RNA–Protein interactions for RNA: ENST00000519599.1

IGKV3D-25-201, Transcript of immunoglobulin kappa variable 3D-25 (pseudogene), humanhuman

BASIC

Gene IGKV3D-25, Length 235 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-25-201ENST00000519599 KDM5CP41229 1560 aa10.18□□□□□ -0.78
IGKV3D-25-201ENST00000519599 YEATS2Q9ULM3 1422 aa10.18□□□□□ -0.78
IGKV3D-25-201ENST00000519599 ITSN2Q9NZM3 1697 aa10.18□□□□□ -0.78
IGKV3D-25-201ENST00000519599 POGZQ7Z3K3 1410 aa10.17□□□□□ -0.78
IGKV3D-25-201ENST00000519599 RIMS1Q86UR5 1692 aaKnown RBP10.17□□□□□ -0.78
IGKV3D-25-201ENST00000519599 FYCO1Q9BQS8 1478 aa10.17□□□□□ -0.78
IGKV3D-25-201ENST00000519599 ZFYVE16Q7Z3T8 1539 aa10.16□□□□□ -0.78
IGKV3D-25-201ENST00000519599 ARHGEF12Q9NZN5 1544 aa10.16□□□□□ -0.78
IGKV3D-25-201ENST00000519599 PTPRMP28827 1452 aa10.16□□□□□ -0.78
IGKV3D-25-201ENST00000519599 CCDC18Q5T9S5 1454 aa10.16□□□□□ -0.78
IGKV3D-25-201ENST00000519599 ABCC1P33527 1531 aa10.15□□□□□ -0.78
IGKV3D-25-201ENST00000519599 CLIP1P30622 1438 aa10.15□□□□□ -0.79
IGKV3D-25-201ENST00000519599 SCAPERQ9BY12 1400 aa10.15□□□□□ -0.79
IGKV3D-25-201ENST00000519599 ABCA6Q8N139 1617 aa10.15□□□□□ -0.79
IGKV3D-25-201ENST00000519599 FER1L4A9Z1Z3 1794 aa10.14□□□□□ -0.79
IGKV3D-25-201ENST00000519599 MAGI2Q86UL8 1455 aa10.14□□□□□ -0.79
IGKV3D-25-201ENST00000519599 KIDINS220Q9ULH0 1771 aa10.14□□□□□ -0.79
IGKV3D-25-201ENST00000519599 SAMD9LQ8IVG5 1584 aa10.14□□□□□ -0.79
IGKV3D-25-201ENST00000519599 DIP2CQ9Y2E4 1556 aa10.14□□□□□ -0.79
IGKV3D-25-201ENST00000519599 ARHGAP5Q13017 1502 aa10.12□□□□□ -0.79
IGKV3D-25-201ENST00000519599 REREQ9P2R6 1566 aa10.11□□□□□ -0.79
IGKV3D-25-201ENST00000519599 TRAPPC8Q9Y2L5 1435 aa10.09□□□□□ -0.79
IGKV3D-25-201ENST00000519599 GPATCH8Q9UKJ3 1502 aaKnown RBP10.09□□□□□ -0.79
IGKV3D-25-201ENST00000519599 ATP1B4Q9UN42 357 aaPredicted RBP10.09□□□□□ -0.79
IGKV3D-25-201ENST00000519599 ZNF518AQ6AHZ1 1483 aa10.09□□□□□ -0.79
IGKV3D-25-201ENST00000519599 LMTK3Q96Q04 1460 aa10.09□□□□□ -0.79
IGKV3D-25-201ENST00000519599 ATP10AO60312 1499 aa10.08□□□□□ -0.8
IGKV3D-25-201ENST00000519599 MLH3Q9UHC1 1453 aa10.08□□□□□ -0.8
IGKV3D-25-201ENST00000519599 TIAM1Q13009 1591 aa10.08□□□□□ -0.8
IGKV3D-25-201ENST00000519599 CEP162Q5TB80 1403 aa10.07□□□□□ -0.8
IGKV3D-25-201ENST00000519599 EFCAB2Q5VUJ9 269 aa10.07□□□□□ -0.8
IGKV3D-25-201ENST00000519599 CDK11AQ9UQ88 783 aaPredicted RBP10.07□□□□□ -0.8
IGKV3D-25-201ENST00000519599 C9orf84Q5VXU9 1444 aa10.07□□□□□ -0.8
IGKV3D-25-201ENST00000519599 INO80Q9ULG1 1556 aaPredicted RBP10.06□□□□□ -0.8
IGKV3D-25-201ENST00000519599 AFAP1Q8N556 730 aa10.06□□□□□ -0.8
IGKV3D-25-201ENST00000519599 SYCP2Q9BX26 1530 aa10.06□□□□□ -0.8
IGKV3D-25-201ENST00000519599 C3P01024 1663 aa10.06□□□□□ -0.8
IGKV3D-25-201ENST00000519599 EHBP1L1Q8N3D4 1523 aa10.05□□□□□ -0.8
IGKV3D-25-201ENST00000519599 AGLP35573 1532 aa10.04□□□□□ -0.8
IGKV3D-25-201ENST00000519599 PLXNC1O60486 1568 aa10.04□□□□□ -0.8
IGKV3D-25-201ENST00000519599 PREX1Q8TCU6 1659 aa10.03□□□□□ -0.8
IGKV3D-25-201ENST00000519599 ADGBQ8N7X0 1667 aa10.02□□□□□ -0.8
IGKV3D-25-201ENST00000519599 SUPT6HQ7KZ85 1726 aaKnown RBP10.02□□□□□ -0.8
IGKV3D-25-201ENST00000519599 STRCQ7RTU9 1775 aa10.01□□□□□ -0.81
IGKV3D-25-201ENST00000519599 SETD1BQ9UPS6 1966 aaKnown RBP10.01□□□□□ -0.81
IGKV3D-25-201ENST00000519599 MBD5Q9P267 1494 aa10.01□□□□□ -0.81
IGKV3D-25-201ENST00000519599 ARID4BQ4LE39 1312 aaPredicted RBP10.01□□□□□ -0.81
IGKV3D-25-201ENST00000519599 ATP7AQ04656 1500 aa10□□□□□ -0.81
IGKV3D-25-201ENST00000519599 MROH2AA6NES4 1674 aa9.99□□□□□ -0.81
IGKV3D-25-201ENST00000519599 KIAA1107Q9UPP5 1409 aa9.99□□□□□ -0.81
IGKV3D-25-201ENST00000519599 LOC105371045A0A1W2PR82 267 aa9.99□□□□□ -0.81
IGKV3D-25-201ENST00000519599 NCOA2Q15596 1464 aa9.98□□□□□ -0.81
IGKV3D-25-201ENST00000519599 VPS8Q8N3P4 1428 aa9.98□□□□□ -0.81
IGKV3D-25-201ENST00000519599 CLTCQ00610 1675 aaKnown RBP9.97□□□□□ -0.81
IGKV3D-25-201ENST00000519599 MLECQ14165 292 aa9.97□□□□□ -0.81
IGKV3D-25-201ENST00000519599 ZNF644Q9H582 1327 aaPredicted RBP9.97□□□□□ -0.81
IGKV3D-25-201ENST00000519599 MTUS2Q5JR59 1369 aa9.97□□□□□ -0.81
IGKV3D-25-201ENST00000519599 HNRNPMP52272 730 aaKnown RBP eCLIP9.96□□□□□ -0.82
IGKV3D-25-201ENST00000519599 PLEKHH2Q8IVE3 1493 aa9.96□□□□□ -0.82
IGKV3D-25-201ENST00000519599 CEBPAP49715 358 aaPredicted RBP9.95□□□□□ -0.82
IGKV3D-25-201ENST00000519599 CCNB3Q8WWL7 1395 aa9.95□□□□□ -0.82
IGKV3D-25-201ENST00000519599 LRRC9Q6ZRR7 1453 aa9.95□□□□□ -0.82
IGKV3D-25-201ENST00000519599 MAP3K1Q13233 1512 aa9.95□□□□□ -0.82
IGKV3D-25-201ENST00000519599 ARHGEF5Q12774 1597 aa9.94□□□□□ -0.82
IGKV3D-25-201ENST00000519599 CAMSAP2Q08AD1 1489 aa9.94□□□□□ -0.82
IGKV3D-25-201ENST00000519599 ILDR1Q86SU0 546 aaPredicted RBP9.94□□□□□ -0.82
IGKV3D-25-201ENST00000519599 A2MP01023 1474 aa9.93□□□□□ -0.82
IGKV3D-25-201ENST00000519599 HSPA2P54652 639 aa9.93□□□□□ -0.82
IGKV3D-25-201ENST00000519599 ZNF777Q9ULD5 760 aaPredicted RBP9.93□□□□□ -0.82
IGKV3D-25-201ENST00000519599 CFDP1Q9UEE9 299 aaPredicted RBP9.92□□□□□ -0.82
IGKV3D-25-201ENST00000519599 ZNF142P52746 1687 aaPredicted RBP9.92□□□□□ -0.82
IGKV3D-25-201ENST00000519599 SPAG9O60271 1321 aaKnown RBP9.91□□□□□ -0.82
IGKV3D-25-201ENST00000519599 KANK4Q5T7N3 995 aaPredicted RBP9.91□□□□□ -0.82
IGKV3D-25-201ENST00000519599 MYO3AQ8NEV4 1616 aa9.91□□□□□ -0.82
IGKV3D-25-201ENST00000519599 MAST1Q9Y2H9 1570 aa9.91□□□□□ -0.82
IGKV3D-25-201ENST00000519599 RTEL1-TNFRSF6BF6WH68 1400 aa9.9□□□□□ -0.82
IGKV3D-25-201ENST00000519599 CROCC2H7BZ55 1655 aa9.9□□□□□ -0.82
IGKV3D-25-201ENST00000519599 PLPPR3Q6T4P5 718 aa9.9□□□□□ -0.82
IGKV3D-25-201ENST00000519599 CCDC141Q6ZP82 1450 aa9.9□□□□□ -0.83
IGKV3D-25-201ENST00000519599 MROH1Q8NDA8 1641 aa9.89□□□□□ -0.83
IGKV3D-25-201ENST00000519599 CNTLNQ9NXG0 1405 aa9.89□□□□□ -0.83
IGKV3D-25-201ENST00000519599 RNF17Q9BXT8 1623 aaKnown RBP9.88□□□□□ -0.83
IGKV3D-25-201ENST00000519599 PTPRKQ15262 1439 aa9.87□□□□□ -0.83
IGKV3D-25-201ENST00000519599 NPATQ14207 1427 aa9.86□□□□□ -0.83
IGKV3D-25-201ENST00000519599 UHRF1BP1Q6BDS2 1440 aa9.86□□□□□ -0.83
IGKV3D-25-201ENST00000519599 MYT1LQ9UL68 1186 aa9.86□□□□□ -0.83
IGKV3D-25-201ENST00000519599 ZMYM3Q14202 1370 aa9.86□□□□□ -0.83
IGKV3D-25-201ENST00000519599 CEP152O94986 1710 aa9.85□□□□□ -0.83
IGKV3D-25-201ENST00000519599 CEP170BQ9Y4F5 1589 aaPredicted RBP9.85□□□□□ -0.83
IGKV3D-25-201ENST00000519599 MYOM3Q5VTT5 1437 aa9.85□□□□□ -0.83
IGKV3D-25-201ENST00000519599 DHX29Q7Z478 1369 aaKnown RBP9.85□□□□□ -0.83
IGKV3D-25-201ENST00000519599 PTPN23Q9H3S7 1636 aa9.85□□□□□ -0.83
IGKV3D-25-201ENST00000519599 EIF2AK4Q9P2K8 1649 aaKnown RBP9.85□□□□□ -0.83
IGKV3D-25-201ENST00000519599 NCOA1Q15788 1441 aa9.84□□□□□ -0.83
IGKV3D-25-201ENST00000519599 CAMSAP1Q5T5Y3 1602 aa9.84□□□□□ -0.83
IGKV3D-25-201ENST00000519599 LTBP4Q8N2S1 1624 aa9.84□□□□□ -0.83
IGKV3D-25-201ENST00000519599 CFAP65Q6ZU64 1925 aaKnown RBP9.84□□□□□ -0.83
IGKV3D-25-201ENST00000519599 MIA2Q96PC5 1412 aa9.83□□□□□ -0.84
IGKV3D-25-201ENST00000519599 FAM135AQ9P2D6 1515 aa9.83□□□□□ -0.84
IGKV3D-25-201ENST00000519599 DNMT1P26358 1616 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms