RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 CADPS2Q86UW7 1296 aa9.93□□□□□ -0.82
SKP1-205ENST00000519054 TMC2Q8TDI7 906 aa9.91□□□□□ -0.82
SKP1-205ENST00000519054 C2orf72A6NCS6 295 aa9.9□□□□□ -0.82
SKP1-205ENST00000519054 TSHZ2Q9NRE2 1034 aa9.9□□□□□ -0.82
SKP1-205ENST00000519054 NCKAP5LQ9HCH0 1330 aa9.88□□□□□ -0.83
SKP1-205ENST00000519054 KIF3CO14782 793 aa9.87□□□□□ -0.83
SKP1-205ENST00000519054 HAP1P54257 671 aaPredicted RBP9.87□□□□□ -0.83
SKP1-205ENST00000519054 CRISPLD2Q9H0B8 497 aa9.86□□□□□ -0.83
SKP1-205ENST00000519054 GPHNQ9NQX3 736 aaPredicted RBP9.86□□□□□ -0.83
SKP1-205ENST00000519054 PDE4AP27815 886 aa9.85□□□□□ -0.83
SKP1-205ENST00000519054 LARP6Q9BRS8 491 aaKnown RBP9.84□□□□□ -0.83
SKP1-205ENST00000519054 DSG2Q14126 1118 aa9.83□□□□□ -0.84
SKP1-205ENST00000519054 FOXK1P85037 733 aa9.81□□□□□ -0.84
SKP1-205ENST00000519054 PLPP6Q8IY26 295 aa9.8□□□□□ -0.84
SKP1-205ENST00000519054 DDX27Q96GQ7 796 aaKnown RBP9.8□□□□□ -0.84
SKP1-205ENST00000519054 SNPHO15079 494 aa9.79□□□□□ -0.84
SKP1-205ENST00000519054 PPP1R15BQ5SWA1 713 aa9.79□□□□□ -0.84
SKP1-205ENST00000519054 MFSD10Q14728 455 aa9.78□□□□□ -0.84
SKP1-205ENST00000519054 HOXB3P14651 431 aaPredicted RBP9.77□□□□□ -0.85
SKP1-205ENST00000519054 FAM163AQ96GL9 167 aaPredicted RBP9.76□□□□□ -0.85
SKP1-205ENST00000519054 DOK7Q18PE1 504 aa9.75□□□□□ -0.85
SKP1-205ENST00000519054 WDR70Q9NW82 654 aa9.75□□□□□ -0.85
SKP1-205ENST00000519054 ZNF710Q8N1W2 664 aa9.73□□□□□ -0.85
SKP1-205ENST00000519054 RIMBP2O15034 1052 aa9.71□□□□□ -0.86
SKP1-205ENST00000519054 ST18O60284 1047 aa9.71□□□□□ -0.86
SKP1-205ENST00000519054 UPF1Q92900 1129 aaKnown RBP eCLIP9.69□□□□□ -0.86
SKP1-205ENST00000519054 KDM2AQ9Y2K7 1162 aa9.69□□□□□ -0.86
SKP1-205ENST00000519054 SLC34A2O95436 690 aa9.68□□□□□ -0.86
SKP1-205ENST00000519054 LCE2DQ5TA82 110 aaPredicted RBP9.68□□□□□ -0.86
SKP1-205ENST00000519054 ARSIQ5FYB1 569 aa9.67□□□□□ -0.86
SKP1-205ENST00000519054 E2F4Q16254 413 aa9.66□□□□□ -0.86
SKP1-205ENST00000519054 VSIG10Q8N0Z9 540 aa9.66□□□□□ -0.86
SKP1-205ENST00000519054 PTCD2Q8WV60 388 aaKnown RBP9.66□□□□□ -0.86
SKP1-205ENST00000519054 KHSRPQ92945 711 aaKnown RBP eCLIP9.66□□□□□ -0.862e-7■■■□□ 16.3
SKP1-205ENST00000519054 ZSWIM6Q9HCJ5 1215 aa9.66□□□□□ -0.86
SKP1-205ENST00000519054 EMILIN3Q9NT22 766 aa9.66□□□□□ -0.86
SKP1-205ENST00000519054 PCDHGA4Q9Y5G9 962 aa9.66□□□□□ -0.86
SKP1-205ENST00000519054 CAMK2BQ13554 666 aa9.65□□□□□ -0.86
SKP1-205ENST00000519054 GPR153Q6NV75 609 aa9.65□□□□□ -0.86
SKP1-205ENST00000519054 OXER1Q8TDS5 423 aa9.65□□□□□ -0.86
SKP1-205ENST00000519054 HOXB1P14653 301 aaPredicted RBP9.64□□□□□ -0.87
SKP1-205ENST00000519054 MARVELD3Q96A59 401 aa9.64□□□□□ -0.87
SKP1-205ENST00000519054 TBC1D12O60347 775 aa9.62□□□□□ -0.87
SKP1-205ENST00000519054 NUDT7P0C024 238 aa9.61□□□□□ -0.87
SKP1-205ENST00000519054 MAP3K9P80192 1104 aa9.61□□□□□ -0.87
SKP1-205ENST00000519054 DPYSL4O14531 572 aa9.6□□□□□ -0.87
SKP1-205ENST00000519054 EMP3P54852 163 aa9.6□□□□□ -0.87
SKP1-205ENST00000519054 KCNV2Q8TDN2 545 aa9.6□□□□□ -0.87
SKP1-205ENST00000519054 SLC24A1O60721 1099 aa9.59□□□□□ -0.87
SKP1-205ENST00000519054 EVI5O60447 810 aa9.56□□□□□ -0.88
SKP1-205ENST00000519054 KDM4FA0A1W2PPD8 638 aa9.55□□□□□ -0.88
SKP1-205ENST00000519054 P3H3Q8IVL6 736 aa9.55□□□□□ -0.88
SKP1-205ENST00000519054 FAM205CA6NFA0 338 aa9.54□□□□□ -0.88
SKP1-205ENST00000519054 ZNF316A6NFI3 1004 aaPredicted RBP9.54□□□□□ -0.88
SKP1-205ENST00000519054 LHX6Q9UPM6 363 aa9.54□□□□□ -0.88
SKP1-205ENST00000519054 ERBB3P21860 1342 aa9.54□□□□□ -0.88
SKP1-205ENST00000519054 POTEMA6NI47 508 aa9.53□□□□□ -0.88
SKP1-205ENST00000519054 POTEGQ6S5H5 508 aa9.53□□□□□ -0.88
SKP1-205ENST00000519054 ARIH1Q9Y4X5 557 aaPredicted RBP9.53□□□□□ -0.88
SKP1-205ENST00000519054 ARHGEF1Q92888 912 aaKnown RBP9.52□□□□□ -0.89
SKP1-205ENST00000519054 VARS2Q5ST30 1063 aaKnown RBP9.51□□□□□ -0.89
SKP1-205ENST00000519054 PDIA6Q15084 440 aa9.5□□□□□ -0.89
SKP1-205ENST00000519054 HS3ST6Q96QI5 342 aa9.5□□□□□ -0.89
SKP1-205ENST00000519054 ANO8Q9HCE9 1232 aaPredicted RBP9.5□□□□□ -0.89
SKP1-205ENST00000519054 POTEB3A0JP26 581 aa9.49□□□□□ -0.89
SKP1-205ENST00000519054 POTEBQ6S5H4 581 aa9.49□□□□□ -0.89
SKP1-205ENST00000519054 SPDYE16A6NNV3 312 aaPredicted RBP9.48□□□□□ -0.89
SKP1-205ENST00000519054 ZNF454Q8N9F8 522 aa9.45□□□□□ -0.9
SKP1-205ENST00000519054 DDX12PQ92771 950 aa9.45□□□□□ -0.9
SKP1-205ENST00000519054 PSDA5PKW4 1024 aaPredicted RBP9.44□□□□□ -0.9
SKP1-205ENST00000519054 FOSBP53539 338 aa9.43□□□□□ -0.9
SKP1-205ENST00000519054 PPP4R3BQ5MIZ7 849 aa9.43□□□□□ -0.9
SKP1-205ENST00000519054 JPH4Q96JJ6 628 aa9.43□□□□□ -0.9
SKP1-205ENST00000519054 GRXCR2A6NFK2 248 aa9.42□□□□□ -0.9
SKP1-205ENST00000519054 PTGER2P43116 358 aa9.42□□□□□ -0.9
SKP1-205ENST00000519054 PCDHGA10Q9Y5H3 936 aa9.42□□□□□ -0.9
SKP1-205ENST00000519054 SEMA3EO15041 775 aa9.41□□□□□ -0.9
SKP1-205ENST00000519054 PHF14O94880 888 aa9.4□□□□□ -0.9
SKP1-205ENST00000519054 MLLT3P42568 568 aaPredicted RBP9.4□□□□□ -0.9
SKP1-205ENST00000519054 CDAN1Q8IWY9 1227 aa9.4□□□□□ -0.9
SKP1-205ENST00000519054 ZNF687Q8N1G0 1237 aa9.4□□□□□ -0.9
SKP1-205ENST00000519054 NBR1Q14596 966 aa9.39□□□□□ -0.91
SKP1-205ENST00000519054 ZDHHC16Q969W1 377 aa9.39□□□□□ -0.91
SKP1-205ENST00000519054 TYW1BQ6NUM6 668 aa9.38□□□□□ -0.91
SKP1-205ENST00000519054 RBM33Q96EV2 1170 aaKnown RBP9.37□□□□□ -0.91
SKP1-205ENST00000519054 ADAM33Q9BZ11 813 aa9.37□□□□□ -0.91
SKP1-205ENST00000519054 EPAS1Q99814 870 aa9.36□□□□□ -0.91
SKP1-205ENST00000519054 AXIN2Q9Y2T1 843 aa9.36□□□□□ -0.91
SKP1-205ENST00000519054 POTEEQ6S8J3 1075 aa9.35□□□□□ -0.91
SKP1-205ENST00000519054 FBXW7Q969H0 707 aa9.35□□□□□ -0.91
SKP1-205ENST00000519054 TESPA1A2RU30 521 aaPredicted RBP9.34□□□□□ -0.91
SKP1-205ENST00000519054 OSBPP22059 807 aa9.34□□□□□ -0.91
SKP1-205ENST00000519054 PRIM1P49642 420 aaKnown RBP9.34□□□□□ -0.91
SKP1-205ENST00000519054 KCNK17Q96T54 332 aa9.34□□□□□ -0.91
SKP1-205ENST00000519054 BCL2L12Q9HB09 334 aa9.34□□□□□ -0.91
SKP1-205ENST00000519054 PBX2P40425 430 aa9.33□□□□□ -0.92
SKP1-205ENST00000519054 PSEN2P49810 448 aa9.33□□□□□ -0.92
SKP1-205ENST00000519054 ARHGAP33O14559 1287 aa9.32□□□□□ -0.92
SKP1-205ENST00000519054 MAP3K7O43318 606 aa9.32□□□□□ -0.92
SKP1-205ENST00000519054 EN1Q05925 392 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms