RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 PAXIP1Q6ZW49 1069 aaPredicted RBP13.07□□□□□ -0.32
PTPN12-214ENST00000520947 CFAP44Q96MT7 982 aa13.07□□□□□ -0.32
PTPN12-214ENST00000520947 SPRYD3Q8NCJ5 442 aa13.06□□□□□ -0.32
PTPN12-214ENST00000520947 TMEM92Q6UXU6 159 aa13.05□□□□□ -0.32
PTPN12-214ENST00000520947 ST18O60284 1047 aa13.04□□□□□ -0.32
PTPN12-214ENST00000520947 PCDH10Q9P2E7 1040 aa13.01□□□□□ -0.33
PTPN12-214ENST00000520947 C2orf72A6NCS6 295 aa12.96□□□□□ -0.33
PTPN12-214ENST00000520947 TMC2Q8TDI7 906 aa12.95□□□□□ -0.34
PTPN12-214ENST00000520947 SNPHO15079 494 aa12.94□□□□□ -0.34
PTPN12-214ENST00000520947 KIF3CO14782 793 aa12.91□□□□□ -0.34
PTPN12-214ENST00000520947 CADPS2Q86UW7 1296 aa12.9□□□□□ -0.34
PTPN12-214ENST00000520947 CDAN1Q8IWY9 1227 aa12.89□□□□□ -0.35
PTPN12-214ENST00000520947 GPHNQ9NQX3 736 aaPredicted RBP12.87□□□□□ -0.35
PTPN12-214ENST00000520947 MARVELD3Q96A59 401 aa12.86□□□□□ -0.35
PTPN12-214ENST00000520947 NCKAP5LQ9HCH0 1330 aa12.86□□□□□ -0.35
PTPN12-214ENST00000520947 HOXB3P14651 431 aaPredicted RBP12.84□□□□□ -0.35
PTPN12-214ENST00000520947 CRISPLD2Q9H0B8 497 aa12.84□□□□□ -0.35
PTPN12-214ENST00000520947 PDE4AP27815 886 aa12.83□□□□□ -0.36
PTPN12-214ENST00000520947 PLCB2Q00722 1185 aa12.82□□□□□ -0.36
PTPN12-214ENST00000520947 DSG2Q14126 1118 aa12.82□□□□□ -0.36
PTPN12-214ENST00000520947 LARP6Q9BRS8 491 aaKnown RBP12.82□□□□□ -0.36
PTPN12-214ENST00000520947 DOK7Q18PE1 504 aa12.81□□□□□ -0.36
PTPN12-214ENST00000520947 FOXK1P85037 733 aa12.8□□□□□ -0.36
PTPN12-214ENST00000520947 PLPP6Q8IY26 295 aa12.8□□□□□ -0.36
PTPN12-214ENST00000520947 ZNF710Q8N1W2 664 aa12.8□□□□□ -0.36
PTPN12-214ENST00000520947 TSHZ2Q9NRE2 1034 aa12.79□□□□□ -0.36
PTPN12-214ENST00000520947 PPP1R15BQ5SWA1 713 aa12.77□□□□□ -0.37
PTPN12-214ENST00000520947 RIMBP2O15034 1052 aa12.75□□□□□ -0.37
PTPN12-214ENST00000520947 DDX27Q96GQ7 796 aaKnown RBP12.75□□□□□ -0.37
PTPN12-214ENST00000520947 EMP3P54852 163 aa12.73□□□□□ -0.37
PTPN12-214ENST00000520947 MFSD10Q14728 455 aa12.72□□□□□ -0.37
PTPN12-214ENST00000520947 ARSIQ5FYB1 569 aa12.7□□□□□ -0.38
PTPN12-214ENST00000520947 KHSRPQ92945 711 aaKnown RBP eCLIP12.69□□□□□ -0.382e-9■■□□□ 13.4
PTPN12-214ENST00000520947 FAM205CA6NFA0 338 aa12.68□□□□□ -0.38
PTPN12-214ENST00000520947 HAP1P54257 671 aaPredicted RBP12.68□□□□□ -0.38
PTPN12-214ENST00000520947 ZSWIM6Q9HCJ5 1215 aa12.68□□□□□ -0.38
PTPN12-214ENST00000520947 POTEB3A0JP26 581 aa12.67□□□□□ -0.38
PTPN12-214ENST00000520947 SLC34A2O95436 690 aa12.67□□□□□ -0.38
PTPN12-214ENST00000520947 HOXB1P14653 301 aaPredicted RBP12.67□□□□□ -0.38
PTPN12-214ENST00000520947 GPR153Q6NV75 609 aa12.67□□□□□ -0.38
PTPN12-214ENST00000520947 POTEBQ6S5H4 581 aa12.67□□□□□ -0.38
PTPN12-214ENST00000520947 UPF1Q92900 1129 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTPN12-214ENST00000520947 PCDHGA4Q9Y5G9 962 aa12.67□□□□□ -0.38
PTPN12-214ENST00000520947 HS3ST6Q96QI5 342 aa12.66□□□□□ -0.38
PTPN12-214ENST00000520947 WDR70Q9NW82 654 aa12.64□□□□□ -0.39
PTPN12-214ENST00000520947 PTCD2Q8WV60 388 aaKnown RBP12.63□□□□□ -0.39
PTPN12-214ENST00000520947 NUDT7P0C024 238 aa12.62□□□□□ -0.39
PTPN12-214ENST00000520947 OXER1Q8TDS5 423 aa12.6□□□□□ -0.39
PTPN12-214ENST00000520947 EMILIN3Q9NT22 766 aa12.59□□□□□ -0.39
PTPN12-214ENST00000520947 TBC1D12O60347 775 aa12.58□□□□□ -0.4
