RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 UBTFP17480 764 aaKnown RBP14.42□□□□□ -0.1
PABPC1-202ENST00000517403 PTPRMP28827 1452 aa14.42□□□□□ -0.1
PABPC1-202ENST00000517403 FMN1Q68DA7 1419 aa14.41□□□□□ -0.1
PABPC1-202ENST00000517403 POTEDQ86YR6 584 aa14.41□□□□□ -0.1
PABPC1-202ENST00000517403 PHLDB1Q86UU1 1377 aa14.41□□□□□ -0.1
PABPC1-202ENST00000517403 PLCH2O75038 1416 aa14.41□□□□□ -0.1
PABPC1-202ENST00000517403 POGZQ7Z3K3 1410 aa14.41□□□□□ -0.1
PABPC1-202ENST00000517403 ZFYVE16Q7Z3T8 1539 aa14.4□□□□□ -0.1
PABPC1-202ENST00000517403 PLEKHD1A6NEE1 506 aa14.39□□□□□ -0.11
PABPC1-202ENST00000517403 PREX2Q70Z35 1606 aa14.39□□□□□ -0.11
PABPC1-202ENST00000517403 TROQ12816 1431 aaPredicted RBP14.39□□□□□ -0.11
PABPC1-202ENST00000517403 ARHGEF12Q9NZN5 1544 aa14.38□□□□□ -0.11
PABPC1-202ENST00000517403 KDM5CP41229 1560 aa14.38□□□□□ -0.11
PABPC1-202ENST00000517403 CDC42BPAQ5VT25 1732 aa14.38□□□□□ -0.11
PABPC1-202ENST00000517403 CASKIN1Q8WXD9 1431 aa14.36□□□□□ -0.11
PABPC1-202ENST00000517403 SCAPERQ9BY12 1400 aa14.36□□□□□ -0.11
PABPC1-202ENST00000517403 ABCA6Q8N139 1617 aa14.36□□□□□ -0.11
PABPC1-202ENST00000517403 ITSN2Q9NZM3 1697 aa14.35□□□□□ -0.11
PABPC1-202ENST00000517403 DIP2CQ9Y2E4 1556 aa14.34□□□□□ -0.11
PABPC1-202ENST00000517403 LMTK3Q96Q04 1460 aa14.34□□□□□ -0.11
PABPC1-202ENST00000517403 ABCC1P33527 1531 aa14.34□□□□□ -0.11
PABPC1-202ENST00000517403 FER1L4A9Z1Z3 1794 aa14.33□□□□□ -0.12
PABPC1-202ENST00000517403 ARHGAP5Q13017 1502 aa14.33□□□□□ -0.12
PABPC1-202ENST00000517403 FYCO1Q9BQS8 1478 aa14.32□□□□□ -0.12
PABPC1-202ENST00000517403 ATP1B4Q9UN42 357 aaPredicted RBP14.32□□□□□ -0.12
PABPC1-202ENST00000517403 SAMD9LQ8IVG5 1584 aa14.31□□□□□ -0.12
PABPC1-202ENST00000517403 CLIP1P30622 1438 aa14.31□□□□□ -0.12
PABPC1-202ENST00000517403 TRAPPC8Q9Y2L5 1435 aa14.31□□□□□ -0.12
PABPC1-202ENST00000517403 CCDC18Q5T9S5 1454 aa14.29□□□□□ -0.12
PABPC1-202ENST00000517403 KIDINS220Q9ULH0 1771 aa14.29□□□□□ -0.12
PABPC1-202ENST00000517403 MAGI2Q86UL8 1455 aa14.28□□□□□ -0.12
PABPC1-202ENST00000517403 SYCP2Q9BX26 1530 aa14.25□□□□□ -0.13
PABPC1-202ENST00000517403 ZNF518AQ6AHZ1 1483 aa14.25□□□□□ -0.13
PABPC1-202ENST00000517403 C9orf84Q5VXU9 1444 aa14.25□□□□□ -0.13
PABPC1-202ENST00000517403 ILDR1Q86SU0 546 aaPredicted RBP14.25□□□□□ -0.13
PABPC1-202ENST00000517403 AFAP1Q8N556 730 aa14.25□□□□□ -0.13
PABPC1-202ENST00000517403 ATP10AO60312 1499 aa14.25□□□□□ -0.13
PABPC1-202ENST00000517403 ARID4BQ4LE39 1312 aaPredicted RBP14.24□□□□□ -0.13
PABPC1-202ENST00000517403 TIAM1Q13009 1591 aa14.24□□□□□ -0.13
PABPC1-202ENST00000517403 REREQ9P2R6 1566 aa14.24□□□□□ -0.13
PABPC1-202ENST00000517403 SLC4A1APQ9BWU0 796 aaKnown RBP14.23□□□□□ -0.13
PABPC1-202ENST00000517403 GPATCH8Q9UKJ3 1502 aaKnown RBP14.23□□□□□ -0.13
PABPC1-202ENST00000517403 MSH5O43196 834 aa14.22□□□□□ -0.13
PABPC1-202ENST00000517403 INO80Q9ULG1 1556 aaPredicted RBP14.22□□□□□ -0.13
PABPC1-202ENST00000517403 MLH3Q9UHC1 1453 aa14.21□□□□□ -0.13
PABPC1-202ENST00000517403 MLECQ14165 292 aa14.21□□□□□ -0.13
PABPC1-202ENST00000517403 CEP162Q5TB80 1403 aa14.21□□□□□ -0.13
PABPC1-202ENST00000517403 C3P01024 1663 aa14.2□□□□□ -0.14
PABPC1-202ENST00000517403 EFCAB2Q5VUJ9 269 aa14.2□□□□□ -0.14
PABPC1-202ENST00000517403 HSPA2P54652 639 aa14.19□□□□□ -0.14
PABPC1-202ENST00000517403 PLXNC1O60486 1568 aa14.17□□□□□ -0.14
PABPC1-202ENST00000517403 PREX1Q8TCU6 1659 aa14.17□□□□□ -0.14
PABPC1-202ENST00000517403 AGLP35573 1532 aa14.16□□□□□ -0.14
PABPC1-202ENST00000517403 CEBPAP49715 358 aaPredicted RBP14.16□□□□□ -0.14
PABPC1-202ENST00000517403 STRCQ7RTU9 1775 aa14.16□□□□□ -0.14
PABPC1-202ENST00000517403 CDK11AQ9UQ88 783 aaPredicted RBP14.15□□□□□ -0.14
PABPC1-202ENST00000517403 EHBP1L1Q8N3D4 1523 aa14.15□□□□□ -0.14
PABPC1-202ENST00000517403 SUPT6HQ7KZ85 1726 aaKnown RBP14.14□□□□□ -0.15
PABPC1-202ENST00000517403 ATP7AQ04656 1500 aa14.14□□□□□ -0.15
PABPC1-202ENST00000517403 ADGBQ8N7X0 1667 aa14.13□□□□□ -0.15
PABPC1-202ENST00000517403 ZNF644Q9H582 1327 aaPredicted RBP14.13□□□□□ -0.15
PABPC1-202ENST00000517403 MBD5Q9P267 1494 aa14.12□□□□□ -0.15
PABPC1-202ENST00000517403 PPP4R3CPQ6ZMV5 832 aa14.1□□□□□ -0.15
PABPC1-202ENST00000517403 LOC105371045A0A1W2PR82 267 aa14.09□□□□□ -0.15
PABPC1-202ENST00000517403 HNRNPMP52272 730 aaKnown RBP eCLIP14.09□□□□□ -0.15
PABPC1-202ENST00000517403 CLTCQ00610 1675 aaKnown RBP14.08□□□□□ -0.16
PABPC1-202ENST00000517403 ZNF777Q9ULD5 760 aaPredicted RBP14.08□□□□□ -0.16
PABPC1-202ENST00000517403 MROH2AA6NES4 1674 aa14.07□□□□□ -0.16
PABPC1-202ENST00000517403 NCOA2Q15596 1464 aa14.07□□□□□ -0.16
PABPC1-202ENST00000517403 MTUS2Q5JR59 1369 aa14.07□□□□□ -0.16
PABPC1-202ENST00000517403 KIAA1107Q9UPP5 1409 aa14.07□□□□□ -0.16
PABPC1-202ENST00000517403 CCNB3Q8WWL7 1395 aa14.06□□□□□ -0.16
PABPC1-202ENST00000517403 CAMSAP2Q08AD1 1489 aa14.06□□□□□ -0.16
PABPC1-202ENST00000517403 A2MP01023 1474 aa14.04□□□□□ -0.16
PABPC1-202ENST00000517403 MYO3AQ8NEV4 1616 aa14.04□□□□□ -0.16
PABPC1-202ENST00000517403 VPS8Q8N3P4 1428 aa14.03□□□□□ -0.16
PABPC1-202ENST00000517403 ZNF142P52746 1687 aaPredicted RBP14.01□□□□□ -0.17
PABPC1-202ENST00000517403 PLEKHH2Q8IVE3 1493 aa14.01□□□□□ -0.17
PABPC1-202ENST00000517403 CFDP1Q9UEE9 299 aaPredicted RBP14.01□□□□□ -0.17
PABPC1-202ENST00000517403 LRRC9Q6ZRR7 1453 aa14□□□□□ -0.17
PABPC1-202ENST00000517403 SPAG9O60271 1321 aaKnown RBP14□□□□□ -0.17
PABPC1-202ENST00000517403 UHRF1BP1Q6BDS2 1440 aa13.99□□□□□ -0.17
PABPC1-202ENST00000517403 MYT1LQ9UL68 1186 aa13.99□□□□□ -0.17
PABPC1-202ENST00000517403 KANK4Q5T7N3 995 aaPredicted RBP13.98□□□□□ -0.17
PABPC1-202ENST00000517403 PTPRKQ15262 1439 aa13.98□□□□□ -0.17
PABPC1-202ENST00000517403 MROH1Q8NDA8 1641 aa13.97□□□□□ -0.17
PABPC1-202ENST00000517403 ARHGEF5Q12774 1597 aa13.97□□□□□ -0.17
PABPC1-202ENST00000517403 CCDC141Q6ZP82 1450 aa13.97□□□□□ -0.17
PABPC1-202ENST00000517403 PIAS4Q8N2W9 510 aaPredicted RBP13.96□□□□□ -0.17
PABPC1-202ENST00000517403 LTBP4Q8N2S1 1624 aa13.96□□□□□ -0.17
PABPC1-202ENST00000517403 NCOA1Q15788 1441 aa13.96□□□□□ -0.18
PABPC1-202ENST00000517403 SETD1BQ9UPS6 1966 aaKnown RBP13.95□□□□□ -0.18
PABPC1-202ENST00000517403 CAMSAP1Q5T5Y3 1602 aa13.95□□□□□ -0.18
PABPC1-202ENST00000517403 FBXO41Q8TF61 875 aa13.95□□□□□ -0.18
PABPC1-202ENST00000517403 CNTLNQ9NXG0 1405 aa13.95□□□□□ -0.18
PABPC1-202ENST00000517403 CEP170BQ9Y4F5 1589 aaPredicted RBP13.95□□□□□ -0.18
PABPC1-202ENST00000517403 ZMYM3Q14202 1370 aa13.94□□□□□ -0.18
PABPC1-202ENST00000517403 MAST1Q9Y2H9 1570 aa13.93□□□□□ -0.18
PABPC1-202ENST00000517403 RTEL1-TNFRSF6BF6WH68 1400 aa13.93□□□□□ -0.18
PABPC1-202ENST00000517403 NPATQ14207 1427 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms