RNA–Protein interactions for RNA: ENST00000517745.1

NDRG1-205, Transcript of N-myc downstream regulated 1, humanhuman

TSL 3

Gene NDRG1, Length 391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-205ENST00000517745 TROQ12816 1431 aaPredicted RBP23.42■■□□□ 1.34
NDRG1-205ENST00000517745 YEATS2Q9ULM3 1422 aa23.42■■□□□ 1.34
NDRG1-205ENST00000517745 RIMS1Q86UR5 1692 aaKnown RBP23.42■■□□□ 1.34
NDRG1-205ENST00000517745 MAGI2Q86UL8 1455 aa23.42■■□□□ 1.34
NDRG1-205ENST00000517745 LRRIQ1Q96JM4 1722 aa23.41■■□□□ 1.34
NDRG1-205ENST00000517745 ILDR1Q86SU0 546 aaPredicted RBP23.4■■□□□ 1.34
NDRG1-205ENST00000517745 EFCAB2Q5VUJ9 269 aa23.39■■□□□ 1.33
NDRG1-205ENST00000517745 PCF11O94913 1555 aaKnown RBP23.39■■□□□ 1.33
NDRG1-205ENST00000517745 ARHGAP5Q13017 1502 aa23.38■■□□□ 1.33
NDRG1-205ENST00000517745 SIGLEC1Q9BZZ2 1709 aa23.36■■□□□ 1.33
NDRG1-205ENST00000517745 CCDC18Q5T9S5 1454 aa23.36■■□□□ 1.33
NDRG1-205ENST00000517745 CASKIN1Q8WXD9 1431 aa23.34■■□□□ 1.33
NDRG1-205ENST00000517745 MLECQ14165 292 aa23.32■■□□□ 1.32
NDRG1-205ENST00000517745 PLPPR3Q6T4P5 718 aa23.32■■□□□ 1.32
NDRG1-205ENST00000517745 ZNF518AQ6AHZ1 1483 aa23.31■■□□□ 1.32
NDRG1-205ENST00000517745 C9orf84Q5VXU9 1444 aa23.31■■□□□ 1.32
NDRG1-205ENST00000517745 ATP10AO60312 1499 aa23.3■■□□□ 1.32
NDRG1-205ENST00000517745 FER1L4A9Z1Z3 1794 aa23.29■■□□□ 1.32
NDRG1-205ENST00000517745 LMTK3Q96Q04 1460 aa23.29■■□□□ 1.32
NDRG1-205ENST00000517745 FYCO1Q9BQS8 1478 aa23.28■■□□□ 1.32
NDRG1-205ENST00000517745 PREX2Q70Z35 1606 aa23.27■■□□□ 1.32
NDRG1-205ENST00000517745 MYT1LQ9UL68 1186 aa23.27■■□□□ 1.32
NDRG1-205ENST00000517745 CDC42BPBQ9Y5S2 1711 aa23.27■■□□□ 1.32
NDRG1-205ENST00000517745 KDM5CP41229 1560 aa23.27■■□□□ 1.32
NDRG1-205ENST00000517745 AFAP1Q8N556 730 aa23.23■■□□□ 1.31
NDRG1-205ENST00000517745 ARHGEF12Q9NZN5 1544 aa23.22■■□□□ 1.31
NDRG1-205ENST00000517745 ABCC1P33527 1531 aa23.21■■□□□ 1.31
NDRG1-205ENST00000517745 DIP2CQ9Y2E4 1556 aa23.19■■□□□ 1.3
NDRG1-205ENST00000517745 ITSN2Q9NZM3 1697 aa23.19■■□□□ 1.3
NDRG1-205ENST00000517745 CDC42BPAQ5VT25 1732 aa23.18■■□□□ 1.3
NDRG1-205ENST00000517745 ABCA6Q8N139 1617 aa23.16■■□□□ 1.3
NDRG1-205ENST00000517745 TRAPPC8Q9Y2L5 1435 aa23.16■■□□□ 1.3
NDRG1-205ENST00000517745 HSPA2P54652 639 aa23.15■■□□□ 1.3
NDRG1-205ENST00000517745 MLH3Q9UHC1 1453 aa23.15■■□□□ 1.3
NDRG1-205ENST00000517745 REREQ9P2R6 1566 aa23.14■■□□□ 1.29
NDRG1-205ENST00000517745 ZNF777Q9ULD5 760 aaPredicted RBP23.11■■□□□ 1.29
NDRG1-205ENST00000517745 SAMD9LQ8IVG5 1584 aa23.09■■□□□ 1.29
NDRG1-205ENST00000517745 PREX1Q8TCU6 1659 aa23.09■■□□□ 1.29
NDRG1-205ENST00000517745 SYCP2Q9BX26 1530 aa23.08■■□□□ 1.28
NDRG1-205ENST00000517745 KIDINS220Q9ULH0 1771 aa23.07■■□□□ 1.28
NDRG1-205ENST00000517745 CEBPAP49715 358 aaPredicted RBP23.07■■□□□ 1.28
NDRG1-205ENST00000517745 FBXO41Q8TF61 875 aa23.07■■□□□ 1.28
NDRG1-205ENST00000517745 GPATCH8Q9UKJ3 1502 aaKnown RBP23.07■■□□□ 1.28
NDRG1-205ENST00000517745 MTUS2Q5JR59 1369 aa23.06■■□□□ 1.28
NDRG1-205ENST00000517745 AGLP35573 1532 aa23.06■■□□□ 1.28
NDRG1-205ENST00000517745 CCNB3Q8WWL7 1395 aa23.04■■□□□ 1.28
NDRG1-205ENST00000517745 ESF1Q9H501 851 aaKnown RBP23.04■■□□□ 1.28
NDRG1-205ENST00000517745 UHRF1BP1Q6BDS2 1440 aa23.01■■□□□ 1.27
NDRG1-205ENST00000517745 PLEKHH2Q8IVE3 1493 aa23.01■■□□□ 1.27
NDRG1-205ENST00000517745 CFDP1Q9UEE9 299 aaPredicted RBP23.01■■□□□ 1.27
NDRG1-205ENST00000517745 SPAG9O60271 1321 aaKnown RBP23■■□□□ 1.27
NDRG1-205ENST00000517745 C3P01024 1663 aa23■■□□□ 1.27
NDRG1-205ENST00000517745 CEP162Q5TB80 1403 aa22.99■■□□□ 1.27
NDRG1-205ENST00000517745 EHBP1L1Q8N3D4 1523 aa22.99■■□□□ 1.27
NDRG1-205ENST00000517745 HNRNPMP52272 730 aaKnown RBP eCLIP22.99■■□□□ 1.27
NDRG1-205ENST00000517745 ATP7AQ04656 1500 aa22.98■■□□□ 1.27
NDRG1-205ENST00000517745 KIAA1107Q9UPP5 1409 aa22.97■■□□□ 1.27
NDRG1-205ENST00000517745 TIAM1Q13009 1591 aa22.95■■□□□ 1.26
NDRG1-205ENST00000517745 CNTLNQ9NXG0 1405 aa22.95■■□□□ 1.26
NDRG1-205ENST00000517745 INO80Q9ULG1 1556 aaPredicted RBP22.94■■□□□ 1.26
NDRG1-205ENST00000517745 SUPT6HQ7KZ85 1726 aaKnown RBP22.94■■□□□ 1.26
NDRG1-205ENST00000517745 SETD1BQ9UPS6 1966 aaKnown RBP22.92■■□□□ 1.26
NDRG1-205ENST00000517745 A2MP01023 1474 aa22.89■■□□□ 1.25
NDRG1-205ENST00000517745 PLXNC1O60486 1568 aa22.89■■□□□ 1.25
NDRG1-205ENST00000517745 MROH2AA6NES4 1674 aa22.88■■□□□ 1.25
NDRG1-205ENST00000517745 STRCQ7RTU9 1775 aa22.87■■□□□ 1.25
NDRG1-205ENST00000517745 CERKQ8TCT0 537 aa22.86■■□□□ 1.25
NDRG1-205ENST00000517745 DMRT2Q9Y5R5 561 aa22.86■■□□□ 1.25
NDRG1-205ENST00000517745 ZNF644Q9H582 1327 aaPredicted RBP22.85■■□□□ 1.25
NDRG1-205ENST00000517745 ADGBQ8N7X0 1667 aa22.85■■□□□ 1.25
NDRG1-205ENST00000517745 CLTCQ00610 1675 aaKnown RBP22.84■■□□□ 1.25
NDRG1-205ENST00000517745 NCOA2Q15596 1464 aa22.82■■□□□ 1.24
NDRG1-205ENST00000517745 NPATQ14207 1427 aa22.82■■□□□ 1.24
NDRG1-205ENST00000517745 MBD5Q9P267 1494 aa22.81■■□□□ 1.24
NDRG1-205ENST00000517745 ZMYM3Q14202 1370 aa22.81■■□□□ 1.24
NDRG1-205ENST00000517745 GGT6Q6P531 493 aa22.8■■□□□ 1.24
NDRG1-205ENST00000517745 CAMSAP2Q08AD1 1489 aa22.79■■□□□ 1.24
NDRG1-205ENST00000517745 RTEL1-TNFRSF6BF6WH68 1400 aa22.77■■□□□ 1.24
NDRG1-205ENST00000517745 CCDC141Q6ZP82 1450 aa22.77■■□□□ 1.24
NDRG1-205ENST00000517745 PTPRTO14522 1441 aa22.76■■□□□ 1.23
NDRG1-205ENST00000517745 NCOA1Q15788 1441 aa22.75■■□□□ 1.23
NDRG1-205ENST00000517745 VPS8Q8N3P4 1428 aa22.75■■□□□ 1.23
NDRG1-205ENST00000517745 CAMSAP1Q5T5Y3 1602 aa22.74■■□□□ 1.23
NDRG1-205ENST00000517745 MYO3AQ8NEV4 1616 aa22.74■■□□□ 1.23
NDRG1-205ENST00000517745 LOC105371045A0A1W2PR82 267 aa22.72■■□□□ 1.23
NDRG1-205ENST00000517745 PPP6R1Q9UPN7 881 aa22.71■■□□□ 1.23
NDRG1-205ENST00000517745 DHX29Q7Z478 1369 aaKnown RBP22.71■■□□□ 1.23
NDRG1-205ENST00000517745 PTPRKQ15262 1439 aa22.71■■□□□ 1.23
NDRG1-205ENST00000517745 ZNF142P52746 1687 aaPredicted RBP22.71■■□□□ 1.23
NDRG1-205ENST00000517745 CEP170BQ9Y4F5 1589 aaPredicted RBP22.69■■□□□ 1.22
NDRG1-205ENST00000517745 LRRC9Q6ZRR7 1453 aa22.69■■□□□ 1.22
NDRG1-205ENST00000517745 RSPH4AQ5TD94 716 aa22.68■■□□□ 1.22
NDRG1-205ENST00000517745 ARHGEF5Q12774 1597 aa22.67■■□□□ 1.22
NDRG1-205ENST00000517745 KIF3BO15066 747 aa22.66■■□□□ 1.22
NDRG1-205ENST00000517745 KDM5DQ9BY66 1539 aa22.64■■□□□ 1.21
NDRG1-205ENST00000517745 PLA2R1Q13018 1463 aa22.63■■□□□ 1.21
NDRG1-205ENST00000517745 TSPY4P0CV99 314 aa22.63■■□□□ 1.21
NDRG1-205ENST00000517745 TSPY10P0CW01 314 aa22.63■■□□□ 1.21
NDRG1-205ENST00000517745 FAM135AQ9P2D6 1515 aa22.62■■□□□ 1.21
NDRG1-205ENST00000517745 NCKAP5LQ9HCH0 1330 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms