RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 AEBP1Q8IUX7 1158 aa4.53□□□□□ -1.68
SCARNA11.3-201ENST00000517276 GPR37O15354 613 aa4.52□□□□□ -1.69
SCARNA11.3-201ENST00000517276 PDE4AP27815 886 aa4.52□□□□□ -1.69
SCARNA11.3-201ENST00000517276 NLRP6P59044 892 aa4.52□□□□□ -1.69
SCARNA11.3-201ENST00000517276 DDX27Q96GQ7 796 aaKnown RBP4.52□□□□□ -1.69
SCARNA11.3-201ENST00000517276 ZNF777Q9ULD5 760 aaPredicted RBP4.52□□□□□ -1.69
SCARNA11.3-201ENST00000517276 ARIH1Q9Y4X5 557 aaPredicted RBP4.52□□□□□ -1.69
SCARNA11.3-201ENST00000517276 A6NJR5 290 aa4.51□□□□□ -1.69
SCARNA11.3-201ENST00000517276 CAMK2BQ13554 666 aa4.51□□□□□ -1.69
SCARNA11.3-201ENST00000517276 PARP9Q8IXQ6 854 aa4.51□□□□□ -1.69
SCARNA11.3-201ENST00000517276 ZNF428Q96B54 188 aa4.51□□□□□ -1.69
SCARNA11.3-201ENST00000517276 DDRGK1Q96HY6 314 aa4.51□□□□□ -1.69
SCARNA11.3-201ENST00000517276 CRISPLD2Q9H0B8 497 aa4.51□□□□□ -1.69
SCARNA11.3-201ENST00000517276 CABP2Q9NPB3 220 aa4.51□□□□□ -1.69
SCARNA11.3-201ENST00000517276 IGSF3O75054 1194 aa4.5□□□□□ -1.69
SCARNA11.3-201ENST00000517276 FOXD4L5Q5VV16 416 aaPredicted RBP4.5□□□□□ -1.69
SCARNA11.3-201ENST00000517276 FOXD4L4Q8WXT5 416 aaPredicted RBP4.5□□□□□ -1.69
SCARNA11.3-201ENST00000517276 CCDC102AQ96A19 550 aa4.5□□□□□ -1.69
SCARNA11.3-201ENST00000517276 TRAIPQ9BWF2 469 aa4.5□□□□□ -1.69
SCARNA11.3-201ENST00000517276 MTMR7Q9Y216 660 aa4.5□□□□□ -1.69
SCARNA11.3-201ENST00000517276 RGS22Q8NE09 1264 aa4.49□□□□□ -1.69
SCARNA11.3-201ENST00000517276 POM121Q96HA1 1249 aa4.49□□□□□ -1.69
SCARNA11.3-201ENST00000517276 MS4A4AQ96JQ5 239 aa4.49□□□□□ -1.69
SCARNA11.3-201ENST00000517276 DPYSL4O14531 572 aa4.48□□□□□ -1.69
SCARNA11.3-201ENST00000517276 MCM6Q14566 821 aa4.48□□□□□ -1.69
SCARNA11.3-201ENST00000517276 SOX12O15370 315 aa4.47□□□□□ -1.69
SCARNA11.3-201ENST00000517276 PROSER2Q86WR7 435 aaPredicted RBP4.47□□□□□ -1.69
SCARNA11.3-201ENST00000517276 ZNF579Q8NAF0 562 aaKnown RBP4.47□□□□□ -1.69
SCARNA11.3-201ENST00000517276 GZF1Q9H116 711 aaPredicted RBP4.47□□□□□ -1.69
SCARNA11.3-201ENST00000517276 RBM25P49756 843 aaKnown RBP4.46□□□□□ -1.7
SCARNA11.3-201ENST00000517276 MFAP1P55081 439 aaKnown RBP4.46□□□□□ -1.7
SCARNA11.3-201ENST00000517276 IRF5Q13568 498 aa4.46□□□□□ -1.7
SCARNA11.3-201ENST00000517276 AMHR2Q16671 573 aa4.46□□□□□ -1.7
SCARNA11.3-201ENST00000517276 TMCO4Q5TGY1 634 aa4.46□□□□□ -1.7
SCARNA11.3-201ENST00000517276 IFNL1Q8IU54 200 aa4.46□□□□□ -1.7
SCARNA11.3-201ENST00000517276 RETREG2Q8NC44 543 aa4.46□□□□□ -1.7
SCARNA11.3-201ENST00000517276 CCDC97Q96F63 343 aaPredicted RBP4.46□□□□□ -1.7
SCARNA11.3-201ENST00000517276 MINK1Q8N4C8 1332 aaPredicted RBP4.46□□□□□ -1.7
SCARNA11.3-201ENST00000517276 IRF6O14896 467 aa4.45□□□□□ -1.7
SCARNA11.3-201ENST00000517276 MS4A1P11836 297 aa4.45□□□□□ -1.7
SCARNA11.3-201ENST00000517276 FECHP22830 423 aa4.45□□□□□ -1.7
SCARNA11.3-201ENST00000517276 MAP2K5Q13163 448 aa4.45□□□□□ -1.7
SCARNA11.3-201ENST00000517276 CHADLQ6NUI6 762 aa4.45□□□□□ -1.7
SCARNA11.3-201ENST00000517276 PCMTD1Q96MG8 357 aaPredicted RBP4.45□□□□□ -1.7
SCARNA11.3-201ENST00000517276 EMILIN3Q9NT22 766 aa4.45□□□□□ -1.7
SCARNA11.3-201ENST00000517276 NUTM2FA1L443 756 aa4.44□□□□□ -1.7
SCARNA11.3-201ENST00000517276 TTLL12Q14166 644 aaPredicted RBP4.44□□□□□ -1.7
SCARNA11.3-201ENST00000517276 PPP1R15BQ5SWA1 713 aa4.44□□□□□ -1.7
SCARNA11.3-201ENST00000517276 FNBP4Q8N3X1 1017 aaPredicted RBP4.44□□□□□ -1.7
SCARNA11.3-201ENST00000517276 CCDC61Q9Y6R9 512 aa4.44□□□□□ -1.7
SCARNA11.3-201ENST00000517276 PDIA6Q15084 440 aa4.43□□□□□ -1.7
SCARNA11.3-201ENST00000517276 REM2Q8IYK8 340 aaPredicted RBP4.43□□□□□ -1.7
SCARNA11.3-201ENST00000517276 REPIN1Q9BWE0 567 aaKnown RBP4.43□□□□□ -1.7
SCARNA11.3-201ENST00000517276 GOPCQ9HD26 462 aa4.43□□□□□ -1.7
SCARNA11.3-201ENST00000517276 SERPINA10Q9UK55 444 aa4.43□□□□□ -1.7
SCARNA11.3-201ENST00000517276 GRXCR2A6NFK2 248 aa4.42□□□□□ -1.7
SCARNA11.3-201ENST00000517276 GIGYF2Q6Y7W6 1299 aaKnown RBP4.42□□□□□ -1.7
SCARNA11.3-201ENST00000517276 AKT1S1Q96B36 256 aa4.42□□□□□ -1.7
SCARNA11.3-201ENST00000517276 GNPATO15228 680 aa4.41□□□□□ -1.7
SCARNA11.3-201ENST00000517276 MAP3K13O43283 966 aa4.41□□□□□ -1.7
SCARNA11.3-201ENST00000517276 OXER1Q8TDS5 423 aa4.41□□□□□ -1.7
SCARNA11.3-201ENST00000517276 PLSCR2Q9NRY7 297 aa4.41□□□□□ -1.7
SCARNA11.3-201ENST00000517276 SPDYE16A6NNV3 312 aaPredicted RBP4.4□□□□□ -1.71
SCARNA11.3-201ENST00000517276 SH3D19Q5HYK7 790 aa4.4□□□□□ -1.71
SCARNA11.3-201ENST00000517276 PROCA1Q8NCQ7 364 aaPredicted RBP4.4□□□□□ -1.71
SCARNA11.3-201ENST00000517276 SHROOM4Q9ULL8 1493 aa4.39□□□□□ -1.71
SCARNA11.3-201ENST00000517276 PITPNM1O00562 1244 aa4.39□□□□□ -1.71
SCARNA11.3-201ENST00000517276 FBXW7Q969H0 707 aa4.39□□□□□ -1.71
SCARNA11.3-201ENST00000517276 ATP1B4Q9UN42 357 aaPredicted RBP4.39□□□□□ -1.71
SCARNA11.3-201ENST00000517276 COG6Q9Y2V7 657 aa4.39□□□□□ -1.71
SCARNA11.3-201ENST00000517276 DSG2Q14126 1118 aa4.38□□□□□ -1.71
SCARNA11.3-201ENST00000517276 GPHNQ9NQX3 736 aaPredicted RBP4.38□□□□□ -1.71
SCARNA11.3-201ENST00000517276 FARP1Q9Y4F1 1045 aaPredicted RBP4.38□□□□□ -1.71
SCARNA11.3-201ENST00000517276 OSBPP22059 807 aa4.37□□□□□ -1.71
SCARNA11.3-201ENST00000517276 HIC1Q14526 733 aa4.37□□□□□ -1.71
SCARNA11.3-201ENST00000517276 SNRKQ9NRH2 765 aa4.37□□□□□ -1.71
SCARNA11.3-201ENST00000517276 POLR3EQ9NVU0 708 aa4.37□□□□□ -1.71
SCARNA11.3-201ENST00000517276 ZNF330Q9Y3S2 320 aaPredicted RBP4.37□□□□□ -1.71
SCARNA11.3-201ENST00000517276 FCHSD2O94868 740 aa4.36□□□□□ -1.71
SCARNA11.3-201ENST00000517276 PRIM1P49642 420 aaKnown RBP4.36□□□□□ -1.71
SCARNA11.3-201ENST00000517276 KIF12Q96FN5 646 aa4.36□□□□□ -1.71
SCARNA11.3-201ENST00000517276 CARNS1A5YM72 827 aa4.35□□□□□ -1.71
SCARNA11.3-201ENST00000517276 E9PSI1 815 aa4.35□□□□□ -1.71
SCARNA11.3-201ENST00000517276 SKIV2LQ15477 1246 aaKnown RBP4.35□□□□□ -1.71
SCARNA11.3-201ENST00000517276 FBXO31Q5XUX0 539 aaPredicted RBP4.35□□□□□ -1.71
SCARNA11.3-201ENST00000517276 SPDYE5A6NIY4 337 aa4.34□□□□□ -1.71
SCARNA11.3-201ENST00000517276 POM121CA8CG34 1229 aa4.34□□□□□ -1.71
SCARNA11.3-201ENST00000517276 MDM2Q00987 491 aaPredicted RBP4.34□□□□□ -1.71
SCARNA11.3-201ENST00000517276 DDX12PQ92771 950 aa4.34□□□□□ -1.71
SCARNA11.3-201ENST00000517276 TMUB1Q9BVT8 246 aa4.34□□□□□ -1.71
SCARNA11.3-201ENST00000517276 SSTR3P32745 418 aaPredicted RBP4.33□□□□□ -1.72
SCARNA11.3-201ENST00000517276 GOLGA2Q08379 1002 aa4.33□□□□□ -1.72
SCARNA11.3-201ENST00000517276 PHOX2BQ99453 314 aa4.33□□□□□ -1.72
SCARNA11.3-201ENST00000517276 RBM42Q9BTD8 480 aaKnown RBP4.33□□□□□ -1.72
SCARNA11.3-201ENST00000517276 BEGAINQ9BUH8 593 aa4.33□□□□□ -1.72
SCARNA11.3-201ENST00000517276 MAP3K9P80192 1104 aa4.32□□□□□ -1.72
SCARNA11.3-201ENST00000517276 PTGDRQ13258 359 aa4.32□□□□□ -1.72
SCARNA11.3-201ENST00000517276 PLPP6Q8IY26 295 aa4.32□□□□□ -1.72
SCARNA11.3-201ENST00000517276 NLRP7Q8WX94 980 aa4.32□□□□□ -1.72
SCARNA11.3-201ENST00000517276 UPF1Q92900 1129 aaKnown RBP eCLIP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms