RNA–Protein interactions for RNA: ENST00000518265.5

SRGAP3-211, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 1,799 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-211ENST00000518265 RIMBP3CA6NJZ7 1639 aa12.43□□□□□ -0.42
SRGAP3-211ENST00000518265 RIMBP3BA6NNM3 1639 aa12.43□□□□□ -0.42
SRGAP3-211ENST00000518265 RIMBP3Q9UFD9 1639 aa12.43□□□□□ -0.42
SRGAP3-211ENST00000518265 FMN1Q68DA7 1419 aa12.42□□□□□ -0.42
SRGAP3-211ENST00000518265 CDK13Q14004 1512 aaKnown RBP12.42□□□□□ -0.42
SRGAP3-211ENST00000518265 CFAP43Q8NDM7 1665 aa12.42□□□□□ -0.42
SRGAP3-211ENST00000518265 ARHGEF11O15085 1522 aa12.41□□□□□ -0.42
SRGAP3-211ENST00000518265 HECW1Q76N89 1606 aa12.4□□□□□ -0.42
SRGAP3-211ENST00000518265 SPRYD3Q8NCJ5 442 aa12.4□□□□□ -0.42
SRGAP3-211ENST00000518265 PTPRGP23470 1445 aa12.4□□□□□ -0.42
SRGAP3-211ENST00000518265 CASKIN1Q8WXD9 1431 aa12.4□□□□□ -0.42
SRGAP3-211ENST00000518265 FYCO1Q9BQS8 1478 aa12.39□□□□□ -0.43
SRGAP3-211ENST00000518265 TIAM1Q13009 1591 aa12.39□□□□□ -0.43
SRGAP3-211ENST00000518265 KANK4Q5T7N3 995 aaPredicted RBP12.39□□□□□ -0.43
SRGAP3-211ENST00000518265 ABCA8O94911 1581 aa12.39□□□□□ -0.43
SRGAP3-211ENST00000518265 SPOCK2Q92563 424 aa12.38□□□□□ -0.43
SRGAP3-211ENST00000518265 NUP153P49790 1475 aaKnown RBP12.37□□□□□ -0.43
SRGAP3-211ENST00000518265 KLHL34Q8N239 644 aa12.37□□□□□ -0.43
SRGAP3-211ENST00000518265 ADCY10Q96PN6 1610 aa12.36□□□□□ -0.43
SRGAP3-211ENST00000518265 EPRSP07814 1512 aaKnown RBP12.35□□□□□ -0.43
SRGAP3-211ENST00000518265 MAGI3Q5TCQ9 1506 aa12.35□□□□□ -0.43
SRGAP3-211ENST00000518265 GTF3C3Q9Y5Q9 886 aa12.34□□□□□ -0.43
SRGAP3-211ENST00000518265 ZCCHC11Q5TAX3 1644 aaKnown RBP12.33□□□□□ -0.44
SRGAP3-211ENST00000518265 UACAQ9BZF9 1416 aa12.32□□□□□ -0.44
SRGAP3-211ENST00000518265 CYB5RLQ6IPT4 315 aa12.32□□□□□ -0.44
SRGAP3-211ENST00000518265 NBR1Q14596 966 aa12.31□□□□□ -0.44
SRGAP3-211ENST00000518265 ABCC2Q92887 1545 aa12.31□□□□□ -0.44
SRGAP3-211ENST00000518265 ATP10BO94823 1461 aa12.3□□□□□ -0.44
SRGAP3-211ENST00000518265 LRRC9Q6ZRR7 1453 aa12.3□□□□□ -0.44
SRGAP3-211ENST00000518265 KIF14Q15058 1648 aa12.29□□□□□ -0.44
SRGAP3-211ENST00000518265 CCDC18Q5T9S5 1454 aa12.28□□□□□ -0.44
SRGAP3-211ENST00000518265 SUPT6HQ7KZ85 1726 aaKnown RBP12.26□□□□□ -0.45
SRGAP3-211ENST00000518265 DNAJC5Q9H3Z4 198 aa12.26□□□□□ -0.45
SRGAP3-211ENST00000518265 MTUS2Q5JR59 1369 aa12.26□□□□□ -0.45
SRGAP3-211ENST00000518265 CHGAP10645 457 aaKnown RBP12.25□□□□□ -0.45
SRGAP3-211ENST00000518265 MAP3K1Q13233 1512 aa12.25□□□□□ -0.45
SRGAP3-211ENST00000518265 ARXQ96QS3 562 aa12.25□□□□□ -0.45
SRGAP3-211ENST00000518265 EHBP1L1Q8N3D4 1523 aa12.24□□□□□ -0.45
SRGAP3-211ENST00000518265 UHRF1BP1LA0JNW5 1464 aa12.23□□□□□ -0.45
SRGAP3-211ENST00000518265 KCNH8Q96L42 1107 aa12.22□□□□□ -0.45
SRGAP3-211ENST00000518265 KDM5BQ9UGL1 1544 aa12.22□□□□□ -0.45
SRGAP3-211ENST00000518265 POLA2Q14181 598 aa12.21□□□□□ -0.45
SRGAP3-211ENST00000518265 PCGF6Q9BYE7 350 aa12.21□□□□□ -0.45
SRGAP3-211ENST00000518265 PHLDB1Q86UU1 1377 aa12.21□□□□□ -0.45
SRGAP3-211ENST00000518265 NCOA2Q15596 1464 aa12.21□□□□□ -0.46
SRGAP3-211ENST00000518265 CDC42BPAQ5VT25 1732 aa12.21□□□□□ -0.46
SRGAP3-211ENST00000518265 TTC37Q6PGP7 1564 aa12.19□□□□□ -0.46
SRGAP3-211ENST00000518265 PLEKHD1A6NEE1 506 aa12.18□□□□□ -0.46
SRGAP3-211ENST00000518265 TROQ12816 1431 aaPredicted RBP12.18□□□□□ -0.46
SRGAP3-211ENST00000518265 TRHP20396 242 aaPredicted RBP12.18□□□□□ -0.46
SRGAP3-211ENST00000518265 CDC42BPBQ9Y5S2 1711 aa12.17□□□□□ -0.46
SRGAP3-211ENST00000518265 TSPOAP1O95153 1857 aa12.16□□□□□ -0.46
SRGAP3-211ENST00000518265 CDK11AQ9UQ88 783 aaPredicted RBP12.16□□□□□ -0.46
SRGAP3-211ENST00000518265 TRIM26Q12899 539 aaPredicted RBP12.15□□□□□ -0.46
SRGAP3-211ENST00000518265 ASXL2Q76L83 1435 aa12.15□□□□□ -0.46
SRGAP3-211ENST00000518265 MYO5CQ9NQX4 1742 aa12.15□□□□□ -0.46
SRGAP3-211ENST00000518265 SPINK5Q9NQ38 1064 aaPredicted RBP12.15□□□□□ -0.46
SRGAP3-211ENST00000518265 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.14□□□□□ -0.47
SRGAP3-211ENST00000518265 ITGAEP38570 1179 aa12.14□□□□□ -0.47
SRGAP3-211ENST00000518265 PTPN23Q9H3S7 1636 aa12.13□□□□□ -0.47
SRGAP3-211ENST00000518265 ITSN2Q9NZM3 1697 aa12.13□□□□□ -0.47
SRGAP3-211ENST00000518265 WDR7Q9Y4E6 1490 aa12.13□□□□□ -0.47
SRGAP3-211ENST00000518265 FAM50AQ14320 339 aaKnown RBP12.13□□□□□ -0.47
SRGAP3-211ENST00000518265 ABCC10Q5T3U5 1492 aa12.12□□□□□ -0.47
SRGAP3-211ENST00000518265 KIF13AQ9H1H9 1805 aa12.11□□□□□ -0.47
SRGAP3-211ENST00000518265 TMEM132AQ24JP5 1023 aa12.11□□□□□ -0.47
SRGAP3-211ENST00000518265 PLCD3Q8N3E9 789 aa12.11□□□□□ -0.47
SRGAP3-211ENST00000518265 PREX2Q70Z35 1606 aa12.11□□□□□ -0.47
SRGAP3-211ENST00000518265 ZNF777Q9ULD5 760 aaPredicted RBP12.1□□□□□ -0.47
SRGAP3-211ENST00000518265 ZNF644Q9H582 1327 aaPredicted RBP12.1□□□□□ -0.47
SRGAP3-211ENST00000518265 CCNB3Q8WWL7 1395 aa12.1□□□□□ -0.47
SRGAP3-211ENST00000518265 MYOM3Q5VTT5 1437 aa12.1□□□□□ -0.47
SRGAP3-211ENST00000518265 FGD6Q6ZV73 1430 aa12.1□□□□□ -0.47
SRGAP3-211ENST00000518265 GPATCH8Q9UKJ3 1502 aaKnown RBP12.09□□□□□ -0.47
SRGAP3-211ENST00000518265 RRBP1Q9P2E9 1410 aaKnown RBP12.08□□□□□ -0.48
SRGAP3-211ENST00000518265 ABCA9Q8IUA7 1624 aa12.08□□□□□ -0.48
SRGAP3-211ENST00000518265 CIZ1Q9ULV3 898 aaPredicted RBP12.07□□□□□ -0.48
SRGAP3-211ENST00000518265 MAPKBP1O60336 1514 aa12.07□□□□□ -0.48
SRGAP3-211ENST00000518265 EIF5BO60841 1220 aaKnown RBP12.07□□□□□ -0.48
SRGAP3-211ENST00000518265 ARHGAP5Q13017 1502 aa12.07□□□□□ -0.48
SRGAP3-211ENST00000518265 SAMD9LQ8IVG5 1584 aa12.06□□□□□ -0.48
SRGAP3-211ENST00000518265 DIP2BQ9P265 1576 aa12.05□□□□□ -0.48
SRGAP3-211ENST00000518265 CFDP1Q9UEE9 299 aaPredicted RBP12.05□□□□□ -0.48
SRGAP3-211ENST00000518265 CAMSAP2Q08AD1 1489 aa12.05□□□□□ -0.48
SRGAP3-211ENST00000518265 MAP3K4Q9Y6R4 1608 aa12.03□□□□□ -0.48
SRGAP3-211ENST00000518265 HS6ST3Q8IZP7 471 aa12.02□□□□□ -0.48
SRGAP3-211ENST00000518265 PPRC1Q5VV67 1664 aaKnown RBP12.02□□□□□ -0.49
SRGAP3-211ENST00000518265 FAM69CQ0P6D2 419 aa12.02□□□□□ -0.49
SRGAP3-211ENST00000518265 BCL11AQ9H165 835 aa12.02□□□□□ -0.49
SRGAP3-211ENST00000518265 CHIC2Q9UKJ5 165 aa12.02□□□□□ -0.49
SRGAP3-211ENST00000518265 CROCC2H7BZ55 1655 aa12.01□□□□□ -0.49
SRGAP3-211ENST00000518265 PTPRKQ15262 1439 aa12.01□□□□□ -0.49
SRGAP3-211ENST00000518265 MIER1Q8N108 512 aa12.01□□□□□ -0.49
SRGAP3-211ENST00000518265 SYCP2Q9BX26 1530 aa12.01□□□□□ -0.49
SRGAP3-211ENST00000518265 HNRNPMP52272 730 aaKnown RBP eCLIP12□□□□□ -0.49
SRGAP3-211ENST00000518265 STAG3Q9UJ98 1225 aa12□□□□□ -0.49
SRGAP3-211ENST00000518265 TCOF1Q13428 1488 aaKnown RBP12□□□□□ -0.49
SRGAP3-211ENST00000518265 NKX1-1Q15270 411 aaPredicted RBP12□□□□□ -0.49
SRGAP3-211ENST00000518265 DNMT1P26358 1616 aaKnown RBP11.99□□□□□ -0.49
SRGAP3-211ENST00000518265 PLCH2O75038 1416 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms