RNA–Protein interactions for RNA: ENST00000518081.1

EFCAB13-204, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-204ENST00000518081 POTEFA5A3E0 1075 aa14.77□□□□□ -0.05
EFCAB13-204ENST00000518081 MFSD10Q14728 455 aa14.77□□□□□ -0.05
EFCAB13-204ENST00000518081 TMEM121BQ9BXQ6 578 aaPredicted RBP14.77□□□□□ -0.05
EFCAB13-204ENST00000518081 E2F4Q16254 413 aa14.74□□□□□ -0.05
EFCAB13-204ENST00000518081 L3MBTL3Q96JM7 780 aaPredicted RBP14.74□□□□□ -0.05
EFCAB13-204ENST00000518081 METRNQ9UJH8 293 aa14.74□□□□□ -0.05
EFCAB13-204ENST00000518081 G3V3G9 751 aa14.73□□□□□ -0.05
EFCAB13-204ENST00000518081 DDX27Q96GQ7 796 aaKnown RBP14.73□□□□□ -0.05
EFCAB13-204ENST00000518081 GPHNQ9NQX3 736 aaPredicted RBP14.73□□□□□ -0.05
EFCAB13-204ENST00000518081 TMC2Q8TDI7 906 aa14.66□□□□□ -0.06
EFCAB13-204ENST00000518081 PPP1R15BQ5SWA1 713 aa14.65□□□□□ -0.06
EFCAB13-204ENST00000518081 ARHGEF1Q92888 912 aaKnown RBP14.65□□□□□ -0.06
EFCAB13-204ENST00000518081 CAMK2BQ13554 666 aa14.63□□□□□ -0.07
EFCAB13-204ENST00000518081 DSG2Q14126 1118 aa14.63□□□□□ -0.07
EFCAB13-204ENST00000518081 KIF3CO14782 793 aa14.62□□□□□ -0.07
EFCAB13-204ENST00000518081 C2orf72A6NCS6 295 aa14.61□□□□□ -0.07
EFCAB13-204ENST00000518081 FOXK1P85037 733 aa14.6□□□□□ -0.07
EFCAB13-204ENST00000518081 TMEM92Q6UXU6 159 aa14.6□□□□□ -0.07
EFCAB13-204ENST00000518081 PRKCSHP14314 528 aaPredicted RBP14.56□□□□□ -0.08
EFCAB13-204ENST00000518081 ARIH1Q9Y4X5 557 aaPredicted RBP14.56□□□□□ -0.08
EFCAB13-204ENST00000518081 PLPP6Q8IY26 295 aa14.55□□□□□ -0.08
EFCAB13-204ENST00000518081 TPRNQ4KMQ1 711 aa14.52□□□□□ -0.09
EFCAB13-204ENST00000518081 C3orf67Q6ZVT6 689 aa14.51□□□□□ -0.09
EFCAB13-204ENST00000518081 EMILIN3Q9NT22 766 aa14.51□□□□□ -0.09
EFCAB13-204ENST00000518081 SEMA3EO15041 775 aa14.48□□□□□ -0.09
EFCAB13-204ENST00000518081 TESPA1A2RU30 521 aaPredicted RBP14.44□□□□□ -0.1
EFCAB13-204ENST00000518081 DPYSL4O14531 572 aa14.44□□□□□ -0.1
EFCAB13-204ENST00000518081 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.44□□□□□ -0.1
EFCAB13-204ENST00000518081 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.42□□□□□ -0.1
EFCAB13-204ENST00000518081 POTEB2H3BUK9 544 aa14.41□□□□□ -0.1
EFCAB13-204ENST00000518081 POTEJP0CG39 1038 aa14.41□□□□□ -0.1
EFCAB13-204ENST00000518081 LMOD2Q6P5Q4 547 aa14.37□□□□□ -0.11
EFCAB13-204ENST00000518081 SPDYE16A6NNV3 312 aaPredicted RBP14.36□□□□□ -0.11
EFCAB13-204ENST00000518081 TULP1O00294 542 aaPredicted RBP14.36□□□□□ -0.11
EFCAB13-204ENST00000518081 OXER1Q8TDS5 423 aa14.36□□□□□ -0.11
EFCAB13-204ENST00000518081 UPF1Q92900 1129 aaKnown RBP eCLIP14.36□□□□□ -0.11
EFCAB13-204ENST00000518081 MAP3K9P80192 1104 aa14.35□□□□□ -0.11
EFCAB13-204ENST00000518081 PDIA6Q15084 440 aa14.35□□□□□ -0.11
EFCAB13-204ENST00000518081 MLLT3P42568 568 aaPredicted RBP14.32□□□□□ -0.12
EFCAB13-204ENST00000518081 SMYD5Q6GMV2 418 aa14.32□□□□□ -0.12
EFCAB13-204ENST00000518081 SLC34A2O95436 690 aa14.28□□□□□ -0.12
EFCAB13-204ENST00000518081 PTCD2Q8WV60 388 aaKnown RBP14.28□□□□□ -0.12
EFCAB13-204ENST00000518081 TBC1D12O60347 775 aa14.25□□□□□ -0.13
EFCAB13-204ENST00000518081 MAMSTRQ6ZN01 415 aa14.24□□□□□ -0.13
EFCAB13-204ENST00000518081 SLAIN1Q8ND83 568 aa14.23□□□□□ -0.13
EFCAB13-204ENST00000518081 SCUBE2Q9NQ36 999 aa14.23□□□□□ -0.13
EFCAB13-204ENST00000518081 EVI5O60447 810 aa14.22□□□□□ -0.13
EFCAB13-204ENST00000518081 RBM26Q5T8P6 1007 aaKnown RBP14.2□□□□□ -0.14
EFCAB13-204ENST00000518081 ZC3H15Q8WU90 426 aaKnown RBP14.19□□□□□ -0.14
EFCAB13-204ENST00000518081 GRXCR2A6NFK2 248 aa14.18□□□□□ -0.14
EFCAB13-204ENST00000518081 PTGER2P43116 358 aa14.18□□□□□ -0.14
EFCAB13-204ENST00000518081 PCDHGA4Q9Y5G9 962 aa14.17□□□□□ -0.14
EFCAB13-204ENST00000518081 ANO8Q9HCE9 1232 aaPredicted RBP14.16□□□□□ -0.14
EFCAB13-204ENST00000518081 HOXB3P14651 431 aaPredicted RBP14.14□□□□□ -0.15
EFCAB13-204ENST00000518081 DDX12PQ92771 950 aa14.14□□□□□ -0.15
EFCAB13-204ENST00000518081 ZNF316A6NFI3 1004 aaPredicted RBP14.12□□□□□ -0.15
EFCAB13-204ENST00000518081 OSBPP22059 807 aa14.12□□□□□ -0.15
EFCAB13-204ENST00000518081 DOK7Q18PE1 504 aa14.11□□□□□ -0.15
EFCAB13-204ENST00000518081 KDM4FA0A1W2PPD8 638 aa14.08□□□□□ -0.16
EFCAB13-204ENST00000518081 GPIHBP1Q8IV16 184 aa14.08□□□□□ -0.16
EFCAB13-204ENST00000518081 ZMYND10O75800 440 aa14.07□□□□□ -0.16
EFCAB13-204ENST00000518081 OTUD5Q96G74 571 aa14.07□□□□□ -0.16
EFCAB13-204ENST00000518081 ARSIQ5FYB1 569 aa14.06□□□□□ -0.16
EFCAB13-204ENST00000518081 KHSRPQ92945 711 aaKnown RBP eCLIP14.05□□□□□ -0.16
EFCAB13-204ENST00000518081 RIMBP2O15034 1052 aa14.04□□□□□ -0.16
EFCAB13-204ENST00000518081 PRIM1P49642 420 aaKnown RBP14.04□□□□□ -0.16
EFCAB13-204ENST00000518081 GPR153Q6NV75 609 aa14.04□□□□□ -0.16
EFCAB13-204ENST00000518081 ZSWIM6Q9HCJ5 1215 aa14.04□□□□□ -0.16
EFCAB13-204ENST00000518081 LHX8Q68G74 356 aa14.03□□□□□ -0.16
EFCAB13-204ENST00000518081 PHF14O94880 888 aa14.02□□□□□ -0.17
EFCAB13-204ENST00000518081 NUDT7P0C024 238 aa14.02□□□□□ -0.17
EFCAB13-204ENST00000518081 NUTM2FA1L443 756 aa14.01□□□□□ -0.17
EFCAB13-204ENST00000518081 BARGINQ6ZT62 677 aa14.01□□□□□ -0.17
EFCAB13-204ENST00000518081 ZNF710Q8N1W2 664 aa14.01□□□□□ -0.17
EFCAB13-204ENST00000518081 EPAS1Q99814 870 aa14□□□□□ -0.17
EFCAB13-204ENST00000518081 SNPHO15079 494 aa13.99□□□□□ -0.17
EFCAB13-204ENST00000518081 GPR37O15354 613 aa13.99□□□□□ -0.17
EFCAB13-204ENST00000518081 SLC24A3Q9HC58 644 aa13.99□□□□□ -0.17
EFCAB13-204ENST00000518081 PCDHGA10Q9Y5H3 936 aa13.99□□□□□ -0.17
EFCAB13-204ENST00000518081 FOSBP53539 338 aa13.95□□□□□ -0.18
EFCAB13-204ENST00000518081 TYW1BQ6NUM6 668 aa13.95□□□□□ -0.18
EFCAB13-204ENST00000518081 JPH4Q96JJ6 628 aa13.95□□□□□ -0.18
EFCAB13-204ENST00000518081 EN1Q05925 392 aaPredicted RBP13.94□□□□□ -0.18
EFCAB13-204ENST00000518081 RBM33Q96EV2 1170 aaKnown RBP13.93□□□□□ -0.18
EFCAB13-204ENST00000518081 FCHSD2O94868 740 aa13.91□□□□□ -0.18
EFCAB13-204ENST00000518081 ZNF454Q8N9F8 522 aa13.91□□□□□ -0.18
EFCAB13-204ENST00000518081 KRI1Q8N9T8 703 aaKnown RBP13.91□□□□□ -0.18
EFCAB13-204ENST00000518081 LHX6Q9UPM6 363 aa13.91□□□□□ -0.18
EFCAB13-204ENST00000518081 MAP3K7O43318 606 aa13.9□□□□□ -0.18
EFCAB13-204ENST00000518081 HOXB1P14653 301 aaPredicted RBP13.9□□□□□ -0.18
EFCAB13-204ENST00000518081 FBXW7Q969H0 707 aa13.9□□□□□ -0.18
EFCAB13-204ENST00000518081 PTGDRQ13258 359 aa13.88□□□□□ -0.19
EFCAB13-204ENST00000518081 ZDHHC16Q969W1 377 aa13.88□□□□□ -0.19
EFCAB13-204ENST00000518081 CDHR5Q9HBB8 845 aa13.88□□□□□ -0.19
EFCAB13-204ENST00000518081 GNPATO15228 680 aa13.87□□□□□ -0.19
EFCAB13-204ENST00000518081 HIC1Q14526 733 aa13.87□□□□□ -0.19
EFCAB13-204ENST00000518081 TSR1Q2NL82 804 aaKnown RBP13.87□□□□□ -0.19
EFCAB13-204ENST00000518081 NPDC1Q9NQX5 325 aaPredicted RBP13.87□□□□□ -0.19
EFCAB13-204ENST00000518081 AK7Q96M32 723 aa13.86□□□□□ -0.19
EFCAB13-204ENST00000518081 FECHP22830 423 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms