RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 TPRNQ4KMQ1 711 aa10.72□□□□□ -0.69
CTNNA1-222ENST00000520400 PLCG2P16885 1265 aa10.71□□□□□ -0.69
CTNNA1-222ENST00000520400 P3H3Q8IVL6 736 aa10.71□□□□□ -0.69
CTNNA1-222ENST00000520400 DDX27Q96GQ7 796 aaKnown RBP10.71□□□□□ -0.69
CTNNA1-222ENST00000520400 GPHNQ9NQX3 736 aaPredicted RBP10.71□□□□□ -0.69
CTNNA1-222ENST00000520400 BOLA1Q9Y3E2 137 aa10.71□□□□□ -0.69
CTNNA1-222ENST00000520400 DSG2Q14126 1118 aa10.7□□□□□ -0.7
CTNNA1-222ENST00000520400 CAMK2BQ13554 666 aa10.69□□□□□ -0.7
CTNNA1-222ENST00000520400 METRNQ9UJH8 293 aa10.69□□□□□ -0.7
CTNNA1-222ENST00000520400 KIF3CO14782 793 aa10.68□□□□□ -0.7
CTNNA1-222ENST00000520400 PPP1R15BQ5SWA1 713 aa10.67□□□□□ -0.7
CTNNA1-222ENST00000520400 SLC39A7Q92504 469 aa10.67□□□□□ -0.7
CTNNA1-222ENST00000520400 C2orf72A6NCS6 295 aa10.66□□□□□ -0.7
CTNNA1-222ENST00000520400 ARHGEF1Q92888 912 aaKnown RBP10.66□□□□□ -0.7
CTNNA1-222ENST00000520400 SEC24BO95487 1268 aa10.65□□□□□ -0.7
CTNNA1-222ENST00000520400 C7P10643 843 aa10.65□□□□□ -0.7
CTNNA1-222ENST00000520400 EMILIN3Q9NT22 766 aa10.65□□□□□ -0.7
CTNNA1-222ENST00000520400 SEMA3EO15041 775 aa10.64□□□□□ -0.71
CTNNA1-222ENST00000520400 FOXK1P85037 733 aa10.62□□□□□ -0.71
CTNNA1-222ENST00000520400 ARIH1Q9Y4X5 557 aaPredicted RBP10.61□□□□□ -0.71
CTNNA1-222ENST00000520400 L3MBTL3Q96JM7 780 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-222ENST00000520400 POTEJP0CG39 1038 aa10.59□□□□□ -0.71
CTNNA1-222ENST00000520400 PLPP6Q8IY26 295 aa10.59□□□□□ -0.71
CTNNA1-222ENST00000520400 TMC2Q8TDI7 906 aa10.59□□□□□ -0.71
CTNNA1-222ENST00000520400 TESPA1A2RU30 521 aaPredicted RBP10.58□□□□□ -0.72
CTNNA1-222ENST00000520400 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.58□□□□□ -0.72
CTNNA1-222ENST00000520400 POTEB2H3BUK9 544 aa10.57□□□□□ -0.72
CTNNA1-222ENST00000520400 DPYSL4O14531 572 aa10.56□□□□□ -0.72
CTNNA1-222ENST00000520400 G3V3G9 751 aa10.53□□□□□ -0.72
CTNNA1-222ENST00000520400 MLLT3P42568 568 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-222ENST00000520400 LMOD2Q6P5Q4 547 aa10.53□□□□□ -0.72
CTNNA1-222ENST00000520400 UPF1Q92900 1129 aaKnown RBP eCLIP10.49□□□□□ -0.73
CTNNA1-222ENST00000520400 PDIA6Q15084 440 aa10.47□□□□□ -0.73
CTNNA1-222ENST00000520400 OXER1Q8TDS5 423 aa10.47□□□□□ -0.73
CTNNA1-222ENST00000520400 C3orf67Q6ZVT6 689 aa10.46□□□□□ -0.73
CTNNA1-222ENST00000520400 RBM26Q5T8P6 1007 aaKnown RBP10.43□□□□□ -0.74
CTNNA1-222ENST00000520400 LHX8Q68G74 356 aa10.43□□□□□ -0.74
CTNNA1-222ENST00000520400 ZC3H15Q8WU90 426 aaKnown RBP10.42□□□□□ -0.74
CTNNA1-222ENST00000520400 SPDYE16A6NNV3 312 aaPredicted RBP10.39□□□□□ -0.75
CTNNA1-222ENST00000520400 PRIM1P49642 420 aaKnown RBP10.39□□□□□ -0.75
CTNNA1-222ENST00000520400 MAP3K9P80192 1104 aa10.39□□□□□ -0.75
CTNNA1-222ENST00000520400 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.39□□□□□ -0.75
CTNNA1-222ENST00000520400 PTCD2Q8WV60 388 aaKnown RBP10.37□□□□□ -0.75
CTNNA1-222ENST00000520400 SLC34A2O95436 690 aa10.35□□□□□ -0.75
CTNNA1-222ENST00000520400 EVI5O60447 810 aa10.34□□□□□ -0.75
CTNNA1-222ENST00000520400 HOXB3P14651 431 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-222ENST00000520400 DDX12PQ92771 950 aa10.34□□□□□ -0.75
CTNNA1-222ENST00000520400 KDM4FA0A1W2PPD8 638 aa10.33□□□□□ -0.76
CTNNA1-222ENST00000520400 GRXCR2A6NFK2 248 aa10.33□□□□□ -0.76
CTNNA1-222ENST00000520400 GPR37O15354 613 aa10.33□□□□□ -0.76
CTNNA1-222ENST00000520400 OSBPP22059 807 aa10.32□□□□□ -0.76
CTNNA1-222ENST00000520400 ZMYND10O75800 440 aa10.31□□□□□ -0.76
CTNNA1-222ENST00000520400 PTGER2P43116 358 aa10.31□□□□□ -0.76
CTNNA1-222ENST00000520400 KHSRPQ92945 711 aaKnown RBP eCLIP10.31□□□□□ -0.76
CTNNA1-222ENST00000520400 TULP1O00294 542 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-222ENST00000520400 SMYD5Q6GMV2 418 aa10.3□□□□□ -0.76
CTNNA1-222ENST00000520400 ANO8Q9HCE9 1232 aaPredicted RBP10.3□□□□□ -0.76
CTNNA1-222ENST00000520400 PCDHGA4Q9Y5G9 962 aa10.3□□□□□ -0.76
CTNNA1-222ENST00000520400 SLAIN1Q8ND83 568 aa10.29□□□□□ -0.76
CTNNA1-222ENST00000520400 SLC24A3Q9HC58 644 aa10.29□□□□□ -0.76
CTNNA1-222ENST00000520400 GPIHBP1Q8IV16 184 aa10.27□□□□□ -0.77
CTNNA1-222ENST00000520400 TBC1D12O60347 775 aa10.25□□□□□ -0.77
CTNNA1-222ENST00000520400 BARGINQ6ZT62 677 aa10.25□□□□□ -0.77
CTNNA1-222ENST00000520400 OTUD5Q96G74 571 aa10.25□□□□□ -0.77
CTNNA1-222ENST00000520400 ARSIQ5FYB1 569 aa10.23□□□□□ -0.77
CTNNA1-222ENST00000520400 FECHP22830 423 aa10.22□□□□□ -0.77
CTNNA1-222ENST00000520400 GPR153Q6NV75 609 aa10.22□□□□□ -0.77
CTNNA1-222ENST00000520400 PCDHGA10Q9Y5H3 936 aa10.22□□□□□ -0.77
CTNNA1-222ENST00000520400 NUDT7P0C024 238 aa10.21□□□□□ -0.77
CTNNA1-222ENST00000520400 CDHR5Q9HBB8 845 aa10.21□□□□□ -0.77
CTNNA1-222ENST00000520400 SCUBE2Q9NQ36 999 aa10.21□□□□□ -0.77
CTNNA1-222ENST00000520400 NUTM2FA1L443 756 aa10.2□□□□□ -0.78
CTNNA1-222ENST00000520400 BRPF1P55201 1214 aaPredicted RBP10.19□□□□□ -0.78
CTNNA1-222ENST00000520400 TSR1Q2NL82 804 aaKnown RBP10.17□□□□□ -0.78
CTNNA1-222ENST00000520400 MAMSTRQ6ZN01 415 aa10.17□□□□□ -0.78
CTNNA1-222ENST00000520400 NPDC1Q9NQX5 325 aaPredicted RBP10.17□□□□□ -0.78
CTNNA1-222ENST00000520400 PHF14O94880 888 aa10.16□□□□□ -0.78
CTNNA1-222ENST00000520400 EN1Q05925 392 aaPredicted RBP10.16□□□□□ -0.78
CTNNA1-222ENST00000520400 DOK7Q18PE1 504 aa10.16□□□□□ -0.78
CTNNA1-222ENST00000520400 RBM33Q96EV2 1170 aaKnown RBP10.16□□□□□ -0.78
CTNNA1-222ENST00000520400 FOSBP53539 338 aa10.15□□□□□ -0.78
CTNNA1-222ENST00000520400 PTGDRQ13258 359 aa10.14□□□□□ -0.79
CTNNA1-222ENST00000520400 JPH4Q96JJ6 628 aa10.13□□□□□ -0.79
CTNNA1-222ENST00000520400 LHX6Q9UPM6 363 aa10.12□□□□□ -0.79
CTNNA1-222ENST00000520400 EPAS1Q99814 870 aa10.11□□□□□ -0.79
CTNNA1-222ENST00000520400 ADAM33Q9BZ11 813 aa10.11□□□□□ -0.79
CTNNA1-222ENST00000520400 ZNF316A6NFI3 1004 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-222ENST00000520400 TRIM66O15016 1216 aa10.1□□□□□ -0.79
CTNNA1-222ENST00000520400 GNPATO15228 680 aa10.1□□□□□ -0.79
CTNNA1-222ENST00000520400 MAP3K7O43318 606 aa10.1□□□□□ -0.79
CTNNA1-222ENST00000520400 TYW1BQ6NUM6 668 aa10.1□□□□□ -0.79
CTNNA1-222ENST00000520400 ZSWIM6Q9HCJ5 1215 aa10.1□□□□□ -0.79
CTNNA1-222ENST00000520400 ZNF454Q8N9F8 522 aa10.09□□□□□ -0.79
CTNNA1-222ENST00000520400 AK7Q96M32 723 aa10.09□□□□□ -0.79
CTNNA1-222ENST00000520400 GPBP1L1Q9HC44 474 aaPredicted RBP10.09□□□□□ -0.79
CTNNA1-222ENST00000520400 FCHSD2O94868 740 aa10.08□□□□□ -0.8
CTNNA1-222ENST00000520400 HIC1Q14526 733 aa10.08□□□□□ -0.8
CTNNA1-222ENST00000520400 KRI1Q8N9T8 703 aaKnown RBP10.08□□□□□ -0.8
CTNNA1-222ENST00000520400 CCDC102AQ96A19 550 aa10.08□□□□□ -0.8
CTNNA1-222ENST00000520400 ZNF710Q8N1W2 664 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms