RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 SIGLEC1Q9BZZ2 1709 aa19.85■□□□□ 0.77
MRPS28-202ENST00000518271 CDK11AQ9UQ88 783 aaPredicted RBP19.84■□□□□ 0.77
MRPS28-202ENST00000518271 POGZQ7Z3K3 1410 aa19.82■□□□□ 0.76
MRPS28-202ENST00000518271 ADAMTSL3P82987 1691 aa19.81■□□□□ 0.76
MRPS28-202ENST00000518271 ARHGAP5Q13017 1502 aa19.81■□□□□ 0.76
MRPS28-202ENST00000518271 BCORL1Q5H9F3 1711 aa19.79■□□□□ 0.76
MRPS28-202ENST00000518271 SCAPERQ9BY12 1400 aa19.78■□□□□ 0.76
MRPS28-202ENST00000518271 ZFYVE16Q7Z3T8 1539 aa19.78■□□□□ 0.76
MRPS28-202ENST00000518271 KDM5CP41229 1560 aa19.78■□□□□ 0.76
MRPS28-202ENST00000518271 ITSN2Q9NZM3 1697 aa19.78■□□□□ 0.76
MRPS28-202ENST00000518271 ABCC1P33527 1531 aa19.77■□□□□ 0.76
MRPS28-202ENST00000518271 YEATS2Q9ULM3 1422 aa19.76■□□□□ 0.75
MRPS28-202ENST00000518271 LOC105371045A0A1W2PR82 267 aa19.76■□□□□ 0.75
MRPS28-202ENST00000518271 EFCAB2Q5VUJ9 269 aa19.74■□□□□ 0.75
MRPS28-202ENST00000518271 ARHGEF12Q9NZN5 1544 aa19.74■□□□□ 0.75
MRPS28-202ENST00000518271 MAGI2Q86UL8 1455 aa19.73■□□□□ 0.75
MRPS28-202ENST00000518271 SAMD9LQ8IVG5 1584 aa19.73■□□□□ 0.75
MRPS28-202ENST00000518271 MADDQ8WXG6 1647 aa19.73■□□□□ 0.75
MRPS28-202ENST00000518271 EHBP1L1Q8N3D4 1523 aa19.72■□□□□ 0.75
MRPS28-202ENST00000518271 ZNF518AQ6AHZ1 1483 aa19.71■□□□□ 0.75
MRPS28-202ENST00000518271 GPATCH8Q9UKJ3 1502 aaKnown RBP19.71■□□□□ 0.75
MRPS28-202ENST00000518271 HECW2Q9P2P5 1572 aa19.7■□□□□ 0.74
MRPS28-202ENST00000518271 TIAM1Q13009 1591 aa19.7■□□□□ 0.74
MRPS28-202ENST00000518271 ABCA6Q8N139 1617 aa19.69■□□□□ 0.74
MRPS28-202ENST00000518271 DIP2CQ9Y2E4 1556 aa19.68■□□□□ 0.74
MRPS28-202ENST00000518271 VPS8Q8N3P4 1428 aa19.67■□□□□ 0.74
MRPS28-202ENST00000518271 TRAPPC8Q9Y2L5 1435 aa19.67■□□□□ 0.74
MRPS28-202ENST00000518271 KIDINS220Q9ULH0 1771 aa19.66■□□□□ 0.74
MRPS28-202ENST00000518271 RIMS1Q86UR5 1692 aaKnown RBP19.65■□□□□ 0.74
MRPS28-202ENST00000518271 MTUS2Q5JR59 1369 aa19.65■□□□□ 0.74
MRPS28-202ENST00000518271 SYCP2Q9BX26 1530 aa19.65■□□□□ 0.74
MRPS28-202ENST00000518271 REREQ9P2R6 1566 aa19.63■□□□□ 0.73
MRPS28-202ENST00000518271 PTPRMP28827 1452 aa19.63■□□□□ 0.73
MRPS28-202ENST00000518271 ATP10AO60312 1499 aa19.62■□□□□ 0.73
MRPS28-202ENST00000518271 MLH3Q9UHC1 1453 aa19.62■□□□□ 0.73
MRPS28-202ENST00000518271 C9orf84Q5VXU9 1444 aa19.62■□□□□ 0.73
MRPS28-202ENST00000518271 FER1L4A9Z1Z3 1794 aa19.62■□□□□ 0.73
MRPS28-202ENST00000518271 SUPT6HQ7KZ85 1726 aaKnown RBP19.62■□□□□ 0.73
MRPS28-202ENST00000518271 AFAP1Q8N556 730 aa19.61■□□□□ 0.73
MRPS28-202ENST00000518271 CCNB3Q8WWL7 1395 aa19.58■□□□□ 0.73
MRPS28-202ENST00000518271 INO80Q9ULG1 1556 aaPredicted RBP19.58■□□□□ 0.73
MRPS28-202ENST00000518271 ARID4BQ4LE39 1312 aaPredicted RBP19.57■□□□□ 0.72
MRPS28-202ENST00000518271 NCOA2Q15596 1464 aa19.57■□□□□ 0.72
MRPS28-202ENST00000518271 KIAA1107Q9UPP5 1409 aa19.56■□□□□ 0.72
MRPS28-202ENST00000518271 MAP3K1Q13233 1512 aa19.56■□□□□ 0.72
MRPS28-202ENST00000518271 LRRC9Q6ZRR7 1453 aa19.54■□□□□ 0.72
MRPS28-202ENST00000518271 PLEKHH2Q8IVE3 1493 aa19.54■□□□□ 0.72
MRPS28-202ENST00000518271 AGLP35573 1532 aa19.52■□□□□ 0.72
MRPS28-202ENST00000518271 ATP7AQ04656 1500 aa19.52■□□□□ 0.72
MRPS28-202ENST00000518271 MBD5Q9P267 1494 aa19.52■□□□□ 0.72
MRPS28-202ENST00000518271 CFDP1Q9UEE9 299 aaPredicted RBP19.51■□□□□ 0.71
MRPS28-202ENST00000518271 ZNF777Q9ULD5 760 aaPredicted RBP19.51■□□□□ 0.71
MRPS28-202ENST00000518271 ZNF644Q9H582 1327 aaPredicted RBP19.5■□□□□ 0.71
MRPS28-202ENST00000518271 PLXNC1O60486 1568 aa19.49■□□□□ 0.71
MRPS28-202ENST00000518271 HNRNPMP52272 730 aaKnown RBP eCLIP19.48■□□□□ 0.71
MRPS28-202ENST00000518271 CAMSAP2Q08AD1 1489 aa19.48■□□□□ 0.71
MRPS28-202ENST00000518271 ADGBQ8N7X0 1667 aa19.46■□□□□ 0.71
MRPS28-202ENST00000518271 MLECQ14165 292 aa19.45■□□□□ 0.7
MRPS28-202ENST00000518271 KANK4Q5T7N3 995 aaPredicted RBP19.45■□□□□ 0.7
MRPS28-202ENST00000518271 LMTK3Q96Q04 1460 aa19.45■□□□□ 0.7
MRPS28-202ENST00000518271 ARHGEF5Q12774 1597 aa19.43■□□□□ 0.7
MRPS28-202ENST00000518271 SPAG9O60271 1321 aaKnown RBP19.43■□□□□ 0.7
MRPS28-202ENST00000518271 C3P01024 1663 aa19.43■□□□□ 0.7
MRPS28-202ENST00000518271 CCDC141Q6ZP82 1450 aa19.41■□□□□ 0.7
MRPS28-202ENST00000518271 MYT1LQ9UL68 1186 aa19.4■□□□□ 0.7
MRPS28-202ENST00000518271 A2MP01023 1474 aa19.39■□□□□ 0.69
MRPS28-202ENST00000518271 PREX1Q8TCU6 1659 aa19.39■□□□□ 0.69
MRPS28-202ENST00000518271 MROH2AA6NES4 1674 aa19.38■□□□□ 0.69
MRPS28-202ENST00000518271 RTEL1-TNFRSF6BF6WH68 1400 aa19.37■□□□□ 0.69
MRPS28-202ENST00000518271 MYOM3Q5VTT5 1437 aa19.37■□□□□ 0.69
MRPS28-202ENST00000518271 MAST1Q9Y2H9 1570 aa19.35■□□□□ 0.69
MRPS28-202ENST00000518271 MIA2Q96PC5 1412 aa19.34■□□□□ 0.69
MRPS28-202ENST00000518271 SETD1BQ9UPS6 1966 aaKnown RBP19.33■□□□□ 0.69
MRPS28-202ENST00000518271 CLTCQ00610 1675 aaKnown RBP19.33■□□□□ 0.69
MRPS28-202ENST00000518271 CROCC2H7BZ55 1655 aa19.33■□□□□ 0.68
MRPS28-202ENST00000518271 CEBPAP49715 358 aaPredicted RBP19.31■□□□□ 0.68
MRPS28-202ENST00000518271 PLPPR3Q6T4P5 718 aa19.31■□□□□ 0.68
MRPS28-202ENST00000518271 PTPN23Q9H3S7 1636 aa19.3■□□□□ 0.68
MRPS28-202ENST00000518271 CNTLNQ9NXG0 1405 aa19.29■□□□□ 0.68
MRPS28-202ENST00000518271 DHX29Q7Z478 1369 aaKnown RBP19.26■□□□□ 0.67
MRPS28-202ENST00000518271 TCOF1Q13428 1488 aaKnown RBP19.25■□□□□ 0.67
MRPS28-202ENST00000518271 DNMT1P26358 1616 aaKnown RBP19.25■□□□□ 0.67
MRPS28-202ENST00000518271 FGD6Q6ZV73 1430 aa19.25■□□□□ 0.67
MRPS28-202ENST00000518271 HSPA2P54652 639 aa19.24■□□□□ 0.67
MRPS28-202ENST00000518271 RSPH4AQ5TD94 716 aa19.24■□□□□ 0.67
MRPS28-202ENST00000518271 RNF17Q9BXT8 1623 aaKnown RBP19.24■□□□□ 0.67
MRPS28-202ENST00000518271 STRCQ7RTU9 1775 aa19.24■□□□□ 0.67
MRPS28-202ENST00000518271 EIF2AK4Q9P2K8 1649 aaKnown RBP19.22■□□□□ 0.67
MRPS28-202ENST00000518271 SHANK2Q9UPX8 1470 aa19.22■□□□□ 0.67
MRPS28-202ENST00000518271 MROH1Q8NDA8 1641 aa19.21■□□□□ 0.67
MRPS28-202ENST00000518271 MYO3AQ8NEV4 1616 aa19.21■□□□□ 0.67
MRPS28-202ENST00000518271 ZNF142P52746 1687 aaPredicted RBP19.2■□□□□ 0.66
MRPS28-202ENST00000518271 FAM135AQ9P2D6 1515 aa19.2■□□□□ 0.66
MRPS28-202ENST00000518271 ABCC5O15440 1437 aa19.2■□□□□ 0.66
MRPS28-202ENST00000518271 NPATQ14207 1427 aa19.2■□□□□ 0.66
MRPS28-202ENST00000518271 UHRF1BP1Q6BDS2 1440 aa19.2■□□□□ 0.66
MRPS28-202ENST00000518271 APLP2Q06481 763 aa19.2■□□□□ 0.66
MRPS28-202ENST00000518271 ZMYM3Q14202 1370 aa19.19■□□□□ 0.66
MRPS28-202ENST00000518271 PTPRKQ15262 1439 aa19.18■□□□□ 0.66
MRPS28-202ENST00000518271 KDM5DQ9BY66 1539 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms