RNA–Protein interactions for RNA: ENST00000518962.1

LINC00293-202, long intergenic non-protein coding RNA 293, humanhuman

TSL 3

Gene LINC00293, Length 706 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00293-202ENST00000518962 LARP6Q9BRS8 491 aaKnown RBP10.67□□□□□ -0.7
LINC00293-202ENST00000518962 MFSD10Q14728 455 aa10.66□□□□□ -0.7
LINC00293-202ENST00000518962 DDX27Q96GQ7 796 aaKnown RBP10.65□□□□□ -0.7
LINC00293-202ENST00000518962 P3H3Q8IVL6 736 aa10.64□□□□□ -0.71
LINC00293-202ENST00000518962 TMC2Q8TDI7 906 aa10.63□□□□□ -0.71
LINC00293-202ENST00000518962 KCNV2Q8TDN2 545 aa10.63□□□□□ -0.71
LINC00293-202ENST00000518962 GPHNQ9NQX3 736 aaPredicted RBP10.63□□□□□ -0.71
LINC00293-202ENST00000518962 C3orf67Q6ZVT6 689 aa10.62□□□□□ -0.71
LINC00293-202ENST00000518962 BCANQ96GW7 911 aa10.62□□□□□ -0.71
LINC00293-202ENST00000518962 PPP1R15BQ5SWA1 713 aa10.61□□□□□ -0.71
LINC00293-202ENST00000518962 TMEM92Q6UXU6 159 aa10.61□□□□□ -0.71
LINC00293-202ENST00000518962 C2orf72A6NCS6 295 aa10.6□□□□□ -0.71
LINC00293-202ENST00000518962 KIF3CO14782 793 aa10.6□□□□□ -0.71
LINC00293-202ENST00000518962 DSG2Q14126 1118 aa10.59□□□□□ -0.71
LINC00293-202ENST00000518962 E2F4Q16254 413 aa10.59□□□□□ -0.71
LINC00293-202ENST00000518962 POTEB2H3BUK9 544 aa10.56□□□□□ -0.72
LINC00293-202ENST00000518962 FOXK1P85037 733 aa10.56□□□□□ -0.72
LINC00293-202ENST00000518962 POTEJP0CG39 1038 aa10.55□□□□□ -0.72
LINC00293-202ENST00000518962 CAMK2BQ13554 666 aa10.55□□□□□ -0.72
LINC00293-202ENST00000518962 NBR1Q14596 966 aa10.55□□□□□ -0.72
LINC00293-202ENST00000518962 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.53□□□□□ -0.72
LINC00293-202ENST00000518962 PLPP6Q8IY26 295 aa10.52□□□□□ -0.73
LINC00293-202ENST00000518962 ARHGEF1Q92888 912 aaKnown RBP10.51□□□□□ -0.73
LINC00293-202ENST00000518962 EMILIN3Q9NT22 766 aa10.49□□□□□ -0.73
LINC00293-202ENST00000518962 ARIH1Q9Y4X5 557 aaPredicted RBP10.48□□□□□ -0.73
LINC00293-202ENST00000518962 SCUBE2Q9NQ36 999 aa10.46□□□□□ -0.73
LINC00293-202ENST00000518962 DPYSL4O14531 572 aa10.44□□□□□ -0.74
LINC00293-202ENST00000518962 MAMSTRQ6ZN01 415 aa10.44□□□□□ -0.74
LINC00293-202ENST00000518962 SLAIN1Q8ND83 568 aa10.41□□□□□ -0.74
LINC00293-202ENST00000518962 UPF1Q92900 1129 aaKnown RBP eCLIP10.41□□□□□ -0.74
LINC00293-202ENST00000518962 OXER1Q8TDS5 423 aa10.4□□□□□ -0.74
LINC00293-202ENST00000518962 SEMA3EO15041 775 aa10.39□□□□□ -0.75
LINC00293-202ENST00000518962 PDIA6Q15084 440 aa10.38□□□□□ -0.75
LINC00293-202ENST00000518962 TESPA1A2RU30 521 aaPredicted RBP10.36□□□□□ -0.75
LINC00293-202ENST00000518962 SLC34A2O95436 690 aa10.36□□□□□ -0.75
LINC00293-202ENST00000518962 MAP3K9P80192 1104 aa10.35□□□□□ -0.75
LINC00293-202ENST00000518962 PTCD2Q8WV60 388 aaKnown RBP10.35□□□□□ -0.75
LINC00293-202ENST00000518962 OTUD5Q96G74 571 aa10.35□□□□□ -0.75
LINC00293-202ENST00000518962 SPDYE16A6NNV3 312 aaPredicted RBP10.34□□□□□ -0.75
LINC00293-202ENST00000518962 LHX8Q68G74 356 aa10.34□□□□□ -0.75
LINC00293-202ENST00000518962 HOXB3P14651 431 aaPredicted RBP10.32□□□□□ -0.76
LINC00293-202ENST00000518962 DOK7Q18PE1 504 aa10.31□□□□□ -0.76
LINC00293-202ENST00000518962 PCDHGA4Q9Y5G9 962 aa10.3□□□□□ -0.76
LINC00293-202ENST00000518962 TULP1O00294 542 aaPredicted RBP10.29□□□□□ -0.76
LINC00293-202ENST00000518962 TBC1D12O60347 775 aa10.29□□□□□ -0.76
LINC00293-202ENST00000518962 EVI5O60447 810 aa10.29□□□□□ -0.76
LINC00293-202ENST00000518962 MLLT3P42568 568 aaPredicted RBP10.29□□□□□ -0.76
LINC00293-202ENST00000518962 ZNF316A6NFI3 1004 aaPredicted RBP10.28□□□□□ -0.76
LINC00293-202ENST00000518962 LMOD2Q6P5Q4 547 aa10.27□□□□□ -0.77
LINC00293-202ENST00000518962 RIMBP2O15034 1052 aa10.26□□□□□ -0.77
LINC00293-202ENST00000518962 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.26□□□□□ -0.77
LINC00293-202ENST00000518962 TPRNQ4KMQ1 711 aa10.25□□□□□ -0.77
LINC00293-202ENST00000518962 SMYD5Q6GMV2 418 aa10.25□□□□□ -0.77
LINC00293-202ENST00000518962 ZSWIM6Q9HCJ5 1215 aa10.24□□□□□ -0.77
LINC00293-202ENST00000518962 SNPHO15079 494 aa10.23□□□□□ -0.77
LINC00293-202ENST00000518962 ZNF710Q8N1W2 664 aa10.23□□□□□ -0.77
LINC00293-202ENST00000518962 KDM4FA0A1W2PPD8 638 aa10.22□□□□□ -0.77
LINC00293-202ENST00000518962 PTGER2P43116 358 aa10.22□□□□□ -0.77
LINC00293-202ENST00000518962 ARSIQ5FYB1 569 aa10.22□□□□□ -0.77
LINC00293-202ENST00000518962 DDX12PQ92771 950 aa10.22□□□□□ -0.77
LINC00293-202ENST00000518962 KHSRPQ92945 711 aaKnown RBP eCLIP10.22□□□□□ -0.77
LINC00293-202ENST00000518962 ANO8Q9HCE9 1232 aaPredicted RBP10.22□□□□□ -0.77
LINC00293-202ENST00000518962 GRXCR2A6NFK2 248 aa10.21□□□□□ -0.77
LINC00293-202ENST00000518962 PRKCSHP14314 528 aaPredicted RBP10.21□□□□□ -0.77
LINC00293-202ENST00000518962 GPR153Q6NV75 609 aa10.21□□□□□ -0.77
LINC00293-202ENST00000518962 NUDT7P0C024 238 aa10.2□□□□□ -0.78
LINC00293-202ENST00000518962 RBM26Q5T8P6 1007 aaKnown RBP10.18□□□□□ -0.78
LINC00293-202ENST00000518962 OSBPP22059 807 aa10.16□□□□□ -0.78
LINC00293-202ENST00000518962 JPH4Q96JJ6 628 aa10.15□□□□□ -0.78
LINC00293-202ENST00000518962 PHF14O94880 888 aa10.14□□□□□ -0.79
LINC00293-202ENST00000518962 HOXB1P14653 301 aaPredicted RBP10.14□□□□□ -0.79
LINC00293-202ENST00000518962 PRIM1P49642 420 aaKnown RBP10.14□□□□□ -0.79
LINC00293-202ENST00000518962 GPIHBP1Q8IV16 184 aa10.14□□□□□ -0.79
LINC00293-202ENST00000518962 PCDHGA10Q9Y5H3 936 aa10.13□□□□□ -0.79
LINC00293-202ENST00000518962 FOSBP53539 338 aa10.12□□□□□ -0.79
LINC00293-202ENST00000518962 ZC3H15Q8WU90 426 aaKnown RBP10.12□□□□□ -0.79
LINC00293-202ENST00000518962 EPAS1Q99814 870 aa10.12□□□□□ -0.79
LINC00293-202ENST00000518962 LHX6Q9UPM6 363 aa10.11□□□□□ -0.79
LINC00293-202ENST00000518962 EN1Q05925 392 aaPredicted RBP10.1□□□□□ -0.79
LINC00293-202ENST00000518962 TYW1BQ6NUM6 668 aa10.1□□□□□ -0.79
LINC00293-202ENST00000518962 ZNF454Q8N9F8 522 aa10.1□□□□□ -0.79
LINC00293-202ENST00000518962 NUTM2FA1L443 756 aa10.08□□□□□ -0.8
LINC00293-202ENST00000518962 GPR37O15354 613 aa10.08□□□□□ -0.8
LINC00293-202ENST00000518962 FBXW7Q969H0 707 aa10.08□□□□□ -0.8
LINC00293-202ENST00000518962 MAP3K7O43318 606 aa10.07□□□□□ -0.8
LINC00293-202ENST00000518962 ST18O60284 1047 aa10.07□□□□□ -0.8
LINC00293-202ENST00000518962 RBM33Q96EV2 1170 aaKnown RBP10.07□□□□□ -0.8
LINC00293-202ENST00000518962 ZDHHC16Q969W1 377 aa10.06□□□□□ -0.8
LINC00293-202ENST00000518962 CDHR5Q9HBB8 845 aa10.06□□□□□ -0.8
LINC00293-202ENST00000518962 PSDA5PKW4 1024 aaPredicted RBP10.05□□□□□ -0.8
LINC00293-202ENST00000518962 TSR1Q2NL82 804 aaKnown RBP10.04□□□□□ -0.8
LINC00293-202ENST00000518962 PPP4R3BQ5MIZ7 849 aa10.04□□□□□ -0.8
LINC00293-202ENST00000518962 ADAM33Q9BZ11 813 aa10.04□□□□□ -0.8
LINC00293-202ENST00000518962 ZMYND10O75800 440 aa10.03□□□□□ -0.8
LINC00293-202ENST00000518962 FCHSD2O94868 740 aa10.01□□□□□ -0.81
LINC00293-202ENST00000518962 EMP3P54852 163 aa10.01□□□□□ -0.81
LINC00293-202ENST00000518962 PTGDRQ13258 359 aa10.01□□□□□ -0.81
LINC00293-202ENST00000518962 MARVELD3Q96A59 401 aa10.01□□□□□ -0.81
LINC00293-202ENST00000518962 LCE2DQ5TA82 110 aaPredicted RBP10□□□□□ -0.81
LINC00293-202ENST00000518962 BARGINQ6ZT62 677 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms