RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 MYOM3Q5VTT5 1437 aa21.8■■□□□ 1.08
SDC2-203ENST00000519587 CD109Q6YHK3 1445 aa21.8■■□□□ 1.08
SDC2-203ENST00000519587 HECW2Q9P2P5 1572 aa21.8■■□□□ 1.08
SDC2-203ENST00000519587 CDC42BPBQ9Y5S2 1711 aa21.79■■□□□ 1.08
SDC2-203ENST00000519587 ARHGAP5Q13017 1502 aa21.79■■□□□ 1.08
SDC2-203ENST00000519587 GPATCH8Q9UKJ3 1502 aaKnown RBP21.79■■□□□ 1.08
SDC2-203ENST00000519587 PLCH2O75038 1416 aa21.78■■□□□ 1.08
SDC2-203ENST00000519587 TEX14Q8IWB6 1497 aa21.77■■□□□ 1.07
SDC2-203ENST00000519587 PHLDB1Q86UU1 1377 aa21.76■■□□□ 1.07
SDC2-203ENST00000519587 PPRC1Q5VV67 1664 aaKnown RBP21.75■■□□□ 1.07
SDC2-203ENST00000519587 MIA2Q96PC5 1412 aa21.74■■□□□ 1.07
SDC2-203ENST00000519587 FGD6Q6ZV73 1430 aa21.72■■□□□ 1.07
SDC2-203ENST00000519587 FANCAO15360 1455 aa21.72■■□□□ 1.07
SDC2-203ENST00000519587 CFDP1Q9UEE9 299 aaPredicted RBP21.72■■□□□ 1.07
SDC2-203ENST00000519587 NEO1Q92859 1461 aa21.71■■□□□ 1.07
SDC2-203ENST00000519587 PTPN23Q9H3S7 1636 aa21.7■■□□□ 1.06
SDC2-203ENST00000519587 EFCAB2Q5VUJ9 269 aa21.69■■□□□ 1.06
SDC2-203ENST00000519587 PLEKHH2Q8IVE3 1493 aa21.69■■□□□ 1.06
SDC2-203ENST00000519587 SAMD9LQ8IVG5 1584 aa21.67■■□□□ 1.06
SDC2-203ENST00000519587 CAMSAP2Q08AD1 1489 aa21.67■■□□□ 1.06
SDC2-203ENST00000519587 ABCC1P33527 1531 aa21.65■■□□□ 1.06
SDC2-203ENST00000519587 TCOF1Q13428 1488 aaKnown RBP21.64■■□□□ 1.06
SDC2-203ENST00000519587 RRBP1Q9P2E9 1410 aaKnown RBP21.64■■□□□ 1.06
SDC2-203ENST00000519587 ZNF777Q9ULD5 760 aaPredicted RBP21.62■■□□□ 1.05
SDC2-203ENST00000519587 AKNAQ7Z591 1439 aa21.62■■□□□ 1.05
SDC2-203ENST00000519587 SYCP2Q9BX26 1530 aa21.6■■□□□ 1.05
SDC2-203ENST00000519587 COL17A1Q9UMD9 1497 aaPredicted RBP21.6■■□□□ 1.05
SDC2-203ENST00000519587 KIAA1107Q9UPP5 1409 aa21.6■■□□□ 1.05
SDC2-203ENST00000519587 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.59■■□□□ 1.05
SDC2-203ENST00000519587 ARHGEF5Q12774 1597 aa21.58■■□□□ 1.05
SDC2-203ENST00000519587 FAM50AQ14320 339 aaKnown RBP21.57■■□□□ 1.04
SDC2-203ENST00000519587 DNMT1P26358 1616 aaKnown RBP21.56■■□□□ 1.04
SDC2-203ENST00000519587 CROCC2H7BZ55 1655 aa21.55■■□□□ 1.04
SDC2-203ENST00000519587 SCAPERQ9BY12 1400 aa21.55■■□□□ 1.04
SDC2-203ENST00000519587 CCDC141Q6ZP82 1450 aa21.54■■□□□ 1.04
SDC2-203ENST00000519587 ZNF644Q9H582 1327 aaPredicted RBP21.54■■□□□ 1.04
SDC2-203ENST00000519587 DENND4BO75064 1496 aaPredicted RBP21.53■■□□□ 1.04
SDC2-203ENST00000519587 ZNF518AQ6AHZ1 1483 aa21.53■■□□□ 1.04
SDC2-203ENST00000519587 POGZQ7Z3K3 1410 aa21.53■■□□□ 1.04
SDC2-203ENST00000519587 RICTORQ6R327 1708 aa21.52■■□□□ 1.04
SDC2-203ENST00000519587 FBXO41Q8TF61 875 aa21.51■■□□□ 1.03
SDC2-203ENST00000519587 MBD5Q9P267 1494 aa21.51■■□□□ 1.03
SDC2-203ENST00000519587 RSPH4AQ5TD94 716 aa21.5■■□□□ 1.03
SDC2-203ENST00000519587 ARHGEF12Q9NZN5 1544 aa21.5■■□□□ 1.03
SDC2-203ENST00000519587 SHANK2Q9UPX8 1470 aa21.49■■□□□ 1.03
SDC2-203ENST00000519587 DAPK1P53355 1430 aa21.48■■□□□ 1.03
SDC2-203ENST00000519587 KDM5CP41229 1560 aa21.48■■□□□ 1.03
SDC2-203ENST00000519587 FRMPD1Q5SYB0 1578 aa21.47■■□□□ 1.03
SDC2-203ENST00000519587 ADGBQ8N7X0 1667 aa21.47■■□□□ 1.03
SDC2-203ENST00000519587 ZMYM4Q5VZL5 1548 aa21.46■■□□□ 1.03
SDC2-203ENST00000519587 HNRNPMP52272 730 aaKnown RBP eCLIP21.46■■□□□ 1.034e-7■■□□□ 14.3
SDC2-203ENST00000519587 TRAPPC8Q9Y2L5 1435 aa21.46■■□□□ 1.03
SDC2-203ENST00000519587 MAST1Q9Y2H9 1570 aa21.45■■□□□ 1.02
SDC2-203ENST00000519587 ABCC5O15440 1437 aa21.44■■□□□ 1.02
SDC2-203ENST00000519587 INO80Q9ULG1 1556 aaPredicted RBP21.44■■□□□ 1.02
SDC2-203ENST00000519587 TRIM26Q12899 539 aaPredicted RBP21.42■■□□□ 1.02
SDC2-203ENST00000519587 C9orf84Q5VXU9 1444 aa21.42■■□□□ 1.02
SDC2-203ENST00000519587 ZFYVE16Q7Z3T8 1539 aa21.42■■□□□ 1.02
SDC2-203ENST00000519587 ATP7AQ04656 1500 aa21.41■■□□□ 1.02
SDC2-203ENST00000519587 TSPY4P0CV99 314 aa21.41■■□□□ 1.02
SDC2-203ENST00000519587 TSPY10P0CW01 314 aa21.41■■□□□ 1.02
SDC2-203ENST00000519587 PLXNC1O60486 1568 aa21.4■■□□□ 1.02
SDC2-203ENST00000519587 SPAG9O60271 1321 aaKnown RBP21.39■■□□□ 1.01
SDC2-203ENST00000519587 MAGI2Q86UL8 1455 aa21.39■■□□□ 1.01
SDC2-203ENST00000519587 MLH3Q9UHC1 1453 aa21.39■■□□□ 1.01
SDC2-203ENST00000519587 RTEL1-TNFRSF6BF6WH68 1400 aa21.38■■□□□ 1.01
SDC2-203ENST00000519587 RAPGEF3O95398 923 aa21.38■■□□□ 1.01
SDC2-203ENST00000519587 AFAP1Q8N556 730 aa21.38■■□□□ 1.01
SDC2-203ENST00000519587 ITGAEP38570 1179 aa21.37■■□□□ 1.01
SDC2-203ENST00000519587 ADGRL2O95490 1459 aa21.37■■□□□ 1.01
SDC2-203ENST00000519587 KIDINS220Q9ULH0 1771 aa21.36■■□□□ 1.01
SDC2-203ENST00000519587 ARHGEF40Q8TER5 1519 aa21.35■■□□□ 1.01
SDC2-203ENST00000519587 MYT1LQ9UL68 1186 aa21.35■■□□□ 1.01
SDC2-203ENST00000519587 ROCK1Q13464 1354 aa21.35■■□□□ 1.01
SDC2-203ENST00000519587 ANKRD30AQ9BXX3 1397 aa21.35■■□□□ 1.01
SDC2-203ENST00000519587 ABCA6Q8N139 1617 aa21.33■■□□□ 1
SDC2-203ENST00000519587 PTPRKQ15262 1439 aa21.32■■□□□ 1
SDC2-203ENST00000519587 GCC2Q8IWJ2 1684 aa21.32■■□□□ 1
SDC2-203ENST00000519587 DIP2CQ9Y2E4 1556 aa21.31■■□□□ 1
SDC2-203ENST00000519587 CHIC2Q9UKJ5 165 aa21.29■■□□□ 1
SDC2-203ENST00000519587 NCOA1Q15788 1441 aa21.29■■□□□ 1
SDC2-203ENST00000519587 KIF15Q9NS87 1388 aa21.28■■□□□ 1
SDC2-203ENST00000519587 DUOX2Q9NRD8 1548 aa21.28■■□□□ 1
SDC2-203ENST00000519587 HFM1A2PYH4 1435 aa21.26■□□□□ 0.99
SDC2-203ENST00000519587 YEATS2Q9ULM3 1422 aa21.26■□□□□ 0.99
SDC2-203ENST00000519587 REREQ9P2R6 1566 aa21.26■□□□□ 0.99
SDC2-203ENST00000519587 ATP10AO60312 1499 aa21.24■□□□□ 0.99
SDC2-203ENST00000519587 EIF2AK4Q9P2K8 1649 aaKnown RBP21.23■□□□□ 0.99
SDC2-203ENST00000519587 A2MP01023 1474 aa21.23■□□□□ 0.99
SDC2-203ENST00000519587 ERBINQ96RT1 1412 aa21.22■□□□□ 0.99
SDC2-203ENST00000519587 RRP7BPQ9NSQ0 103 aa21.21■□□□□ 0.99
SDC2-203ENST00000519587 PTPRMP28827 1452 aa21.2■□□□□ 0.98
SDC2-203ENST00000519587 NAIPQ13075 1403 aa21.2■□□□□ 0.98
SDC2-203ENST00000519587 ADAMTSL3P82987 1691 aa21.19■□□□□ 0.98
SDC2-203ENST00000519587 ANKRD50Q9ULJ7 1429 aa21.19■□□□□ 0.98
SDC2-203ENST00000519587 LMTK3Q96Q04 1460 aa21.19■□□□□ 0.98
SDC2-203ENST00000519587 BCORL1Q5H9F3 1711 aa21.18■□□□□ 0.98
SDC2-203ENST00000519587 DHX29Q7Z478 1369 aaKnown RBP21.18■□□□□ 0.98
SDC2-203ENST00000519587 SETD5Q9C0A6 1442 aa21.16■□□□□ 0.98
SDC2-203ENST00000519587 PCGF6Q9BYE7 350 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms