RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 RBM26Q5T8P6 1007 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-212ENST00000518919 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.65□□□□□ -1.027e-9■■□□□ 11.7
CTNNA1-212ENST00000518919 TIE1P35590 1138 aa8.64□□□□□ -1.03
CTNNA1-212ENST00000518919 GPHNQ9NQX3 736 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-212ENST00000518919 AK7Q96M32 723 aa8.63□□□□□ -1.03
CTNNA1-212ENST00000518919 TTLL13PA6NNM8 815 aa8.62□□□□□ -1.03
CTNNA1-212ENST00000518919 DPYSL4O14531 572 aa8.62□□□□□ -1.03
CTNNA1-212ENST00000518919 KRI1Q8N9T8 703 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-212ENST00000518919 SPDYE16A6NNV3 312 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-212ENST00000518919 PDIA6Q15084 440 aa8.6□□□□□ -1.03
CTNNA1-212ENST00000518919 ILDR1Q86SU0 546 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-212ENST00000518919 GPBP1L1Q9HC44 474 aaPredicted RBP8.59□□□□□ -1.03
CTNNA1-212ENST00000518919 EMILIN3Q9NT22 766 aa8.59□□□□□ -1.03
CTNNA1-212ENST00000518919 C19orf67A6NJJ6 358 aa8.58□□□□□ -1.04
CTNNA1-212ENST00000518919 DSG2Q14126 1118 aa8.58□□□□□ -1.04
CTNNA1-212ENST00000518919 TMC2Q8TDI7 906 aa8.58□□□□□ -1.04
CTNNA1-212ENST00000518919 BMP2KQ9NSY1 1161 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-212ENST00000518919 DAXXQ9UER7 740 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-212ENST00000518919 TRIM35Q9UPQ4 493 aa8.58□□□□□ -1.04
CTNNA1-212ENST00000518919 MICALL2Q8IY33 904 aa8.57□□□□□ -1.04
CTNNA1-212ENST00000518919 HOMEZQ8IX15 550 aa8.56□□□□□ -1.04
CTNNA1-212ENST00000518919 KDM4CQ9H3R0 1056 aa8.55□□□□□ -1.04
CTNNA1-212ENST00000518919 DPY19L2Q6NUT2 758 aa8.54□□□□□ -1.04
CTNNA1-212ENST00000518919 TRIM66O15016 1216 aa8.53□□□□□ -1.04
CTNNA1-212ENST00000518919 FOXK1P85037 733 aa8.53□□□□□ -1.04
CTNNA1-212ENST00000518919 PDE4DQ08499 809 aa8.53□□□□□ -1.04
CTNNA1-212ENST00000518919 DCAF1Q9Y4B6 1507 aa8.52□□□□□ -1.05
CTNNA1-212ENST00000518919 SUPT5HO00267 1087 aaKnown RBP8.51□□□□□ -1.05
CTNNA1-212ENST00000518919 GPR37O15354 613 aa8.51□□□□□ -1.05
CTNNA1-212ENST00000518919 PLPP6Q8IY26 295 aa8.51□□□□□ -1.05
CTNNA1-212ENST00000518919 IL27Q8NEV9 243 aa8.51□□□□□ -1.05
CTNNA1-212ENST00000518919 SHROOM4Q9ULL8 1493 aa8.51□□□□□ -1.05
CTNNA1-212ENST00000518919 G3V3G9 751 aa8.5□□□□□ -1.05
CTNNA1-212ENST00000518919 GALR2O43603 387 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-212ENST00000518919 PDCD7Q8N8D1 485 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-212ENST00000518919 C2orf72A6NCS6 295 aa8.48□□□□□ -1.05
CTNNA1-212ENST00000518919 GRXCR2A6NFK2 248 aa8.48□□□□□ -1.05
CTNNA1-212ENST00000518919 BOLA1Q9Y3E2 137 aa8.48□□□□□ -1.05
CTNNA1-212ENST00000518919 NUTM2FA1L443 756 aa8.47□□□□□ -1.05
CTNNA1-212ENST00000518919 MAP3K9P80192 1104 aa8.47□□□□□ -1.05
CTNNA1-212ENST00000518919 MAP2K5Q13163 448 aa8.46□□□□□ -1.06
CTNNA1-212ENST00000518919 CCDC102AQ96A19 550 aa8.45□□□□□ -1.06
CTNNA1-212ENST00000518919 TMEM121BQ9BXQ6 578 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-212ENST00000518919 MINK1Q8N4C8 1332 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-212ENST00000518919 KIF3CO14782 793 aa8.44□□□□□ -1.06
CTNNA1-212ENST00000518919 ATN1P54259 1190 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-212ENST00000518919 IRX5P78411 483 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-212ENST00000518919 UPF1Q92900 1129 aaKnown RBP eCLIP8.44□□□□□ -1.06
CTNNA1-212ENST00000518919 OCEL1Q9H607 264 aa8.44□□□□□ -1.06
CTNNA1-212ENST00000518919 IER5LQ5T953 404 aa8.43□□□□□ -1.06
CTNNA1-212ENST00000518919 PLCG2P16885 1265 aa8.42□□□□□ -1.06
CTNNA1-212ENST00000518919 GNPATO15228 680 aa8.41□□□□□ -1.06
CTNNA1-212ENST00000518919 CLCN6P51797 869 aa8.41□□□□□ -1.06
CTNNA1-212ENST00000518919 DDRGK1Q96HY6 314 aa8.41□□□□□ -1.06
CTNNA1-212ENST00000518919 FAM117AQ9C073 453 aa8.41□□□□□ -1.06
CTNNA1-212ENST00000518919 ZNF316A6NFI3 1004 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-212ENST00000518919 IRF6O14896 467 aa8.4□□□□□ -1.06
CTNNA1-212ENST00000518919 ATMINO43313 823 aaPredicted RBP8.4□□□□□ -1.06
CTNNA1-212ENST00000518919 FCHSD2O94868 740 aa8.4□□□□□ -1.06
CTNNA1-212ENST00000518919 OSBPP22059 807 aa8.4□□□□□ -1.06
CTNNA1-212ENST00000518919 AMHR2Q16671 573 aa8.4□□□□□ -1.06
CTNNA1-212ENST00000518919 HIC1Q14526 733 aa8.39□□□□□ -1.07
CTNNA1-212ENST00000518919 PARP9Q8IXQ6 854 aa8.39□□□□□ -1.07
CTNNA1-212ENST00000518919 OXER1Q8TDS5 423 aa8.39□□□□□ -1.07
CTNNA1-212ENST00000518919 DDX12PQ92771 950 aa8.39□□□□□ -1.07
CTNNA1-212ENST00000518919 ASTLQ6HA08 431 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-212ENST00000518919 L3MBTL3Q96JM7 780 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-212ENST00000518919 ZMYND15Q9H091 742 aa8.38□□□□□ -1.07
CTNNA1-212ENST00000518919 TBC1D12O60347 775 aa8.37□□□□□ -1.07
CTNNA1-212ENST00000518919 PTGER2P43116 358 aa8.37□□□□□ -1.07
CTNNA1-212ENST00000518919 RSPH6AQ9H0K4 717 aa8.37□□□□□ -1.07
CTNNA1-212ENST00000518919 PLEKHG3A1L390 1219 aa8.36□□□□□ -1.07
CTNNA1-212ENST00000518919 HAX1O00165 279 aa8.36□□□□□ -1.07
CTNNA1-212ENST00000518919 TTLL12Q14166 644 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-212ENST00000518919 MYO15BQ96JP2 1530 aa8.35□□□□□ -1.07
CTNNA1-212ENST00000518919 TMEM92Q6UXU6 159 aa8.35□□□□□ -1.07
CTNNA1-212ENST00000518919 EVI5O60447 810 aa8.34□□□□□ -1.07
CTNNA1-212ENST00000518919 FECHP22830 423 aa8.34□□□□□ -1.07
CTNNA1-212ENST00000518919 PRIM1P49642 420 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-212ENST00000518919 PTGDRQ13258 359 aa8.32□□□□□ -1.08
CTNNA1-212ENST00000518919 SEC24BO95487 1268 aa8.31□□□□□ -1.08
CTNNA1-212ENST00000518919 ABCC9O60706 1549 aa8.3□□□□□ -1.08
CTNNA1-212ENST00000518919 EVX2Q03828 476 aa8.3□□□□□ -1.08
CTNNA1-212ENST00000518919 GIGYF2Q6Y7W6 1299 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-212ENST00000518919 FLIIQ13045 1269 aa8.29□□□□□ -1.08
CTNNA1-212ENST00000518919 GOPCQ9HD26 462 aa8.28□□□□□ -1.08
CTNNA1-212ENST00000518919 EN1Q05925 392 aaPredicted RBP8.26□□□□□ -1.09
CTNNA1-212ENST00000518919 C3orf67Q6ZVT6 689 aa8.26□□□□□ -1.09
CTNNA1-212ENST00000518919 PTCD2Q8WV60 388 aaKnown RBP8.26□□□□□ -1.09
CTNNA1-212ENST00000518919 PCMTD1Q96MG8 357 aaPredicted RBP8.26□□□□□ -1.09
CTNNA1-212ENST00000518919 CDHR5Q9HBB8 845 aa8.26□□□□□ -1.09
CTNNA1-212ENST00000518919 COLQQ9Y215 455 aaPredicted RBP8.26□□□□□ -1.09
CTNNA1-212ENST00000518919 MAP3K7O43318 606 aa8.25□□□□□ -1.09
CTNNA1-212ENST00000518919 MS4A1P11836 297 aa8.25□□□□□ -1.09
CTNNA1-212ENST00000518919 NACADO15069 1562 aa8.24□□□□□ -1.09
CTNNA1-212ENST00000518919 UBTFP17480 764 aaKnown RBP8.24□□□□□ -1.09
CTNNA1-212ENST00000518919 EPAS1Q99814 870 aa8.24□□□□□ -1.09
CTNNA1-212ENST00000518919 SCRIBQ14160 1630 aa8.24□□□□□ -1.09
CTNNA1-212ENST00000518919 PHF14O94880 888 aa8.23□□□□□ -1.09
CTNNA1-212ENST00000518919 CLCN1P35523 988 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms