RNA–Protein interactions for RNA: ENST00000517479.1

CDK16-209, Transcript of cyclin dependent kinase 16, humanhuman

TSL 4

Gene CDK16, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-209ENST00000517479 ARHGEF40Q8TER5 1519 aa23.62■■□□□ 1.37
CDK16-209ENST00000517479 ARHGAP5Q13017 1502 aa23.61■■□□□ 1.37
CDK16-209ENST00000517479 SIGLEC1Q9BZZ2 1709 aa23.6■■□□□ 1.37
CDK16-209ENST00000517479 SCAPERQ9BY12 1400 aa23.59■■□□□ 1.37
CDK16-209ENST00000517479 ZMYM4Q5VZL5 1548 aa23.59■■□□□ 1.37
CDK16-209ENST00000517479 POGZQ7Z3K3 1410 aa23.57■■□□□ 1.36
CDK16-209ENST00000517479 EFCAB2Q5VUJ9 269 aa23.55■■□□□ 1.36
CDK16-209ENST00000517479 YEATS2Q9ULM3 1422 aa23.55■■□□□ 1.36
CDK16-209ENST00000517479 ZFYVE16Q7Z3T8 1539 aa23.54■■□□□ 1.36
CDK16-209ENST00000517479 BCORL1Q5H9F3 1711 aa23.53■■□□□ 1.36
CDK16-209ENST00000517479 ADAMTSL3P82987 1691 aa23.53■■□□□ 1.36
CDK16-209ENST00000517479 ITSN2Q9NZM3 1697 aa23.51■■□□□ 1.35
CDK16-209ENST00000517479 ABCC1P33527 1531 aa23.5■■□□□ 1.35
CDK16-209ENST00000517479 ARHGEF12Q9NZN5 1544 aa23.49■■□□□ 1.35
CDK16-209ENST00000517479 KDM5CP41229 1560 aa23.48■■□□□ 1.35
CDK16-209ENST00000517479 SAMD9LQ8IVG5 1584 aa23.47■■□□□ 1.35
CDK16-209ENST00000517479 MADDQ8WXG6 1647 aa23.47■■□□□ 1.35
CDK16-209ENST00000517479 GPATCH8Q9UKJ3 1502 aaKnown RBP23.46■■□□□ 1.35
CDK16-209ENST00000517479 EHBP1L1Q8N3D4 1523 aa23.45■■□□□ 1.34
CDK16-209ENST00000517479 MAGI2Q86UL8 1455 aa23.45■■□□□ 1.34
CDK16-209ENST00000517479 MTUS2Q5JR59 1369 aa23.45■■□□□ 1.34
CDK16-209ENST00000517479 ZNF518AQ6AHZ1 1483 aa23.44■■□□□ 1.34
CDK16-209ENST00000517479 ARID4BQ4LE39 1312 aaPredicted RBP23.43■■□□□ 1.34
CDK16-209ENST00000517479 AFAP1Q8N556 730 aa23.43■■□□□ 1.34
CDK16-209ENST00000517479 HECW2Q9P2P5 1572 aa23.43■■□□□ 1.34
CDK16-209ENST00000517479 TRAPPC8Q9Y2L5 1435 aa23.42■■□□□ 1.34
CDK16-209ENST00000517479 TIAM1Q13009 1591 aa23.42■■□□□ 1.34
CDK16-209ENST00000517479 VPS8Q8N3P4 1428 aa23.42■■□□□ 1.34
CDK16-209ENST00000517479 RIMS1Q86UR5 1692 aaKnown RBP23.41■■□□□ 1.34
CDK16-209ENST00000517479 ABCA6Q8N139 1617 aa23.41■■□□□ 1.34
CDK16-209ENST00000517479 DIP2CQ9Y2E4 1556 aa23.4■■□□□ 1.34
CDK16-209ENST00000517479 SYCP2Q9BX26 1530 aa23.39■■□□□ 1.34
CDK16-209ENST00000517479 ZNF777Q9ULD5 760 aaPredicted RBP23.38■■□□□ 1.33
CDK16-209ENST00000517479 PTPRMP28827 1452 aa23.37■■□□□ 1.33
CDK16-209ENST00000517479 KIDINS220Q9ULH0 1771 aa23.37■■□□□ 1.33
CDK16-209ENST00000517479 ATP10AO60312 1499 aa23.36■■□□□ 1.33
CDK16-209ENST00000517479 CCNB3Q8WWL7 1395 aa23.36■■□□□ 1.33
CDK16-209ENST00000517479 C9orf84Q5VXU9 1444 aa23.35■■□□□ 1.33
CDK16-209ENST00000517479 FER1L4A9Z1Z3 1794 aa23.35■■□□□ 1.33
CDK16-209ENST00000517479 SUPT6HQ7KZ85 1726 aaKnown RBP23.35■■□□□ 1.33
CDK16-209ENST00000517479 MLH3Q9UHC1 1453 aa23.33■■□□□ 1.33
CDK16-209ENST00000517479 CFDP1Q9UEE9 299 aaPredicted RBP23.31■■□□□ 1.32
CDK16-209ENST00000517479 NCOA2Q15596 1464 aa23.3■■□□□ 1.32
CDK16-209ENST00000517479 MLECQ14165 292 aa23.3■■□□□ 1.32
CDK16-209ENST00000517479 HNRNPMP52272 730 aaKnown RBP eCLIP23.29■■□□□ 1.329e-7■■■□□ 18.6
CDK16-209ENST00000517479 MYT1LQ9UL68 1186 aa23.29■■□□□ 1.32
CDK16-209ENST00000517479 ZNF644Q9H582 1327 aaPredicted RBP23.28■■□□□ 1.32
CDK16-209ENST00000517479 REREQ9P2R6 1566 aa23.27■■□□□ 1.32
CDK16-209ENST00000517479 LRRC9Q6ZRR7 1453 aa23.27■■□□□ 1.32
CDK16-209ENST00000517479 INO80Q9ULG1 1556 aaPredicted RBP23.26■■□□□ 1.31
CDK16-209ENST00000517479 KIAA1107Q9UPP5 1409 aa23.24■■□□□ 1.31
CDK16-209ENST00000517479 PLEKHH2Q8IVE3 1493 aa23.24■■□□□ 1.31
CDK16-209ENST00000517479 KANK4Q5T7N3 995 aaPredicted RBP23.23■■□□□ 1.31
CDK16-209ENST00000517479 ATP7AQ04656 1500 aa23.23■■□□□ 1.31
CDK16-209ENST00000517479 PLPPR3Q6T4P5 718 aa23.21■■□□□ 1.31
CDK16-209ENST00000517479 MAP3K1Q13233 1512 aa23.21■■□□□ 1.31
CDK16-209ENST00000517479 MBD5Q9P267 1494 aa23.2■■□□□ 1.3
CDK16-209ENST00000517479 CAMSAP2Q08AD1 1489 aa23.19■■□□□ 1.3
CDK16-209ENST00000517479 SPAG9O60271 1321 aaKnown RBP23.18■■□□□ 1.3
CDK16-209ENST00000517479 AGLP35573 1532 aa23.18■■□□□ 1.3
CDK16-209ENST00000517479 PLXNC1O60486 1568 aa23.14■■□□□ 1.3
CDK16-209ENST00000517479 ADGBQ8N7X0 1667 aa23.14■■□□□ 1.29
CDK16-209ENST00000517479 LMTK3Q96Q04 1460 aa23.13■■□□□ 1.29
CDK16-209ENST00000517479 C3P01024 1663 aa23.11■■□□□ 1.29
CDK16-209ENST00000517479 CCDC141Q6ZP82 1450 aa23.1■■□□□ 1.29
CDK16-209ENST00000517479 CEBPAP49715 358 aaPredicted RBP23.09■■□□□ 1.29
CDK16-209ENST00000517479 A2MP01023 1474 aa23.09■■□□□ 1.29
CDK16-209ENST00000517479 ARHGEF5Q12774 1597 aa23.08■■□□□ 1.29
CDK16-209ENST00000517479 MYOM3Q5VTT5 1437 aa23.06■■□□□ 1.28
CDK16-209ENST00000517479 PREX1Q8TCU6 1659 aa23.05■■□□□ 1.28
CDK16-209ENST00000517479 CLTCQ00610 1675 aaKnown RBP23.04■■□□□ 1.28
CDK16-209ENST00000517479 RTEL1-TNFRSF6BF6WH68 1400 aa23.03■■□□□ 1.28
CDK16-209ENST00000517479 MROH2AA6NES4 1674 aa23■■□□□ 1.27
CDK16-209ENST00000517479 HSPA2P54652 639 aa23■■□□□ 1.27
CDK16-209ENST00000517479 APLP2Q06481 763 aa23■■□□□ 1.27
CDK16-209ENST00000517479 MIA2Q96PC5 1412 aa22.99■■□□□ 1.27
CDK16-209ENST00000517479 PTPN23Q9H3S7 1636 aa22.98■■□□□ 1.27
CDK16-209ENST00000517479 SETD1BQ9UPS6 1966 aaKnown RBP22.97■■□□□ 1.27
CDK16-209ENST00000517479 MAST1Q9Y2H9 1570 aa22.97■■□□□ 1.27
CDK16-209ENST00000517479 CROCC2H7BZ55 1655 aa22.97■■□□□ 1.27
CDK16-209ENST00000517479 CNTLNQ9NXG0 1405 aa22.94■■□□□ 1.26
CDK16-209ENST00000517479 DHX29Q7Z478 1369 aaKnown RBP22.94■■□□□ 1.26
CDK16-209ENST00000517479 GGT6Q6P531 493 aa22.94■■□□□ 1.26
CDK16-209ENST00000517479 ESF1Q9H501 851 aaKnown RBP22.94■■□□□ 1.26
CDK16-209ENST00000517479 RSPH4AQ5TD94 716 aa22.93■■□□□ 1.26
CDK16-209ENST00000517479 FGD6Q6ZV73 1430 aa22.91■■□□□ 1.26
CDK16-209ENST00000517479 TSPY4P0CV99 314 aa22.89■■□□□ 1.25
CDK16-209ENST00000517479 TSPY10P0CW01 314 aa22.89■■□□□ 1.25
CDK16-209ENST00000517479 DNMT1P26358 1616 aaKnown RBP22.89■■□□□ 1.25
CDK16-209ENST00000517479 ZMYM3Q14202 1370 aa22.89■■□□□ 1.25
CDK16-209ENST00000517479 UHRF1BP1Q6BDS2 1440 aa22.88■■□□□ 1.25
CDK16-209ENST00000517479 TCOF1Q13428 1488 aaKnown RBP22.87■■□□□ 1.25
CDK16-209ENST00000517479 STRCQ7RTU9 1775 aa22.87■■□□□ 1.25
CDK16-209ENST00000517479 KIF3BO15066 747 aa22.87■■□□□ 1.25
CDK16-209ENST00000517479 ABCC5O15440 1437 aa22.86■■□□□ 1.25
CDK16-209ENST00000517479 RNF17Q9BXT8 1623 aaKnown RBP22.84■■□□□ 1.25
CDK16-209ENST00000517479 DAPK1P53355 1430 aa22.83■■□□□ 1.25
CDK16-209ENST00000517479 MYO3AQ8NEV4 1616 aa22.83■■□□□ 1.25
CDK16-209ENST00000517479 EIF2AK4Q9P2K8 1649 aaKnown RBP22.82■■□□□ 1.24
CDK16-209ENST00000517479 SHANK2Q9UPX8 1470 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms