RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 CDC42BPBQ9Y5S2 1711 aa27.38■■□□□ 1.97
SDC2-205ENST00000520233 ARHGAP5Q13017 1502 aa27.38■■□□□ 1.97
SDC2-205ENST00000520233 EFCAB2Q5VUJ9 269 aa27.38■■□□□ 1.97
SDC2-205ENST00000520233 FGD6Q6ZV73 1430 aa27.35■■□□□ 1.97
SDC2-205ENST00000520233 PPRC1Q5VV67 1664 aaKnown RBP27.34■■□□□ 1.97
SDC2-205ENST00000520233 FANCAO15360 1455 aa27.34■■□□□ 1.97
SDC2-205ENST00000520233 TEX14Q8IWB6 1497 aa27.34■■□□□ 1.97
SDC2-205ENST00000520233 TSPOAP1O95153 1857 aa27.32■■□□□ 1.96
SDC2-205ENST00000520233 NEO1Q92859 1461 aa27.32■■□□□ 1.96
SDC2-205ENST00000520233 CFAP74Q9C0B2 1584 aa27.31■■□□□ 1.96
SDC2-205ENST00000520233 ZNF777Q9ULD5 760 aaPredicted RBP27.3■■□□□ 1.96
SDC2-205ENST00000520233 TCOF1Q13428 1488 aaKnown RBP27.27■■□□□ 1.96
SDC2-205ENST00000520233 AKNAQ7Z591 1439 aa27.27■■□□□ 1.96
SDC2-205ENST00000520233 RRBP1Q9P2E9 1410 aaKnown RBP27.27■■□□□ 1.96
SDC2-205ENST00000520233 PTPN23Q9H3S7 1636 aa27.27■■□□□ 1.96
SDC2-205ENST00000520233 SAMD9LQ8IVG5 1584 aa27.26■■□□□ 1.96
SDC2-205ENST00000520233 ZNF644Q9H582 1327 aaPredicted RBP27.26■■□□□ 1.95
SDC2-205ENST00000520233 CAMSAP2Q08AD1 1489 aa27.25■■□□□ 1.95
SDC2-205ENST00000520233 PLEKHH2Q8IVE3 1493 aa27.25■■□□□ 1.95
SDC2-205ENST00000520233 KIAA1107Q9UPP5 1409 aa27.22■■□□□ 1.95
SDC2-205ENST00000520233 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.22■■□□□ 1.95
SDC2-205ENST00000520233 ADGRL1O94910 1474 aa27.21■■□□□ 1.95
SDC2-205ENST00000520233 ABCC1P33527 1531 aa27.21■■□□□ 1.95
SDC2-205ENST00000520233 SCAPERQ9BY12 1400 aa27.19■■□□□ 1.94
SDC2-205ENST00000520233 FAM50AQ14320 339 aaKnown RBP27.19■■□□□ 1.94
SDC2-205ENST00000520233 SYCP2Q9BX26 1530 aa27.16■■□□□ 1.94
SDC2-205ENST00000520233 ARHGEF12Q9NZN5 1544 aa27.16■■□□□ 1.94
SDC2-205ENST00000520233 HNRNPMP52272 730 aaKnown RBP eCLIP27.16■■□□□ 1.944e-7■■□□□ 14.3
SDC2-205ENST00000520233 MBD5Q9P267 1494 aa27.15■■□□□ 1.94
SDC2-205ENST00000520233 RSPH4AQ5TD94 716 aa27.14■■□□□ 1.94
SDC2-205ENST00000520233 DENND4BO75064 1496 aaPredicted RBP27.13■■□□□ 1.93
SDC2-205ENST00000520233 ARHGEF5Q12774 1597 aa27.12■■□□□ 1.93
SDC2-205ENST00000520233 TRAPPC8Q9Y2L5 1435 aa27.1■■□□□ 1.93
SDC2-205ENST00000520233 POGZQ7Z3K3 1410 aa27.08■■□□□ 1.93
SDC2-205ENST00000520233 CCDC141Q6ZP82 1450 aa27.08■■□□□ 1.93
SDC2-205ENST00000520233 ZNF518AQ6AHZ1 1483 aa27.07■■□□□ 1.92
SDC2-205ENST00000520233 COL17A1Q9UMD9 1497 aaPredicted RBP27.07■■□□□ 1.92
SDC2-205ENST00000520233 DNMT1P26358 1616 aaKnown RBP27.07■■□□□ 1.92
SDC2-205ENST00000520233 DAPK1P53355 1430 aa27.07■■□□□ 1.92
SDC2-205ENST00000520233 ABCC5O15440 1437 aa27.06■■□□□ 1.92
SDC2-205ENST00000520233 RAPGEF3O95398 923 aa27.05■■□□□ 1.92
SDC2-205ENST00000520233 AFAP1Q8N556 730 aa27.05■■□□□ 1.92
SDC2-205ENST00000520233 TRIM26Q12899 539 aaPredicted RBP27.04■■□□□ 1.92
SDC2-205ENST00000520233 RICTORQ6R327 1708 aa27.02■■□□□ 1.92
SDC2-205ENST00000520233 TSPY4P0CV99 314 aa27.02■■□□□ 1.92
SDC2-205ENST00000520233 TSPY10P0CW01 314 aa27.02■■□□□ 1.92
SDC2-205ENST00000520233 KDM6BO15054 1643 aa27.01■■□□□ 1.92
SDC2-205ENST00000520233 KDM5CP41229 1560 aa27.01■■□□□ 1.92
SDC2-205ENST00000520233 FRMPD1Q5SYB0 1578 aa27.01■■□□□ 1.92
SDC2-205ENST00000520233 SHANK2Q9UPX8 1470 aa27■■□□□ 1.91
SDC2-205ENST00000520233 ITGAEP38570 1179 aa26.99■■□□□ 1.91
SDC2-205ENST00000520233 CROCC2H7BZ55 1655 aa26.98■■□□□ 1.91
SDC2-205ENST00000520233 PTPRKQ15262 1439 aa26.98■■□□□ 1.91
SDC2-205ENST00000520233 SPAG9O60271 1321 aaKnown RBP26.97■■□□□ 1.91
SDC2-205ENST00000520233 MAST1Q9Y2H9 1570 aa26.97■■□□□ 1.91
SDC2-205ENST00000520233 ZMYM4Q5VZL5 1548 aa26.96■■□□□ 1.91
SDC2-205ENST00000520233 RTEL1-TNFRSF6BF6WH68 1400 aa26.96■■□□□ 1.91
SDC2-205ENST00000520233 C9orf84Q5VXU9 1444 aa26.96■■□□□ 1.91
SDC2-205ENST00000520233 MLH3Q9UHC1 1453 aa26.95■■□□□ 1.91
SDC2-205ENST00000520233 HECW2Q9P2P5 1572 aa26.92■■□□□ 1.9
SDC2-205ENST00000520233 CHIC2Q9UKJ5 165 aa26.92■■□□□ 1.9
SDC2-205ENST00000520233 MAGI2Q86UL8 1455 aa26.92■■□□□ 1.9
SDC2-205ENST00000520233 INO80Q9ULG1 1556 aaPredicted RBP26.92■■□□□ 1.9
SDC2-205ENST00000520233 ATP7AQ04656 1500 aa26.9■■□□□ 1.9
SDC2-205ENST00000520233 ZFYVE16Q7Z3T8 1539 aa26.9■■□□□ 1.9
SDC2-205ENST00000520233 ADGRL2O95490 1459 aa26.89■■□□□ 1.9
SDC2-205ENST00000520233 MYT1LQ9UL68 1186 aa26.89■■□□□ 1.9
SDC2-205ENST00000520233 ROCK1Q13464 1354 aa26.88■■□□□ 1.89
SDC2-205ENST00000520233 KIDINS220Q9ULH0 1771 aa26.88■■□□□ 1.89
SDC2-205ENST00000520233 ANKRD30AQ9BXX3 1397 aa26.87■■□□□ 1.89
SDC2-205ENST00000520233 NCOA1Q15788 1441 aa26.86■■□□□ 1.89
SDC2-205ENST00000520233 ADGBQ8N7X0 1667 aa26.85■■□□□ 1.89
SDC2-205ENST00000520233 PLXNC1O60486 1568 aa26.84■■□□□ 1.89
SDC2-205ENST00000520233 YEATS2Q9ULM3 1422 aa26.83■■□□□ 1.89
SDC2-205ENST00000520233 RRP7BPQ9NSQ0 103 aa26.81■■□□□ 1.88
SDC2-205ENST00000520233 DIP2CQ9Y2E4 1556 aa26.8■■□□□ 1.88
SDC2-205ENST00000520233 ABCA6Q8N139 1617 aa26.79■■□□□ 1.88
SDC2-205ENST00000520233 KIF15Q9NS87 1388 aa26.79■■□□□ 1.88
SDC2-205ENST00000520233 ARHGEF40Q8TER5 1519 aa26.78■■□□□ 1.88
SDC2-205ENST00000520233 ATP10AO60312 1499 aa26.77■■□□□ 1.88
SDC2-205ENST00000520233 HFM1A2PYH4 1435 aa26.76■■□□□ 1.87
SDC2-205ENST00000520233 DUOX2Q9NRD8 1548 aa26.75■■□□□ 1.87
SDC2-205ENST00000520233 PCGF6Q9BYE7 350 aa26.74■■□□□ 1.87
SDC2-205ENST00000520233 A2MP01023 1474 aa26.74■■□□□ 1.87
SDC2-205ENST00000520233 NAIPQ13075 1403 aa26.73■■□□□ 1.87
SDC2-205ENST00000520233 DHX29Q7Z478 1369 aaKnown RBP26.73■■□□□ 1.87
SDC2-205ENST00000520233 REREQ9P2R6 1566 aa26.71■■□□□ 1.87
SDC2-205ENST00000520233 GCC2Q8IWJ2 1684 aa26.7■■□□□ 1.86
SDC2-205ENST00000520233 ERBINQ96RT1 1412 aa26.69■■□□□ 1.86
SDC2-205ENST00000520233 ANKRD50Q9ULJ7 1429 aa26.69■■□□□ 1.86
SDC2-205ENST00000520233 SETD5Q9C0A6 1442 aa26.67■■□□□ 1.86
SDC2-205ENST00000520233 AGLP35573 1532 aa26.63■■□□□ 1.85
SDC2-205ENST00000520233 EIF2AK4Q9P2K8 1649 aaKnown RBP26.62■■□□□ 1.85
SDC2-205ENST00000520233 KIF3BO15066 747 aa26.59■■□□□ 1.85
SDC2-205ENST00000520233 BCORL1Q5H9F3 1711 aa26.59■■□□□ 1.85
SDC2-205ENST00000520233 RAB3GAP2Q9H2M9 1393 aa26.58■■□□□ 1.85
SDC2-205ENST00000520233 SIGLEC1Q9BZZ2 1709 aa26.57■■□□□ 1.84
SDC2-205ENST00000520233 HRCP23327 699 aa26.57■■□□□ 1.84
SDC2-205ENST00000520233 ARID4BQ4LE39 1312 aaPredicted RBP26.55■■□□□ 1.84
SDC2-205ENST00000520233 ACIN1Q9UKV3 1341 aaKnown RBP26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms