RNA–Protein interactions for RNA: ENST00000519589.1

KCNQ3-203, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 2

Gene KCNQ3, Length 3,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-203ENST00000519589 IRX6P78412 446 aaPredicted RBP11.66□□□□□ -0.54
KCNQ3-203ENST00000519589 DDX10Q13206 875 aaKnown RBP11.65□□□□□ -0.54
KCNQ3-203ENST00000519589 RAPGEF3O95398 923 aa11.64□□□□□ -0.55
KCNQ3-203ENST00000519589 DAXXQ9UER7 740 aaPredicted RBP11.62□□□□□ -0.55
KCNQ3-203ENST00000519589 MTUS2Q5JR59 1369 aa11.62□□□□□ -0.55
KCNQ3-203ENST00000519589 UACAQ9BZF9 1416 aa11.62□□□□□ -0.55
KCNQ3-203ENST00000519589 BRPF3Q9ULD4 1205 aa11.62□□□□□ -0.55
KCNQ3-203ENST00000519589 IQGAP2Q13576 1575 aa11.61□□□□□ -0.55
KCNQ3-203ENST00000519589 SENP3Q9H4L4 574 aaPredicted RBP11.61□□□□□ -0.55
KCNQ3-203ENST00000519589 ESF1Q9H501 851 aaKnown RBP11.61□□□□□ -0.55
KCNQ3-203ENST00000519589 CHIC2Q9UKJ5 165 aa11.61□□□□□ -0.55
KCNQ3-203ENST00000519589 USP35Q9P2H5 1018 aa11.6□□□□□ -0.55
KCNQ3-203ENST00000519589 RTL5Q5HYW3 569 aaPredicted RBP11.59□□□□□ -0.55
KCNQ3-203ENST00000519589 B4GALNT3Q6L9W6 998 aa11.57□□□□□ -0.56
KCNQ3-203ENST00000519589 CUL7Q14999 1698 aa11.57□□□□□ -0.56
KCNQ3-203ENST00000519589 ZMYND15Q9H091 742 aa11.56□□□□□ -0.56
KCNQ3-203ENST00000519589 RSPH6AQ9H0K4 717 aa11.56□□□□□ -0.56
KCNQ3-203ENST00000519589 ASXL2Q76L83 1435 aa11.56□□□□□ -0.56
KCNQ3-203ENST00000519589 HIRIP3Q9BW71 556 aaPredicted RBP11.56□□□□□ -0.56
KCNQ3-203ENST00000519589 PODXL2Q9NZ53 605 aa11.56□□□□□ -0.56
KCNQ3-203ENST00000519589 CFDP1Q9UEE9 299 aaPredicted RBP11.56□□□□□ -0.56
KCNQ3-203ENST00000519589 CCNB3Q8WWL7 1395 aa11.54□□□□□ -0.56
KCNQ3-203ENST00000519589 CLASP1Q7Z460 1538 aa11.54□□□□□ -0.56
KCNQ3-203ENST00000519589 ZBTB47Q9UFB7 747 aaPredicted RBP11.53□□□□□ -0.56
KCNQ3-203ENST00000519589 TIMELESSQ9UNS1 1208 aa11.53□□□□□ -0.56
KCNQ3-203ENST00000519589 FMN1Q68DA7 1419 aa11.52□□□□□ -0.56
KCNQ3-203ENST00000519589 ANP32CO43423 234 aa11.52□□□□□ -0.57
KCNQ3-203ENST00000519589 AFAP1Q8N556 730 aa11.52□□□□□ -0.57
KCNQ3-203ENST00000519589 HNRNPMP52272 730 aaKnown RBP eCLIP11.51□□□□□ -0.57
KCNQ3-203ENST00000519589 EFCAB2Q5VUJ9 269 aa11.51□□□□□ -0.57
KCNQ3-203ENST00000519589 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.51□□□□□ -0.57
KCNQ3-203ENST00000519589 SIN3AQ96ST3 1273 aa11.51□□□□□ -0.57
KCNQ3-203ENST00000519589 CD109Q6YHK3 1445 aa11.5□□□□□ -0.57
KCNQ3-203ENST00000519589 GGT6Q6P531 493 aa11.5□□□□□ -0.57
KCNQ3-203ENST00000519589 DISP1Q96F81 1524 aa11.5□□□□□ -0.57
KCNQ3-203ENST00000519589 RAB3GAP2Q9H2M9 1393 aa11.5□□□□□ -0.57
KCNQ3-203ENST00000519589 RNF123Q5XPI4 1314 aa11.5□□□□□ -0.57
KCNQ3-203ENST00000519589 ANP32AP39687 249 aaKnown RBP11.5□□□□□ -0.57
KCNQ3-203ENST00000519589 RRP7BPQ9NSQ0 103 aa11.5□□□□□ -0.57
KCNQ3-203ENST00000519589 HNRNPUQ00839 825 aaKnown RBP eCLIP11.49□□□□□ -0.57
KCNQ3-203ENST00000519589 FAM43AQ8N2R8 423 aa11.49□□□□□ -0.57
KCNQ3-203ENST00000519589 NEFMP07197 916 aa11.48□□□□□ -0.57
KCNQ3-203ENST00000519589 CDK13Q14004 1512 aaKnown RBP11.48□□□□□ -0.57
KCNQ3-203ENST00000519589 KDM5BQ9UGL1 1544 aa11.48□□□□□ -0.57
KCNQ3-203ENST00000519589 ZNF644Q9H582 1327 aaPredicted RBP11.47□□□□□ -0.57
KCNQ3-203ENST00000519589 CNGB1Q14028 1251 aaPredicted RBP11.47□□□□□ -0.57
KCNQ3-203ENST00000519589 GSE1Q14687 1217 aa11.47□□□□□ -0.57
KCNQ3-203ENST00000519589 PCF11O94913 1555 aaKnown RBP11.47□□□□□ -0.57
KCNQ3-203ENST00000519589 TSPOAP1O95153 1857 aa11.46□□□□□ -0.57
KCNQ3-203ENST00000519589 PHLDB1Q86UU1 1377 aa11.46□□□□□ -0.58
KCNQ3-203ENST00000519589 TSPY4P0CV99 314 aa11.45□□□□□ -0.58
KCNQ3-203ENST00000519589 TSPY10P0CW01 314 aa11.45□□□□□ -0.58
KCNQ3-203ENST00000519589 ABCC2Q92887 1545 aa11.45□□□□□ -0.58
KCNQ3-203ENST00000519589 CTTNBP2Q8WZ74 1663 aa11.44□□□□□ -0.58
KCNQ3-203ENST00000519589 TONSLQ96HA7 1378 aa11.44□□□□□ -0.58
KCNQ3-203ENST00000519589 NCOA2Q15596 1464 aa11.43□□□□□ -0.58
KCNQ3-203ENST00000519589 DCAF11Q8TEB1 546 aa11.43□□□□□ -0.58
KCNQ3-203ENST00000519589 CASKIN1Q8WXD9 1431 aa11.43□□□□□ -0.58
KCNQ3-203ENST00000519589 ATP10BO94823 1461 aa11.42□□□□□ -0.58
KCNQ3-203ENST00000519589 VSIG10Q8N0Z9 540 aa11.42□□□□□ -0.58
KCNQ3-203ENST00000519589 POLR3GLQ9BT43 218 aa11.42□□□□□ -0.58
KCNQ3-203ENST00000519589 LAS1LQ9Y4W2 734 aaKnown RBP11.42□□□□□ -0.58
KCNQ3-203ENST00000519589 ZBED9Q6R2W3 1325 aa11.41□□□□□ -0.58
KCNQ3-203ENST00000519589 LRRC9Q6ZRR7 1453 aa11.41□□□□□ -0.58
KCNQ3-203ENST00000519589 FRAT1Q92837 279 aaPredicted RBP11.41□□□□□ -0.58
KCNQ3-203ENST00000519589 KIAA0556O60303 1618 aa11.41□□□□□ -0.58
KCNQ3-203ENST00000519589 CCDC184Q52MB2 194 aa11.4□□□□□ -0.58
KCNQ3-203ENST00000519589 EFCAB5A4FU69 1503 aa11.4□□□□□ -0.58
KCNQ3-203ENST00000519589 CEBPAP49715 358 aaPredicted RBP11.4□□□□□ -0.59
KCNQ3-203ENST00000519589 SMG6Q86US8 1419 aaKnown RBP11.39□□□□□ -0.59
KCNQ3-203ENST00000519589 UGGT2Q9NYU1 1516 aa11.39□□□□□ -0.59
KCNQ3-203ENST00000519589 AKNAQ7Z591 1439 aa11.39□□□□□ -0.59
KCNQ3-203ENST00000519589 SETD5Q9C0A6 1442 aa11.39□□□□□ -0.59
KCNQ3-203ENST00000519589 PPM1GO15355 546 aaPredicted RBP11.39□□□□□ -0.59
KCNQ3-203ENST00000519589 WDR7Q9Y4E6 1490 aa11.38□□□□□ -0.59
KCNQ3-203ENST00000519589 GLIPR1L2Q4G1C9 344 aa11.38□□□□□ -0.59
KCNQ3-203ENST00000519589 CHGAP10645 457 aaKnown RBP11.38□□□□□ -0.59
KCNQ3-203ENST00000519589 RRAGDQ9NQL2 400 aaPredicted RBP11.37□□□□□ -0.59
KCNQ3-203ENST00000519589 FYCO1Q9BQS8 1478 aa11.37□□□□□ -0.59
KCNQ3-203ENST00000519589 SPAG9O60271 1321 aaKnown RBP11.37□□□□□ -0.59
KCNQ3-203ENST00000519589 EPRSP07814 1512 aaKnown RBP11.37□□□□□ -0.59
KCNQ3-203ENST00000519589 ABCC10Q5T3U5 1492 aa11.37□□□□□ -0.59
KCNQ3-203ENST00000519589 TIAM1Q13009 1591 aa11.36□□□□□ -0.59
KCNQ3-203ENST00000519589 KIF3BO15066 747 aa11.36□□□□□ -0.59
KCNQ3-203ENST00000519589 SCAPERQ9BY12 1400 aa11.36□□□□□ -0.59
KCNQ3-203ENST00000519589 POLR1AO95602 1720 aaPredicted RBP11.36□□□□□ -0.59
KCNQ3-203ENST00000519589 STAG3Q9UJ98 1225 aa11.35□□□□□ -0.59
KCNQ3-203ENST00000519589 NFKBIBQ15653 356 aa11.35□□□□□ -0.59
KCNQ3-203ENST00000519589 ADCY10Q96PN6 1610 aa11.35□□□□□ -0.59
KCNQ3-203ENST00000519589 NUP153P49790 1475 aaKnown RBP11.35□□□□□ -0.59
KCNQ3-203ENST00000519589 HSPA2P54652 639 aa11.34□□□□□ -0.59
KCNQ3-203ENST00000519589 BACH2Q9BYV9 841 aa11.33□□□□□ -0.6
KCNQ3-203ENST00000519589 RRP9O43818 475 aaKnown RBP11.33□□□□□ -0.6
KCNQ3-203ENST00000519589 FOXD1Q16676 465 aa11.33□□□□□ -0.6
KCNQ3-203ENST00000519589 SAMD9Q5K651 1589 aa11.31□□□□□ -0.6
KCNQ3-203ENST00000519589 ARHGAP5Q13017 1502 aa11.31□□□□□ -0.6
KCNQ3-203ENST00000519589 AAMPQ13685 434 aa11.31□□□□□ -0.6
KCNQ3-203ENST00000519589 CNTLNQ9NXG0 1405 aa11.3□□□□□ -0.6
KCNQ3-203ENST00000519589 ZNF326Q5BKZ1 582 aaKnown RBP11.3□□□□□ -0.6
KCNQ3-203ENST00000519589 PDE4AP27815 886 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms