RNA–Protein interactions for RNA: ENST00000518990.5

CDKL3-202, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 2

Gene CDKL3, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-202ENST00000518990 MARVELD3Q96A59 401 aa14.37□□□□□ -0.11
CDKL3-202ENST00000518990 DOK7Q18PE1 504 aa14.36□□□□□ -0.11
CDKL3-202ENST00000518990 C2orf72A6NCS6 295 aa14.35□□□□□ -0.11
CDKL3-202ENST00000518990 RYDENQ9NUL5 291 aaKnown RBP14.33□□□□□ -0.12
CDKL3-202ENST00000518990 GTPBP6O43824 516 aaPredicted RBP14.32□□□□□ -0.12
CDKL3-202ENST00000518990 PCDH10Q9P2E7 1040 aa14.32□□□□□ -0.12
CDKL3-202ENST00000518990 ZNF710Q8N1W2 664 aa14.31□□□□□ -0.12
CDKL3-202ENST00000518990 HOXB1P14653 301 aaPredicted RBP14.28□□□□□ -0.12
CDKL3-202ENST00000518990 EMP3P54852 163 aa14.28□□□□□ -0.12
CDKL3-202ENST00000518990 TMC2Q8TDI7 906 aa14.28□□□□□ -0.12
CDKL3-202ENST00000518990 RIMBP2O15034 1052 aa14.26□□□□□ -0.13
CDKL3-202ENST00000518990 CDAN1Q8IWY9 1227 aa14.25□□□□□ -0.13
CDKL3-202ENST00000518990 ZSWIM6Q9HCJ5 1215 aa14.25□□□□□ -0.13
CDKL3-202ENST00000518990 GPR153Q6NV75 609 aa14.23□□□□□ -0.13
CDKL3-202ENST00000518990 POTEB3A0JP26 581 aa14.21□□□□□ -0.13
CDKL3-202ENST00000518990 POTEBQ6S5H4 581 aa14.21□□□□□ -0.13
CDKL3-202ENST00000518990 FAM205CA6NFA0 338 aa14.2□□□□□ -0.14
CDKL3-202ENST00000518990 GPHNQ9NQX3 736 aaPredicted RBP14.2□□□□□ -0.14
CDKL3-202ENST00000518990 HS3ST6Q96QI5 342 aa14.19□□□□□ -0.14
CDKL3-202ENST00000518990 BBXQ8WY36 941 aaPredicted RBP14.17□□□□□ -0.14
CDKL3-202ENST00000518990 FOXK1P85037 733 aa14.16□□□□□ -0.14
CDKL3-202ENST00000518990 ARSIQ5FYB1 569 aa14.16□□□□□ -0.14
CDKL3-202ENST00000518990 SLC34A2O95436 690 aa14.15□□□□□ -0.14
CDKL3-202ENST00000518990 KHSRPQ92945 711 aaKnown RBP eCLIP14.14□□□□□ -0.15
CDKL3-202ENST00000518990 CRISPLD2Q9H0B8 497 aa14.14□□□□□ -0.15
CDKL3-202ENST00000518990 DSG2Q14126 1118 aa14.13□□□□□ -0.15
CDKL3-202ENST00000518990 PLPP6Q8IY26 295 aa14.12□□□□□ -0.15
CDKL3-202ENST00000518990 PLSCR2Q9NRY7 297 aa14.11□□□□□ -0.15
CDKL3-202ENST00000518990 ERBB3P21860 1342 aa14.11□□□□□ -0.15
CDKL3-202ENST00000518990 NCKAP5LQ9HCH0 1330 aa14.11□□□□□ -0.15
CDKL3-202ENST00000518990 PCDHGA4Q9Y5G9 962 aa14.09□□□□□ -0.15
CDKL3-202ENST00000518990 VARS2Q5ST30 1063 aaKnown RBP14.06□□□□□ -0.16
CDKL3-202ENST00000518990 PTCD2Q8WV60 388 aaKnown RBP14.05□□□□□ -0.16
CDKL3-202ENST00000518990 NUDT7P0C024 238 aa14.04□□□□□ -0.16
CDKL3-202ENST00000518990 PDE4AP27815 886 aa14.04□□□□□ -0.16
CDKL3-202ENST00000518990 CADPS2Q86UW7 1296 aa14.04□□□□□ -0.16
CDKL3-202ENST00000518990 KRTAP3-3Q9BYR6 98 aa14.04□□□□□ -0.16
CDKL3-202ENST00000518990 KRTAP3-2Q9BYR7 98 aa14.04□□□□□ -0.16
CDKL3-202ENST00000518990 PPP1R15BQ5SWA1 713 aa14.02□□□□□ -0.17
CDKL3-202ENST00000518990 ZNF316A6NFI3 1004 aaPredicted RBP14.01□□□□□ -0.17
CDKL3-202ENST00000518990 KDM4FA0A1W2PPD8 638 aa13.99□□□□□ -0.17
CDKL3-202ENST00000518990 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.99□□□□□ -0.17
CDKL3-202ENST00000518990 SPRYD3Q8NCJ5 442 aa13.98□□□□□ -0.17
CDKL3-202ENST00000518990 LARP6Q9BRS8 491 aaKnown RBP13.98□□□□□ -0.17
CDKL3-202ENST00000518990 MFSD10Q14728 455 aa13.97□□□□□ -0.17
CDKL3-202ENST00000518990 ZNF687Q8N1G0 1237 aa13.96□□□□□ -0.17
CDKL3-202ENST00000518990 LHX6Q9UPM6 363 aa13.96□□□□□ -0.17
CDKL3-202ENST00000518990 OXER1Q8TDS5 423 aa13.95□□□□□ -0.18
CDKL3-202ENST00000518990 DDX27Q96GQ7 796 aaKnown RBP13.95□□□□□ -0.18
CDKL3-202ENST00000518990 PAXIP1Q6ZW49 1069 aaPredicted RBP13.91□□□□□ -0.18
CDKL3-202ENST00000518990 SPNS2Q8IVW8 549 aa13.91□□□□□ -0.18
CDKL3-202ENST00000518990 UPF1Q92900 1129 aaKnown RBP eCLIP13.91□□□□□ -0.18
CDKL3-202ENST00000518990 TBC1D12O60347 775 aa13.9□□□□□ -0.18
CDKL3-202ENST00000518990 CFAP44Q96MT7 982 aa13.9□□□□□ -0.18
CDKL3-202ENST00000518990 EMILIN3Q9NT22 766 aa13.83□□□□□ -0.2
CDKL3-202ENST00000518990 MMRN1Q13201 1228 aa13.82□□□□□ -0.2
CDKL3-202ENST00000518990 POTEEQ6S8J3 1075 aa13.82□□□□□ -0.2
CDKL3-202ENST00000518990 PSDA5PKW4 1024 aaPredicted RBP13.81□□□□□ -0.2
CDKL3-202ENST00000518990 CAMK2BQ13554 666 aa13.78□□□□□ -0.2
CDKL3-202ENST00000518990 PBX2P40425 430 aa13.77□□□□□ -0.21
CDKL3-202ENST00000518990 ANO8Q9HCE9 1232 aaPredicted RBP13.76□□□□□ -0.21
CDKL3-202ENST00000518990 AXIN2Q9Y2T1 843 aa13.76□□□□□ -0.21
CDKL3-202ENST00000518990 EVI5O60447 810 aa13.75□□□□□ -0.21
CDKL3-202ENST00000518990 MAP3K9P80192 1104 aa13.74□□□□□ -0.21
CDKL3-202ENST00000518990 LSM11P83369 360 aaKnown RBP eCLIP13.74□□□□□ -0.21
CDKL3-202ENST00000518990 PPP4R3BQ5MIZ7 849 aa13.73□□□□□ -0.21
CDKL3-202ENST00000518990 ANKRD13DQ6ZTN6 518 aa13.7□□□□□ -0.22
CDKL3-202ENST00000518990 ARHGAP33O14559 1287 aa13.69□□□□□ -0.22
CDKL3-202ENST00000518990 FOSBP53539 338 aa13.69□□□□□ -0.22
CDKL3-202ENST00000518990 ZNF454Q8N9F8 522 aa13.69□□□□□ -0.22
CDKL3-202ENST00000518990 DPYSL4O14531 572 aa13.66□□□□□ -0.22
CDKL3-202ENST00000518990 PSEN2P49810 448 aa13.66□□□□□ -0.22
CDKL3-202ENST00000518990 JPH4Q96JJ6 628 aa13.66□□□□□ -0.22
CDKL3-202ENST00000518990 TSHZ2Q9NRE2 1034 aa13.64□□□□□ -0.23
CDKL3-202ENST00000518990 DMRTA1Q5VZB9 504 aa13.63□□□□□ -0.23
CDKL3-202ENST00000518990 BCL2L12Q9HB09 334 aa13.62□□□□□ -0.23
CDKL3-202ENST00000518990 PTGER2P43116 358 aa13.6□□□□□ -0.23
CDKL3-202ENST00000518990 E2F4Q16254 413 aa13.6□□□□□ -0.23
CDKL3-202ENST00000518990 KCNK17Q96T54 332 aa13.6□□□□□ -0.23
CDKL3-202ENST00000518990 MYT1LQ9UL68 1186 aa13.6□□□□□ -0.23
CDKL3-202ENST00000518990 WDR70Q9NW82 654 aa13.59□□□□□ -0.23
CDKL3-202ENST00000518990 ADGRD1Q6QNK2 874 aa13.58□□□□□ -0.24
CDKL3-202ENST00000518990 ZDHHC16Q969W1 377 aa13.58□□□□□ -0.24
CDKL3-202ENST00000518990 ADAM33Q9BZ11 813 aa13.58□□□□□ -0.24
CDKL3-202ENST00000518990 PCDHGA10Q9Y5H3 936 aa13.58□□□□□ -0.24
CDKL3-202ENST00000518990 RNF166Q96A37 237 aaPredicted RBP13.57□□□□□ -0.24
CDKL3-202ENST00000518990 TK2O00142 265 aa13.56□□□□□ -0.24
CDKL3-202ENST00000518990 PHF14O94880 888 aa13.54□□□□□ -0.24
CDKL3-202ENST00000518990 PDIA6Q15084 440 aa13.54□□□□□ -0.24
CDKL3-202ENST00000518990 ARIH1Q9Y4X5 557 aaPredicted RBP13.54□□□□□ -0.24
CDKL3-202ENST00000518990 PTPREP23469 700 aa13.53□□□□□ -0.24
CDKL3-202ENST00000518990 KCNH8Q96L42 1107 aa13.53□□□□□ -0.24
CDKL3-202ENST00000518990 HRO43593 1189 aa13.52□□□□□ -0.25
CDKL3-202ENST00000518990 TYW1BQ6NUM6 668 aa13.51□□□□□ -0.25
CDKL3-202ENST00000518990 PLCB2Q00722 1185 aa13.5□□□□□ -0.25
CDKL3-202ENST00000518990 SPDYE16A6NNV3 312 aaPredicted RBP13.49□□□□□ -0.25
CDKL3-202ENST00000518990 FBXW7Q969H0 707 aa13.49□□□□□ -0.25
CDKL3-202ENST00000518990 DDX12PQ92771 950 aa13.48□□□□□ -0.25
CDKL3-202ENST00000518990 SLC4A5Q9BY07 1137 aa13.48□□□□□ -0.25
CDKL3-202ENST00000518990 VPS9D1Q9Y2B5 631 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms