RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 NCKAP5LQ9HCH0 1330 aa13.22□□□□□ -0.29
SQLE-203ENST00000518931 LARP6Q9BRS8 491 aaKnown RBP13.21□□□□□ -0.29
SQLE-203ENST00000518931 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.21□□□□□ -0.29
SQLE-203ENST00000518931 CRISPLD2Q9H0B8 497 aa13.2□□□□□ -0.3
SQLE-203ENST00000518931 TMC2Q8TDI7 906 aa13.19□□□□□ -0.3
SQLE-203ENST00000518931 TMEM92Q6UXU6 159 aa13.18□□□□□ -0.3
SQLE-203ENST00000518931 GPHNQ9NQX3 736 aaPredicted RBP13.18□□□□□ -0.3
SQLE-203ENST00000518931 WDR70Q9NW82 654 aa13.18□□□□□ -0.3
SQLE-203ENST00000518931 LHX8Q68G74 356 aa13.16□□□□□ -0.3
SQLE-203ENST00000518931 MAMSTRQ6ZN01 415 aa13.16□□□□□ -0.3
SQLE-203ENST00000518931 C2orf72A6NCS6 295 aa13.15□□□□□ -0.3
SQLE-203ENST00000518931 SCUBE2Q9NQ36 999 aa13.14□□□□□ -0.31
SQLE-203ENST00000518931 KIF3CO14782 793 aa13.13□□□□□ -0.31
SQLE-203ENST00000518931 DDX27Q96GQ7 796 aaKnown RBP13.13□□□□□ -0.31
SQLE-203ENST00000518931 DSG2Q14126 1118 aa13.1□□□□□ -0.31
SQLE-203ENST00000518931 MFSD10Q14728 455 aa13.1□□□□□ -0.31
SQLE-203ENST00000518931 FOXK1P85037 733 aa13.09□□□□□ -0.31
SQLE-203ENST00000518931 PPP1R15BQ5SWA1 713 aa13.08□□□□□ -0.32
SQLE-203ENST00000518931 SLAIN1Q8ND83 568 aa13.08□□□□□ -0.32
SQLE-203ENST00000518931 PLPP6Q8IY26 295 aa13.06□□□□□ -0.32
SQLE-203ENST00000518931 OTUD5Q96G74 571 aa13.06□□□□□ -0.32
SQLE-203ENST00000518931 E2F4Q16254 413 aa13.02□□□□□ -0.33
SQLE-203ENST00000518931 CAMK2BQ13554 666 aa12.97□□□□□ -0.33
SQLE-203ENST00000518931 KCNV2Q8TDN2 545 aa12.96□□□□□ -0.33
SQLE-203ENST00000518931 P3H3Q8IVL6 736 aa12.95□□□□□ -0.34
SQLE-203ENST00000518931 EMILIN3Q9NT22 766 aa12.93□□□□□ -0.34
SQLE-203ENST00000518931 UPF1Q92900 1129 aaKnown RBP eCLIP12.9□□□□□ -0.34
SQLE-203ENST00000518931 ARHGEF1Q92888 912 aaKnown RBP12.89□□□□□ -0.35
SQLE-203ENST00000518931 HOXB3P14651 431 aaPredicted RBP12.88□□□□□ -0.35
SQLE-203ENST00000518931 SLC34A2O95436 690 aa12.87□□□□□ -0.35
SQLE-203ENST00000518931 SNPHO15079 494 aa12.86□□□□□ -0.35
SQLE-203ENST00000518931 MAP3K9P80192 1104 aa12.86□□□□□ -0.35
SQLE-203ENST00000518931 DOK7Q18PE1 504 aa12.86□□□□□ -0.35
SQLE-203ENST00000518931 OXER1Q8TDS5 423 aa12.86□□□□□ -0.35
SQLE-203ENST00000518931 DPYSL4O14531 572 aa12.85□□□□□ -0.35
SQLE-203ENST00000518931 PTCD2Q8WV60 388 aaKnown RBP12.85□□□□□ -0.35
SQLE-203ENST00000518931 ARIH1Q9Y4X5 557 aaPredicted RBP12.84□□□□□ -0.35
SQLE-203ENST00000518931 TBC1D12O60347 775 aa12.83□□□□□ -0.36
SQLE-203ENST00000518931 ZNF710Q8N1W2 664 aa12.82□□□□□ -0.36
SQLE-203ENST00000518931 RIMBP2O15034 1052 aa12.81□□□□□ -0.36
SQLE-203ENST00000518931 PCDHGA4Q9Y5G9 962 aa12.81□□□□□ -0.36
SQLE-203ENST00000518931 NBR1Q14596 966 aa12.79□□□□□ -0.36
SQLE-203ENST00000518931 ARSIQ5FYB1 569 aa12.78□□□□□ -0.36
SQLE-203ENST00000518931 BCANQ96GW7 911 aa12.78□□□□□ -0.36
SQLE-203ENST00000518931 KHSRPQ92945 711 aaKnown RBP eCLIP12.76□□□□□ -0.372e-11■■■■□ 22.8
SQLE-203ENST00000518931 ZSWIM6Q9HCJ5 1215 aa12.76□□□□□ -0.37
SQLE-203ENST00000518931 SPDYE16A6NNV3 312 aaPredicted RBP12.75□□□□□ -0.37
SQLE-203ENST00000518931 EVI5O60447 810 aa12.75□□□□□ -0.37
SQLE-203ENST00000518931 GPR153Q6NV75 609 aa12.75□□□□□ -0.37
SQLE-203ENST00000518931 SEMA3EO15041 775 aa12.73□□□□□ -0.37
SQLE-203ENST00000518931 PDIA6Q15084 440 aa12.73□□□□□ -0.37
SQLE-203ENST00000518931 FAM163AQ96GL9 167 aaPredicted RBP12.72□□□□□ -0.37
SQLE-203ENST00000518931 NUDT7P0C024 238 aa12.71□□□□□ -0.37
SQLE-203ENST00000518931 ST18O60284 1047 aa12.69□□□□□ -0.38
SQLE-203ENST00000518931 ANO8Q9HCE9 1232 aaPredicted RBP12.69□□□□□ -0.38
SQLE-203ENST00000518931 KDM4FA0A1W2PPD8 638 aa12.68□□□□□ -0.38
SQLE-203ENST00000518931 HOXB1P14653 301 aaPredicted RBP12.68□□□□□ -0.38
SQLE-203ENST00000518931 ZNF316A6NFI3 1004 aaPredicted RBP12.67□□□□□ -0.38
SQLE-203ENST00000518931 MLLT3P42568 568 aaPredicted RBP12.65□□□□□ -0.38
SQLE-203ENST00000518931 TESPA1A2RU30 521 aaPredicted RBP12.64□□□□□ -0.39
SQLE-203ENST00000518931 DDX12PQ92771 950 aa12.64□□□□□ -0.39
SQLE-203ENST00000518931 GRXCR2A6NFK2 248 aa12.63□□□□□ -0.39
SQLE-203ENST00000518931 PTGER2P43116 358 aa12.63□□□□□ -0.39
SQLE-203ENST00000518931 LHX6Q9UPM6 363 aa12.61□□□□□ -0.39
SQLE-203ENST00000518931 SMYD5Q6GMV2 418 aa12.6□□□□□ -0.39
SQLE-203ENST00000518931 MARVELD3Q96A59 401 aa12.59□□□□□ -0.39
SQLE-203ENST00000518931 LCE2DQ5TA82 110 aaPredicted RBP12.57□□□□□ -0.4
SQLE-203ENST00000518931 TULP1O00294 542 aaPredicted RBP12.56□□□□□ -0.4
SQLE-203ENST00000518931 PHF14O94880 888 aa12.55□□□□□ -0.4
SQLE-203ENST00000518931 EMP3P54852 163 aa12.55□□□□□ -0.4
SQLE-203ENST00000518931 ZNF454Q8N9F8 522 aa12.55□□□□□ -0.4
SQLE-203ENST00000518931 PCDHGA10Q9Y5H3 936 aa12.55□□□□□ -0.4
SQLE-203ENST00000518931 FOSBP53539 338 aa12.54□□□□□ -0.4
SQLE-203ENST00000518931 ERBB3P21860 1342 aa12.54□□□□□ -0.4
SQLE-203ENST00000518931 OSBPP22059 807 aa12.53□□□□□ -0.4
SQLE-203ENST00000518931 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.53□□□□□ -0.4
SQLE-203ENST00000518931 JPH4Q96JJ6 628 aa12.53□□□□□ -0.4
SQLE-203ENST00000518931 EPAS1Q99814 870 aa12.52□□□□□ -0.41
SQLE-203ENST00000518931 PSDA5PKW4 1024 aaPredicted RBP12.5□□□□□ -0.41
SQLE-203ENST00000518931 FAM205CA6NFA0 338 aa12.5□□□□□ -0.41
SQLE-203ENST00000518931 RBM26Q5T8P6 1007 aaKnown RBP12.5□□□□□ -0.41
SQLE-203ENST00000518931 TYW1BQ6NUM6 668 aa12.5□□□□□ -0.41
SQLE-203ENST00000518931 PPP4R3BQ5MIZ7 849 aa12.49□□□□□ -0.41
SQLE-203ENST00000518931 VARS2Q5ST30 1063 aaKnown RBP12.49□□□□□ -0.41
SQLE-203ENST00000518931 ZDHHC16Q969W1 377 aa12.49□□□□□ -0.41
SQLE-203ENST00000518931 RBM33Q96EV2 1170 aaKnown RBP12.49□□□□□ -0.41
SQLE-203ENST00000518931 PRIM1P49642 420 aaKnown RBP12.48□□□□□ -0.41
SQLE-203ENST00000518931 LMOD2Q6P5Q4 547 aa12.48□□□□□ -0.41
SQLE-203ENST00000518931 FBXW7Q969H0 707 aa12.47□□□□□ -0.41
SQLE-203ENST00000518931 EN1Q05925 392 aaPredicted RBP12.45□□□□□ -0.42
SQLE-203ENST00000518931 MAP3K7O43318 606 aa12.44□□□□□ -0.42
SQLE-203ENST00000518931 ADAM33Q9BZ11 813 aa12.44□□□□□ -0.42
SQLE-203ENST00000518931 NUTM2FA1L443 756 aa12.43□□□□□ -0.42
SQLE-203ENST00000518931 HS3ST6Q96QI5 342 aa12.43□□□□□ -0.42
SQLE-203ENST00000518931 POTEB3A0JP26 581 aa12.42□□□□□ -0.42
SQLE-203ENST00000518931 POTEBQ6S5H4 581 aa12.42□□□□□ -0.42
SQLE-203ENST00000518931 C6orf132Q5T0Z8 1188 aa12.41□□□□□ -0.42
SQLE-203ENST00000518931 TSR1Q2NL82 804 aaKnown RBP12.4□□□□□ -0.42
SQLE-203ENST00000518931 BCL2L12Q9HB09 334 aa12.4□□□□□ -0.42
SQLE-203ENST00000518931 GPIHBP1Q8IV16 184 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms