAMD1Q6SPF0 538 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC9-209ENST00000521167 CCDC141Q6ZP82 1450 aa16.26■□□□□ 0.19
TRAPPC9-209ENST00000521167 MYCNP04198 464 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC9-209ENST00000521167 A2MP01023 1474 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms