RNA–Protein interactions for RNA: ENST00000519632.5

SHPRH-207, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 5,245 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-207ENST00000519632 SOGA1O94964 1423 aa15.51■□□□□ 0.07
SHPRH-207ENST00000519632 PAK3O75914 559 aaPredicted RBP15.5■□□□□ 0.07
SHPRH-207ENST00000519632 CDCA8Q53HL2 280 aa15.5■□□□□ 0.07
SHPRH-207ENST00000519632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.5■□□□□ 0.071e-6■■□□□ 11.9
SHPRH-207ENST00000519632 NRDCO43847 1150 aa15.5■□□□□ 0.07
SHPRH-207ENST00000519632 UBE2Q2Q8WVN8 375 aa15.5■□□□□ 0.07
SHPRH-207ENST00000519632 CHMP7Q8WUX9 453 aaPredicted RBP15.5■□□□□ 0.07
SHPRH-207ENST00000519632 CFAP53Q96M91 514 aa15.49■□□□□ 0.07
SHPRH-207ENST00000519632 MSH5O43196 834 aa15.49■□□□□ 0.07
SHPRH-207ENST00000519632 PDE3BQ13370 1112 aa15.48■□□□□ 0.07
SHPRH-207ENST00000519632 CHMP4BQ9H444 224 aaKnown RBP15.48■□□□□ 0.07
SHPRH-207ENST00000519632 FAM13BQ9NYF5 915 aa15.47■□□□□ 0.07
SHPRH-207ENST00000519632 DRC7Q8IY82 874 aa15.47■□□□□ 0.07
SHPRH-207ENST00000519632 KIF27Q86VH2 1401 aa15.46■□□□□ 0.07
SHPRH-207ENST00000519632 KANK4Q5T7N3 995 aaPredicted RBP15.46■□□□□ 0.07
SHPRH-207ENST00000519632 EXOC6Q8TAG9 804 aa15.46■□□□□ 0.07
SHPRH-207ENST00000519632 BAZ1BQ9UIG0 1483 aaKnown RBP15.46■□□□□ 0.07
SHPRH-207ENST00000519632 CALD1Q05682 793 aaKnown RBP15.46■□□□□ 0.07
SHPRH-207ENST00000519632 RALBP1Q15311 655 aa15.45■□□□□ 0.06
SHPRH-207ENST00000519632 CENPQQ7L2Z9 268 aaPredicted RBP15.45■□□□□ 0.06
SHPRH-207ENST00000519632 RRP1P56182 461 aaKnown RBP15.44■□□□□ 0.06
SHPRH-207ENST00000519632 MFAP1P55081 439 aaKnown RBP15.44■□□□□ 0.06
SHPRH-207ENST00000519632 RWDD1Q9H446 243 aaPredicted RBP15.44■□□□□ 0.06
SHPRH-207ENST00000519632 KTN1Q86UP2 1357 aaKnown RBP15.44■□□□□ 0.06
SHPRH-207ENST00000519632 SYAP1Q96A49 352 aaPredicted RBP15.44■□□□□ 0.06
SHPRH-207ENST00000519632 RGL3Q3MIN7 710 aa15.43■□□□□ 0.06
SHPRH-207ENST00000519632 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.43■□□□□ 0.06
SHPRH-207ENST00000519632 CFAP44Q96MT7 982 aa15.43■□□□□ 0.06
SHPRH-207ENST00000519632 SKOR2Q2VWA4 1001 aaPredicted RBP15.42■□□□□ 0.06
SHPRH-207ENST00000519632 PMFBP1Q8TBY8 1022 aa15.42■□□□□ 0.06
SHPRH-207ENST00000519632 MAP7D2Q96T17 732 aa15.41■□□□□ 0.06
SHPRH-207ENST00000519632 GOLGA6L4A6NEF3 574 aa15.4■□□□□ 0.06
SHPRH-207ENST00000519632 TPM2P07951 284 aa15.4■□□□□ 0.06
SHPRH-207ENST00000519632 BAZ1AQ9NRL2 1556 aaPredicted RBP15.4■□□□□ 0.06
SHPRH-207ENST00000519632 PRKRIP1Q9H875 184 aaPredicted RBP15.39■□□□□ 0.05
SHPRH-207ENST00000519632 RRP9O43818 475 aaKnown RBP15.39■□□□□ 0.05
SHPRH-207ENST00000519632 ZNF771Q7L3S4 317 aaPredicted RBP15.39■□□□□ 0.05
SHPRH-207ENST00000519632 PLEKHD1A6NEE1 506 aa15.38■□□□□ 0.05
SHPRH-207ENST00000519632 MAPK8IP3Q9UPT6 1336 aa15.37■□□□□ 0.05
SHPRH-207ENST00000519632 CSPP1Q1MSJ5 1256 aa15.37■□□□□ 0.05
SHPRH-207ENST00000519632 MTERF4Q7Z6M4 381 aaKnown RBP15.37■□□□□ 0.05
SHPRH-207ENST00000519632 MCCP23508 829 aa15.36■□□□□ 0.05
SHPRH-207ENST00000519632 MRE11P49959 708 aa15.35■□□□□ 0.05
SHPRH-207ENST00000519632 DDX49Q9Y6V7 483 aaKnown RBP15.35■□□□□ 0.05
SHPRH-207ENST00000519632 TMF1P82094 1093 aa15.35■□□□□ 0.05
SHPRH-207ENST00000519632 CRBNQ96SW2 442 aa15.34■□□□□ 0.05
SHPRH-207ENST00000519632 FHAD1B1AJZ9 1412 aa15.34■□□□□ 0.05
SHPRH-207ENST00000519632 FOXD4L1Q9NU39 408 aa15.34■□□□□ 0.05
SHPRH-207ENST00000519632 GOLGA2Q08379 1002 aa15.32■□□□□ 0.04
SHPRH-207ENST00000519632 PLIN1O60240 522 aa15.32■□□□□ 0.04
SHPRH-207ENST00000519632 CHMP5Q9NZZ3 219 aa15.32■□□□□ 0.04
SHPRH-207ENST00000519632 NLRP13Q86W25 1043 aa15.32■□□□□ 0.04
SHPRH-207ENST00000519632 FRAT2O75474 233 aaPredicted RBP15.31■□□□□ 0.04
SHPRH-207ENST00000519632 ARHGAP35Q9NRY4 1499 aa15.31■□□□□ 0.04
SHPRH-207ENST00000519632 PHF14O94880 888 aa15.3■□□□□ 0.04
SHPRH-207ENST00000519632 CFDP1Q9UEE9 299 aaPredicted RBP15.3■□□□□ 0.04
SHPRH-207ENST00000519632 CCDC88BA6NC98 1476 aa15.29■□□□□ 0.04
SHPRH-207ENST00000519632 DCAF11Q8TEB1 546 aa15.29■□□□□ 0.04
SHPRH-207ENST00000519632 R3HCC1Q9Y3T6 440 aaKnown RBP15.29■□□□□ 0.04
SHPRH-207ENST00000519632 ROCK2O75116 1388 aaKnown RBP15.27■□□□□ 0.04
SHPRH-207ENST00000519632 PHLDB1Q86UU1 1377 aa15.27■□□□□ 0.03
SHPRH-207ENST00000519632 MYBBP1AQ9BQG0 1328 aaKnown RBP15.26■□□□□ 0.03
SHPRH-207ENST00000519632 ITPRIPQ8IWB1 547 aa15.26■□□□□ 0.03
SHPRH-207ENST00000519632 L3MBTL2Q969R5 705 aa15.26■□□□□ 0.03
SHPRH-207ENST00000519632 IPO8O15397 1037 aaKnown RBP15.26■□□□□ 0.03
SHPRH-207ENST00000519632 CECR2Q9BXF3 1484 aa15.25■□□□□ 0.03
SHPRH-207ENST00000519632 FOXD1Q16676 465 aa15.25■□□□□ 0.03
SHPRH-207ENST00000519632 KIF15Q9NS87 1388 aa15.24■□□□□ 0.03
SHPRH-207ENST00000519632 CENPJQ9HC77 1338 aaPredicted RBP15.24■□□□□ 0.03
SHPRH-207ENST00000519632 MPHOSPH9Q99550 1183 aa15.24■□□□□ 0.03
SHPRH-207ENST00000519632 ABCC8Q09428 1581 aa15.23■□□□□ 0.03
SHPRH-207ENST00000519632 KCNJ4P48050 445 aa15.22■□□□□ 0.03
SHPRH-207ENST00000519632 RBM10P98175 930 aaKnown RBP15.22■□□□□ 0.03
SHPRH-207ENST00000519632 FMN1Q68DA7 1419 aa15.22■□□□□ 0.03
SHPRH-207ENST00000519632 BACH2Q9BYV9 841 aa15.22■□□□□ 0.03
SHPRH-207ENST00000519632 U2SURPO15042 1029 aaKnown RBP15.22■□□□□ 0.03
SHPRH-207ENST00000519632 ZMYND15Q9H091 742 aa15.21■□□□□ 0.03
SHPRH-207ENST00000519632 TRAK2O60296 914 aa15.21■□□□□ 0.02
SHPRH-207ENST00000519632 NASPP49321 788 aaPredicted RBP15.2■□□□□ 0.02
SHPRH-207ENST00000519632 FGD1P98174 961 aa15.2■□□□□ 0.02
SHPRH-207ENST00000519632 ST18O60284 1047 aa15.2■□□□□ 0.02
SHPRH-207ENST00000519632 GOLGA6L1Q8N7Z2 621 aa15.2■□□□□ 0.02
SHPRH-207ENST00000519632 CLUAP1Q96AJ1 413 aa15.19■□□□□ 0.02
SHPRH-207ENST00000519632 CGNL1Q0VF96 1302 aa15.19■□□□□ 0.02
SHPRH-207ENST00000519632 HTATSF1O43719 755 aaKnown RBP15.18■□□□□ 0.02
SHPRH-207ENST00000519632 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
SHPRH-207ENST00000519632 CARMIL1Q5VZK9 1371 aa15.18■□□□□ 0.02
SHPRH-207ENST00000519632 MORC1Q86VD1 984 aa15.16■□□□□ 0.02
SHPRH-207ENST00000519632 CCDC173Q0VFZ6 552 aa15.16■□□□□ 0.02
SHPRH-207ENST00000519632 FOXD4L5Q5VV16 416 aaPredicted RBP15.16■□□□□ 0.02
SHPRH-207ENST00000519632 FOXD4L4Q8WXT5 416 aaPredicted RBP15.16■□□□□ 0.02
SHPRH-207ENST00000519632 KIF16BQ96L93 1317 aa15.16■□□□□ 0.02
SHPRH-207ENST00000519632 CCDC39Q9UFE4 941 aa15.16■□□□□ 0.02
SHPRH-207ENST00000519632 ESPNB1AK53 854 aa15.15■□□□□ 0.02
SHPRH-207ENST00000519632 KIAA1211Q6ZU35 1233 aa15.15■□□□□ 0.02
SHPRH-207ENST00000519632 CNTLNQ9NXG0 1405 aa15.15■□□□□ 0.02
SHPRH-207ENST00000519632 APBB1O00213 710 aa15.14■□□□□ 0.01
SHPRH-207ENST00000519632 ISY1Q9ULR0 285 aaKnown RBP15.14■□□□□ 0.01
SHPRH-207ENST00000519632 CCDC66A2RUB6 948 aa15.14■□□□□ 0.01
SHPRH-207ENST00000519632 SMC4Q9NTJ3 1288 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms