RNA–Protein interactions for RNA: ENST00000520709.5

TMEM55A-205, humanhuman

TSL 3

Gene TMEM55A, Length 649 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-205ENST00000520709 FER1L4A9Z1Z3 1794 aa22.52■■□□□ 1.2
TMEM55A-205ENST00000520709 LMTK3Q96Q04 1460 aa22.49■■□□□ 1.19
TMEM55A-205ENST00000520709 CDC42BPBQ9Y5S2 1711 aa22.48■■□□□ 1.19
TMEM55A-205ENST00000520709 UBTFP17480 764 aaKnown RBP22.47■■□□□ 1.19
TMEM55A-205ENST00000520709 TROQ12816 1431 aaPredicted RBP22.47■■□□□ 1.19
TMEM55A-205ENST00000520709 SCAPERQ9BY12 1400 aa22.46■■□□□ 1.19
TMEM55A-205ENST00000520709 KDM5CP41229 1560 aa22.46■■□□□ 1.19
TMEM55A-205ENST00000520709 ARID4BQ4LE39 1312 aaPredicted RBP22.44■■□□□ 1.18
TMEM55A-205ENST00000520709 PREX2Q70Z35 1606 aa22.44■■□□□ 1.18
TMEM55A-205ENST00000520709 EHMT2Q96KQ7 1210 aa22.42■■□□□ 1.18
TMEM55A-205ENST00000520709 ARHGEF12Q9NZN5 1544 aa22.41■■□□□ 1.18
TMEM55A-205ENST00000520709 ARHGAP5Q13017 1502 aa22.39■■□□□ 1.17
TMEM55A-205ENST00000520709 CDC42BPAQ5VT25 1732 aa22.39■■□□□ 1.17
TMEM55A-205ENST00000520709 ZNF518AQ6AHZ1 1483 aa22.39■■□□□ 1.17
TMEM55A-205ENST00000520709 ITSN2Q9NZM3 1697 aa22.39■■□□□ 1.17
TMEM55A-205ENST00000520709 CLIP1P30622 1438 aa22.39■■□□□ 1.17
TMEM55A-205ENST00000520709 C9orf84Q5VXU9 1444 aa22.39■■□□□ 1.17
TMEM55A-205ENST00000520709 ATP10AO60312 1499 aa22.38■■□□□ 1.17
TMEM55A-205ENST00000520709 CCDC18Q5T9S5 1454 aa22.38■■□□□ 1.17
TMEM55A-205ENST00000520709 DIP2CQ9Y2E4 1556 aa22.38■■□□□ 1.17
TMEM55A-205ENST00000520709 CASKIN1Q8WXD9 1431 aa22.37■■□□□ 1.17
TMEM55A-205ENST00000520709 REREQ9P2R6 1566 aa22.37■■□□□ 1.17
TMEM55A-205ENST00000520709 CDK11AQ9UQ88 783 aaPredicted RBP22.36■■□□□ 1.17
TMEM55A-205ENST00000520709 ABCC1P33527 1531 aa22.36■■□□□ 1.17
TMEM55A-205ENST00000520709 ABCA6Q8N139 1617 aa22.35■■□□□ 1.17
TMEM55A-205ENST00000520709 PREX1Q8TCU6 1659 aa22.34■■□□□ 1.17
TMEM55A-205ENST00000520709 EFCAB2Q5VUJ9 269 aa22.34■■□□□ 1.17
TMEM55A-205ENST00000520709 ATP1B4Q9UN42 357 aaPredicted RBP22.34■■□□□ 1.17
TMEM55A-205ENST00000520709 FYCO1Q9BQS8 1478 aa22.32■■□□□ 1.16
TMEM55A-205ENST00000520709 KIDINS220Q9ULH0 1771 aa22.29■■□□□ 1.16
TMEM55A-205ENST00000520709 MLH3Q9UHC1 1453 aa22.28■■□□□ 1.16
TMEM55A-205ENST00000520709 C3P01024 1663 aa22.24■■□□□ 1.15
TMEM55A-205ENST00000520709 AGLP35573 1532 aa22.24■■□□□ 1.15
TMEM55A-205ENST00000520709 MLECQ14165 292 aa22.23■■□□□ 1.15
TMEM55A-205ENST00000520709 SAMD9LQ8IVG5 1584 aa22.23■■□□□ 1.15
TMEM55A-205ENST00000520709 SETD1BQ9UPS6 1966 aaKnown RBP22.23■■□□□ 1.15
TMEM55A-205ENST00000520709 TRAPPC8Q9Y2L5 1435 aa22.23■■□□□ 1.15
TMEM55A-205ENST00000520709 AFAP1Q8N556 730 aa22.22■■□□□ 1.15
TMEM55A-205ENST00000520709 FBXO41Q8TF61 875 aa22.22■■□□□ 1.15
TMEM55A-205ENST00000520709 STRCQ7RTU9 1775 aa22.2■■□□□ 1.14
TMEM55A-205ENST00000520709 HSPA2P54652 639 aa22.19■■□□□ 1.14
TMEM55A-205ENST00000520709 SYCP2Q9BX26 1530 aa22.16■■□□□ 1.14
TMEM55A-205ENST00000520709 PLPPR3Q6T4P5 718 aa22.15■■□□□ 1.14
TMEM55A-205ENST00000520709 GPATCH8Q9UKJ3 1502 aaKnown RBP22.15■■□□□ 1.14
TMEM55A-205ENST00000520709 MROH2AA6NES4 1674 aa22.14■■□□□ 1.14
TMEM55A-205ENST00000520709 INO80Q9ULG1 1556 aaPredicted RBP22.14■■□□□ 1.13
TMEM55A-205ENST00000520709 PLXNC1O60486 1568 aa22.11■■□□□ 1.13
TMEM55A-205ENST00000520709 SUPT6HQ7KZ85 1726 aaKnown RBP22.09■■□□□ 1.13
TMEM55A-205ENST00000520709 CEBPAP49715 358 aaPredicted RBP22.09■■□□□ 1.13
TMEM55A-205ENST00000520709 ATP7AQ04656 1500 aa22.08■■□□□ 1.13
TMEM55A-205ENST00000520709 TIAM1Q13009 1591 aa22.08■■□□□ 1.12
TMEM55A-205ENST00000520709 UHRF1BP1Q6BDS2 1440 aa22.07■■□□□ 1.12
TMEM55A-205ENST00000520709 KIAA1107Q9UPP5 1409 aa22.06■■□□□ 1.12
TMEM55A-205ENST00000520709 EHBP1L1Q8N3D4 1523 aa22.05■■□□□ 1.12
TMEM55A-205ENST00000520709 PLEKHH2Q8IVE3 1493 aa22.04■■□□□ 1.12
TMEM55A-205ENST00000520709 CNTLNQ9NXG0 1405 aa22.04■■□□□ 1.12
TMEM55A-205ENST00000520709 ADGBQ8N7X0 1667 aa22.04■■□□□ 1.12
TMEM55A-205ENST00000520709 MYT1LQ9UL68 1186 aa22.03■■□□□ 1.12
TMEM55A-205ENST00000520709 CLTCQ00610 1675 aaKnown RBP22.01■■□□□ 1.11
TMEM55A-205ENST00000520709 ZNF142P52746 1687 aaPredicted RBP22■■□□□ 1.11
TMEM55A-205ENST00000520709 MTUS2Q5JR59 1369 aa21.98■■□□□ 1.11
TMEM55A-205ENST00000520709 CCNB3Q8WWL7 1395 aa21.98■■□□□ 1.11
TMEM55A-205ENST00000520709 A2MP01023 1474 aa21.96■■□□□ 1.11
TMEM55A-205ENST00000520709 MYO3AQ8NEV4 1616 aa21.96■■□□□ 1.11
TMEM55A-205ENST00000520709 CERKQ8TCT0 537 aa21.96■■□□□ 1.11
TMEM55A-205ENST00000520709 ZNF777Q9ULD5 760 aaPredicted RBP21.96■■□□□ 1.11
TMEM55A-205ENST00000520709 SPAG9O60271 1321 aaKnown RBP21.96■■□□□ 1.11
TMEM55A-205ENST00000520709 NPATQ14207 1427 aa21.96■■□□□ 1.11
TMEM55A-205ENST00000520709 HNRNPMP52272 730 aaKnown RBP eCLIP21.95■■□□□ 1.1
TMEM55A-205ENST00000520709 CEP162Q5TB80 1403 aa21.95■■□□□ 1.1
TMEM55A-205ENST00000520709 PTPRTO14522 1441 aa21.94■■□□□ 1.1
TMEM55A-205ENST00000520709 MBD5Q9P267 1494 aa21.94■■□□□ 1.1
TMEM55A-205ENST00000520709 NCOA1Q15788 1441 aa21.92■■□□□ 1.1
TMEM55A-205ENST00000520709 CFDP1Q9UEE9 299 aaPredicted RBP21.92■■□□□ 1.1
TMEM55A-205ENST00000520709 CAMSAP1Q5T5Y3 1602 aa21.89■■□□□ 1.09
TMEM55A-205ENST00000520709 LTBP4Q8N2S1 1624 aa21.89■■□□□ 1.09
TMEM55A-205ENST00000520709 ESF1Q9H501 851 aaKnown RBP21.89■■□□□ 1.09
TMEM55A-205ENST00000520709 DMRT2Q9Y5R5 561 aa21.88■■□□□ 1.09
TMEM55A-205ENST00000520709 ZMYM3Q14202 1370 aa21.87■■□□□ 1.09
TMEM55A-205ENST00000520709 CEP170BQ9Y4F5 1589 aaPredicted RBP21.87■■□□□ 1.09
TMEM55A-205ENST00000520709 RTEL1-TNFRSF6BF6WH68 1400 aa21.86■■□□□ 1.09
TMEM55A-205ENST00000520709 PTPRKQ15262 1439 aa21.85■■□□□ 1.09
TMEM55A-205ENST00000520709 CAMSAP2Q08AD1 1489 aa21.84■■□□□ 1.09
TMEM55A-205ENST00000520709 NCOA2Q15596 1464 aa21.84■■□□□ 1.09
TMEM55A-205ENST00000520709 ZNF644Q9H582 1327 aaPredicted RBP21.84■■□□□ 1.09
TMEM55A-205ENST00000520709 CCDC141Q6ZP82 1450 aa21.83■■□□□ 1.08
TMEM55A-205ENST00000520709 FAM135AQ9P2D6 1515 aa21.82■■□□□ 1.08
TMEM55A-205ENST00000520709 PLA2R1Q13018 1463 aa21.82■■□□□ 1.08
TMEM55A-205ENST00000520709 ARHGEF5Q12774 1597 aa21.82■■□□□ 1.08
TMEM55A-205ENST00000520709 IQSEC2Q5JU85 1478 aa21.81■■□□□ 1.08
TMEM55A-205ENST00000520709 TCOF1Q13428 1488 aaKnown RBP21.78■■□□□ 1.08
TMEM55A-205ENST00000520709 POLR1AO95602 1720 aaPredicted RBP21.77■■□□□ 1.08
TMEM55A-205ENST00000520709 DNMT1P26358 1616 aaKnown RBP21.77■■□□□ 1.07
TMEM55A-205ENST00000520709 DHX29Q7Z478 1369 aaKnown RBP21.76■■□□□ 1.07
TMEM55A-205ENST00000520709 KDM5DQ9BY66 1539 aa21.76■■□□□ 1.07
TMEM55A-205ENST00000520709 PPP6R1Q9UPN7 881 aa21.75■■□□□ 1.07
TMEM55A-205ENST00000520709 MAST1Q9Y2H9 1570 aa21.74■■□□□ 1.07
TMEM55A-205ENST00000520709 VPS8Q8N3P4 1428 aa21.74■■□□□ 1.07
TMEM55A-205ENST00000520709 RNF17Q9BXT8 1623 aaKnown RBP21.73■■□□□ 1.07
TMEM55A-205ENST00000520709 GGT6Q6P531 493 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms