RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 GALR2O43603 387 aaPredicted RBP10.88□□□□□ -0.67
HMGB1P46-201ENST00000520062 MICALL2Q8IY33 904 aa10.88□□□□□ -0.67
HMGB1P46-201ENST00000520062 TIMELESSQ9UNS1 1208 aa10.88□□□□□ -0.67
HMGB1P46-201ENST00000520062 BARGINQ6ZT62 677 aa10.87□□□□□ -0.67
HMGB1P46-201ENST00000520062 FOXK1P85037 733 aa10.86□□□□□ -0.67
HMGB1P46-201ENST00000520062 DSG2Q14126 1118 aa10.86□□□□□ -0.67
HMGB1P46-201ENST00000520062 PDIA6Q15084 440 aa10.86□□□□□ -0.67
HMGB1P46-201ENST00000520062 PDCD7Q8N8D1 485 aaKnown RBP10.86□□□□□ -0.67
HMGB1P46-201ENST00000520062 TMC2Q8TDI7 906 aa10.86□□□□□ -0.67
HMGB1P46-201ENST00000520062 NEUROD2Q15784 382 aa10.85□□□□□ -0.67
HMGB1P46-201ENST00000520062 IER5LQ5T953 404 aa10.85□□□□□ -0.67
HMGB1P46-201ENST00000520062 TMEM121BQ9BXQ6 578 aaPredicted RBP10.85□□□□□ -0.67
HMGB1P46-201ENST00000520062 MLLT3P42568 568 aaPredicted RBP10.84□□□□□ -0.67
HMGB1P46-201ENST00000520062 DPY19L2Q6NUT2 758 aa10.84□□□□□ -0.67
HMGB1P46-201ENST00000520062 EMILIN3Q9NT22 766 aa10.84□□□□□ -0.67
HMGB1P46-201ENST00000520062 DPYSL4O14531 572 aa10.83□□□□□ -0.68
HMGB1P46-201ENST00000520062 GPIHBP1Q8IV16 184 aa10.83□□□□□ -0.68
HMGB1P46-201ENST00000520062 IRX5P78411 483 aaPredicted RBP10.82□□□□□ -0.68
HMGB1P46-201ENST00000520062 OCEL1Q9H607 264 aa10.82□□□□□ -0.68
HMGB1P46-201ENST00000520062 ATN1P54259 1190 aaPredicted RBP10.81□□□□□ -0.68
HMGB1P46-201ENST00000520062 RBM26Q5T8P6 1007 aaKnown RBP10.81□□□□□ -0.68
HMGB1P46-201ENST00000520062 ASTLQ6HA08 431 aaPredicted RBP10.81□□□□□ -0.68
HMGB1P46-201ENST00000520062 BOLA1Q9Y3E2 137 aa10.8□□□□□ -0.68
HMGB1P46-201ENST00000520062 HAX1O00165 279 aa10.79□□□□□ -0.68
HMGB1P46-201ENST00000520062 ATMINO43313 823 aaPredicted RBP10.79□□□□□ -0.68
HMGB1P46-201ENST00000520062 AK7Q96M32 723 aa10.79□□□□□ -0.68
HMGB1P46-201ENST00000520062 G3V3G9 751 aa10.78□□□□□ -0.68
HMGB1P46-201ENST00000520062 KIF3CO14782 793 aa10.78□□□□□ -0.68
HMGB1P46-201ENST00000520062 PLPP6Q8IY26 295 aa10.77□□□□□ -0.69
HMGB1P46-201ENST00000520062 DAXXQ9UER7 740 aaPredicted RBP10.77□□□□□ -0.69
HMGB1P46-201ENST00000520062 C2orf72A6NCS6 295 aa10.75□□□□□ -0.69
HMGB1P46-201ENST00000520062 L3MBTL3Q96JM7 780 aaPredicted RBP10.74□□□□□ -0.69
HMGB1P46-201ENST00000520062 PLCG2P16885 1265 aa10.73□□□□□ -0.69
HMGB1P46-201ENST00000520062 KRI1Q8N9T8 703 aaKnown RBP10.73□□□□□ -0.69
HMGB1P46-201ENST00000520062 EVX2Q03828 476 aa10.72□□□□□ -0.69
HMGB1P46-201ENST00000520062 MAP3K9P80192 1104 aa10.7□□□□□ -0.7
HMGB1P46-201ENST00000520062 C14orf37Q86TY3 774 aa10.7□□□□□ -0.7
HMGB1P46-201ENST00000520062 GPR37O15354 613 aa10.68□□□□□ -0.7
HMGB1P46-201ENST00000520062 TRIM66O15016 1216 aa10.66□□□□□ -0.7
HMGB1P46-201ENST00000520062 PTGER2P43116 358 aa10.66□□□□□ -0.7
HMGB1P46-201ENST00000520062 OXER1Q8TDS5 423 aa10.66□□□□□ -0.7
HMGB1P46-201ENST00000520062 MINK1Q8N4C8 1332 aaPredicted RBP10.63□□□□□ -0.71
HMGB1P46-201ENST00000520062 GRXCR2A6NFK2 248 aa10.63□□□□□ -0.71
HMGB1P46-201ENST00000520062 PDE4DQ08499 809 aa10.63□□□□□ -0.71
HMGB1P46-201ENST00000520062 SEC24BO95487 1268 aa10.62□□□□□ -0.71
HMGB1P46-201ENST00000520062 OSBPP22059 807 aa10.62□□□□□ -0.71
HMGB1P46-201ENST00000520062 TMEM92Q6UXU6 159 aa10.62□□□□□ -0.71
HMGB1P46-201ENST00000520062 KDM4CQ9H3R0 1056 aa10.62□□□□□ -0.71
HMGB1P46-201ENST00000520062 GPBP1L1Q9HC44 474 aaPredicted RBP10.62□□□□□ -0.71
HMGB1P46-201ENST00000520062 TBC1D12O60347 775 aa10.61□□□□□ -0.71
HMGB1P46-201ENST00000520062 MAP2K5Q13163 448 aa10.61□□□□□ -0.71
HMGB1P46-201ENST00000520062 GABBR2O75899 941 aa10.6□□□□□ -0.71
HMGB1P46-201ENST00000520062 UPF1Q92900 1129 aaKnown RBP eCLIP10.6□□□□□ -0.71
HMGB1P46-201ENST00000520062 NUTM2FA1L443 756 aa10.59□□□□□ -0.71
HMGB1P46-201ENST00000520062 SLC39A7Q92504 469 aa10.59□□□□□ -0.71
HMGB1P46-201ENST00000520062 ZNF316A6NFI3 1004 aaPredicted RBP10.58□□□□□ -0.72
HMGB1P46-201ENST00000520062 FCHSD2O94868 740 aa10.58□□□□□ -0.72
HMGB1P46-201ENST00000520062 DCBLD2Q96PD2 775 aa10.58□□□□□ -0.72
HMGB1P46-201ENST00000520062 COLQQ9Y215 455 aaPredicted RBP10.58□□□□□ -0.72
HMGB1P46-201ENST00000520062 GNPATO15228 680 aa10.57□□□□□ -0.72
HMGB1P46-201ENST00000520062 HIC1Q14526 733 aa10.57□□□□□ -0.72
HMGB1P46-201ENST00000520062 IRF6O14896 467 aa10.56□□□□□ -0.72
HMGB1P46-201ENST00000520062 C7P10643 843 aa10.56□□□□□ -0.72
HMGB1P46-201ENST00000520062 PELP1Q8IZL8 1130 aaKnown RBP10.56□□□□□ -0.72
HMGB1P46-201ENST00000520062 PTCD2Q8WV60 388 aaKnown RBP10.56□□□□□ -0.72
HMGB1P46-201ENST00000520062 EVI5O60447 810 aa10.55□□□□□ -0.72
HMGB1P46-201ENST00000520062 CCDC102AQ96A19 550 aa10.55□□□□□ -0.72
HMGB1P46-201ENST00000520062 SLC34A2O95436 690 aa10.54□□□□□ -0.72
HMGB1P46-201ENST00000520062 AMHR2Q16671 573 aa10.54□□□□□ -0.72
HMGB1P46-201ENST00000520062 IL27Q8NEV9 243 aa10.54□□□□□ -0.72
HMGB1P46-201ENST00000520062 DDX12PQ92771 950 aa10.54□□□□□ -0.72
HMGB1P46-201ENST00000520062 C3orf67Q6ZVT6 689 aa10.52□□□□□ -0.73
HMGB1P46-201ENST00000520062 ARXQ96QS3 562 aa10.52□□□□□ -0.73
HMGB1P46-201ENST00000520062 ANO8Q9HCE9 1232 aaPredicted RBP10.51□□□□□ -0.73
HMGB1P46-201ENST00000520062 POTEFA5A3E0 1075 aa10.5□□□□□ -0.73
HMGB1P46-201ENST00000520062 PTGDRQ13258 359 aa10.5□□□□□ -0.73
HMGB1P46-201ENST00000520062 DDRGK1Q96HY6 314 aa10.49□□□□□ -0.73
HMGB1P46-201ENST00000520062 METRNQ9UJH8 293 aa10.48□□□□□ -0.73
HMGB1P46-201ENST00000520062 PRIM1P49642 420 aaKnown RBP10.47□□□□□ -0.73
HMGB1P46-201ENST00000520062 PARP9Q8IXQ6 854 aa10.47□□□□□ -0.73
HMGB1P46-201ENST00000520062 EPAS1Q99814 870 aa10.47□□□□□ -0.73
HMGB1P46-201ENST00000520062 FAM117AQ9C073 453 aa10.46□□□□□ -0.73
HMGB1P46-201ENST00000520062 PHF14O94880 888 aa10.45□□□□□ -0.74
HMGB1P46-201ENST00000520062 FECHP22830 423 aa10.45□□□□□ -0.74
HMGB1P46-201ENST00000520062 EN1Q05925 392 aaPredicted RBP10.44□□□□□ -0.74
HMGB1P46-201ENST00000520062 PLEKHG3A1L390 1219 aa10.42□□□□□ -0.74
HMGB1P46-201ENST00000520062 GOPCQ9HD26 462 aa10.41□□□□□ -0.74
HMGB1P46-201ENST00000520062 TTLL12Q14166 644 aaPredicted RBP10.4□□□□□ -0.74
HMGB1P46-201ENST00000520062 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.4□□□□□ -0.74
HMGB1P46-201ENST00000520062 NPDC1Q9NQX5 325 aaPredicted RBP10.39□□□□□ -0.75
HMGB1P46-201ENST00000520062 MAP3K7O43318 606 aa10.38□□□□□ -0.75
HMGB1P46-201ENST00000520062 TYW1BQ6NUM6 668 aa10.38□□□□□ -0.75
HMGB1P46-201ENST00000520062 SLAIN1Q8ND83 568 aa10.38□□□□□ -0.75
HMGB1P46-201ENST00000520062 FBXW7Q969H0 707 aa10.38□□□□□ -0.75
HMGB1P46-201ENST00000520062 PCDHGA4Q9Y5G9 962 aa10.37□□□□□ -0.75
HMGB1P46-201ENST00000520062 PCDHGA10Q9Y5H3 936 aa10.37□□□□□ -0.75
HMGB1P46-201ENST00000520062 POTEIP0CG38 1075 aa10.36□□□□□ -0.75
HMGB1P46-201ENST00000520062 GIGYF2Q6Y7W6 1299 aaKnown RBP10.36□□□□□ -0.75
HMGB1P46-201ENST00000520062 JPH4Q96JJ6 628 aa10.36□□□□□ -0.75
HMGB1P46-201ENST00000520062 CDHR5Q9HBB8 845 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 246 ms