PTPN12-214ENST00000520947 SPNS2Q8IVW8 549 aa12.57□□□□□ -0.4
PTPN12-214ENST00000520947 ERBB3P21860 1342 aa12.57□□□□□ -0.4
PTPN12-214ENST00000520947 KRTAP3-3Q9BYR6 98 aa12.56□□□□□ -0.4
PTPN12-214ENST00000520947 KRTAP3-2Q9BYR7 98 aa12.56□□□□□ -0.4
PTPN12-214ENST00000520947 CAMK2BQ13554 666 aa12.55□□□□□ -0.4
PTPN12-214ENST00000520947 MAP3K9P80192 1104 aa12.54□□□□□ -0.4
PTPN12-214ENST00000520947 E2F4Q16254 413 aa12.54□□□□□ -0.4
PTPN12-214ENST00000520947 MMRN1Q13201 1228 aa12.52□□□□□ -0.41
PTPN12-214ENST00000520947 VARS2Q5ST30 1063 aaKnown RBP12.52□□□□□ -0.41
PTPN12-214ENST00000520947 LHX6Q9UPM6 363 aa12.52□□□□□ -0.41
PTPN12-214ENST00000520947 ZNF316A6NFI3 1004 aaPredicted RBP12.51□□□□□ -0.41
PTPN12-214ENST00000520947 DPYSL4O14531 572 aa12.51□□□□□ -0.41
PTPN12-214ENST00000520947 KDM4FA0A1W2PPD8 638 aa12.49□□□□□ -0.41
PTPN12-214ENST00000520947 EVI5O60447 810 aa12.48□□□□□ -0.41
PTPN12-214ENST00000520947 KDM2AQ9Y2K7 1162 aa12.46□□□□□ -0.41
PTPN12-214ENST00000520947 KCNV2Q8TDN2 545 aa12.42□□□□□ -0.42
PTPN12-214ENST00000520947 VSIG10Q8N0Z9 540 aa12.39□□□□□ -0.43
PTPN12-214ENST00000520947 ANO8Q9HCE9 1232 aaPredicted RBP12.39□□□□□ -0.43
PTPN12-214ENST00000520947 ZNF687Q8N1G0 1237 aa12.38□□□□□ -0.43
PTPN12-214ENST00000520947 ZNF454Q8N9F8 522 aa12.38□□□□□ -0.43
PTPN12-214ENST00000520947 PSDA5PKW4 1024 aaPredicted RBP12.37□□□□□ -0.43
PTPN12-214ENST00000520947 ARIH1Q9Y4X5 557 aaPredicted RBP12.36□□□□□ -0.43
PTPN12-214ENST00000520947 PDIA6Q15084 440 aa12.35□□□□□ -0.43
PTPN12-214ENST00000520947 PPP4R3BQ5MIZ7 849 aa12.35□□□□□ -0.43
PTPN12-214ENST00000520947 P3H3Q8IVL6 736 aa12.34□□□□□ -0.43
PTPN12-214ENST00000520947 SPDYE16A6NNV3 312 aaPredicted RBP12.33□□□□□ -0.44
PTPN12-214ENST00000520947 FOSBP53539 338 aa12.33□□□□□ -0.44
PTPN12-214ENST00000520947 DDX12PQ92771 950 aa12.33□□□□□ -0.44
PTPN12-214ENST00000520947 ARHGEF1Q92888 912 aaKnown RBP12.33□□□□□ -0.44
PTPN12-214ENST00000520947 JPH4Q96JJ6 628 aa12.32□□□□□ -0.44
PTPN12-214ENST00000520947 AXIN2Q9Y2T1 843 aa12.32□□□□□ -0.44
PTPN12-214ENST00000520947 PCDHGA10Q9Y5H3 936 aa12.3□□□□□ -0.44
PTPN12-214ENST00000520947 POTEEQ6S8J3 1075 aa12.29□□□□□ -0.44
PTPN12-214ENST00000520947 ZDHHC16Q969W1 377 aa12.28□□□□□ -0.44
PTPN12-214ENST00000520947 GRXCR2A6NFK2 248 aa12.27□□□□□ -0.45
PTPN12-214ENST00000520947 PHF14O94880 888 aa12.27□□□□□ -0.45
PTPN12-214ENST00000520947 PTGER2P43116 358 aa12.26□□□□□ -0.45
PTPN12-214ENST00000520947 ADAM33Q9BZ11 813 aa12.26□□□□□ -0.45
PTPN12-214ENST00000520947 PBX2P40425 430 aa12.25□□□□□ -0.45
PTPN12-214ENST00000520947 PSEN2P49810 448 aa12.25□□□□□ -0.45
PTPN12-214ENST00000520947 TYW1BQ6NUM6 668 aa12.25□□□□□ -0.45
PTPN12-214ENST00000520947 KCNK17Q96T54 332 aa12.25□□□□□ -0.45
PTPN12-214ENST00000520947 ARHGAP33O14559 1287 aa12.24□□□□□ -0.45
PTPN12-214ENST00000520947 NBR1Q14596 966 aa12.24□□□□□ -0.45
PTPN12-214ENST00000520947 RBM33Q96EV2 1170 aaKnown RBP12.23□□□□□ -0.45
PTPN12-214ENST00000520947 BCL2L12Q9HB09 334 aa12.23□□□□□ -0.45
PTPN12-214ENST00000520947 SLC24A1O60721 1099 aa12.22□□□□□ -0.45
PTPN12-214ENST00000520947 ANKRD13DQ6ZTN6 518 aa12.22□□□□□ -0.45
PTPN12-214ENST00000520947 EPAS1Q99814 870 aa12.22□□□□□ -0.45
PTPN12-214ENST00000520947 FBXW7Q969H0 707 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms