RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 DDRGK1Q96HY6 314 aa6.27□□□□□ -1.41
RNU4-60P-201ENST00000517239 SERPINA10Q9UK55 444 aa6.26□□□□□ -1.41
RNU4-60P-201ENST00000517239 ONECUT3O60422 494 aaPredicted RBP6.25□□□□□ -1.41
RNU4-60P-201ENST00000517239 PPP1R37O75864 691 aa6.25□□□□□ -1.41
RNU4-60P-201ENST00000517239 FBXW7Q969H0 707 aa6.24□□□□□ -1.41
RNU4-60P-201ENST00000517239 LARP6Q9BRS8 491 aaKnown RBP6.24□□□□□ -1.41
RNU4-60P-201ENST00000517239 MFRPQ9BY79 579 aa6.24□□□□□ -1.41
RNU4-60P-201ENST00000517239 MLLT3P42568 568 aaPredicted RBP6.23□□□□□ -1.41
RNU4-60P-201ENST00000517239 RASEFQ8IZ41 740 aa6.23□□□□□ -1.41
RNU4-60P-201ENST00000517239 RETREG2Q8NC44 543 aa6.23□□□□□ -1.41
RNU4-60P-201ENST00000517239 IRF5Q13568 498 aa6.22□□□□□ -1.41
RNU4-60P-201ENST00000517239 PUS7Q96PZ0 661 aaKnown RBP6.22□□□□□ -1.41
RNU4-60P-201ENST00000517239 PROSER2Q86WR7 435 aaPredicted RBP6.21□□□□□ -1.42
RNU4-60P-201ENST00000517239 USP35Q9P2H5 1018 aa6.21□□□□□ -1.42
RNU4-60P-201ENST00000517239 PCMTD1Q96MG8 357 aaPredicted RBP6.2□□□□□ -1.42
RNU4-60P-201ENST00000517239 PDE4AP27815 886 aa6.19□□□□□ -1.42
RNU4-60P-201ENST00000517239 ARIH1Q9Y4X5 557 aaPredicted RBP6.19□□□□□ -1.42
RNU4-60P-201ENST00000517239 NCKAP5LQ9HCH0 1330 aa6.19□□□□□ -1.42
RNU4-60P-201ENST00000517239 GOPCQ9HD26 462 aa6.18□□□□□ -1.42
RNU4-60P-201ENST00000517239 MCM6Q14566 821 aa6.17□□□□□ -1.42
RNU4-60P-201ENST00000517239 ACIN1Q9UKV3 1341 aaKnown RBP6.17□□□□□ -1.42
RNU4-60P-201ENST00000517239 PDAP1Q13442 181 aaKnown RBP6.16□□□□□ -1.42
RNU4-60P-201ENST00000517239 PARP9Q8IXQ6 854 aa6.16□□□□□ -1.42
RNU4-60P-201ENST00000517239 FNBP4Q8N3X1 1017 aaPredicted RBP6.16□□□□□ -1.42
RNU4-60P-201ENST00000517239 POM121Q96HA1 1249 aa6.16□□□□□ -1.42
RNU4-60P-201ENST00000517239 MINK1Q8N4C8 1332 aaPredicted RBP6.16□□□□□ -1.42
RNU4-60P-201ENST00000517239 ZNF467Q7Z7K2 595 aaPredicted RBP6.15□□□□□ -1.42
RNU4-60P-201ENST00000517239 DDX27Q96GQ7 796 aaKnown RBP6.15□□□□□ -1.42
RNU4-60P-201ENST00000517239 MNX1P50219 401 aaPredicted RBP6.14□□□□□ -1.43
RNU4-60P-201ENST00000517239 NLRP6P59044 892 aa6.14□□□□□ -1.43
RNU4-60P-201ENST00000517239 MFSD10Q14728 455 aa6.14□□□□□ -1.43
RNU4-60P-201ENST00000517239 CCDC102AQ96A19 550 aa6.14□□□□□ -1.43
RNU4-60P-201ENST00000517239 CREBZFQ9NS37 354 aa6.14□□□□□ -1.43
RNU4-60P-201ENST00000517239 MYT1LQ9UL68 1186 aa6.13□□□□□ -1.43
RNU4-60P-201ENST00000517239 PCDHB8Q9UN66 801 aa6.13□□□□□ -1.43
RNU4-60P-201ENST00000517239 PCDHB13Q9Y5F0 798 aa6.13□□□□□ -1.43
RNU4-60P-201ENST00000517239 IRF6O14896 467 aa6.12□□□□□ -1.43
RNU4-60P-201ENST00000517239 PDE4CQ08493 712 aa6.12□□□□□ -1.43
RNU4-60P-201ENST00000517239 AMHR2Q16671 573 aa6.12□□□□□ -1.43
RNU4-60P-201ENST00000517239 PLSCR2Q9NRY7 297 aa6.12□□□□□ -1.43
RNU4-60P-201ENST00000517239 ATP1B4Q9UN42 357 aaPredicted RBP6.12□□□□□ -1.43
RNU4-60P-201ENST00000517239 PATL2C9JE40 543 aaKnown RBP6.11□□□□□ -1.43
RNU4-60P-201ENST00000517239 PSEN1P49768 467 aa6.11□□□□□ -1.43
RNU4-60P-201ENST00000517239 CAMK2BQ13554 666 aa6.11□□□□□ -1.43
RNU4-60P-201ENST00000517239 TTLL12Q14166 644 aaPredicted RBP6.11□□□□□ -1.43
RNU4-60P-201ENST00000517239 FBXO22Q8NEZ5 403 aa6.11□□□□□ -1.43
RNU4-60P-201ENST00000517239 CHMP4AQ9BY43 222 aa6.11□□□□□ -1.43
RNU4-60P-201ENST00000517239 ZNF330Q9Y3S2 320 aaPredicted RBP6.11□□□□□ -1.43
RNU4-60P-201ENST00000517239 PPP1R15AO75807 674 aaPredicted RBP6.1□□□□□ -1.43
RNU4-60P-201ENST00000517239 MAP2K5Q13163 448 aa6.1□□□□□ -1.43
RNU4-60P-201ENST00000517239 EFCAB3Q8N7B9 438 aa6.1□□□□□ -1.43
RNU4-60P-201ENST00000517239 PHF8Q9UPP1 1060 aa6.1□□□□□ -1.43
RNU4-60P-201ENST00000517239 GPR37O15354 613 aa6.09□□□□□ -1.43
RNU4-60P-201ENST00000517239 RSPH4AQ5TD94 716 aa6.09□□□□□ -1.43
RNU4-60P-201ENST00000517239 CRISPLD2Q9H0B8 497 aa6.09□□□□□ -1.43
RNU4-60P-201ENST00000517239 NUTM2FA1L443 756 aa6.08□□□□□ -1.44
RNU4-60P-201ENST00000517239 SOX12O15370 315 aa6.08□□□□□ -1.44
RNU4-60P-201ENST00000517239 PRR29P0C7W0 189 aa6.07□□□□□ -1.44
RNU4-60P-201ENST00000517239 AMOTL2Q9Y2J4 779 aa6.07□□□□□ -1.44
RNU4-60P-201ENST00000517239 COG6Q9Y2V7 657 aa6.07□□□□□ -1.44
RNU4-60P-201ENST00000517239 MS4A1P11836 297 aa6.06□□□□□ -1.44
RNU4-60P-201ENST00000517239 DSG3P32926 999 aa6.06□□□□□ -1.44
RNU4-60P-201ENST00000517239 KCNA1Q09470 495 aa6.06□□□□□ -1.44
RNU4-60P-201ENST00000517239 CCDC27Q2M243 656 aa6.06□□□□□ -1.44
RNU4-60P-201ENST00000517239 GIGYF2Q6Y7W6 1299 aaKnown RBP6.06□□□□□ -1.44
RNU4-60P-201ENST00000517239 FAM177A1Q8N128 213 aaPredicted RBP6.06□□□□□ -1.44
RNU4-60P-201ENST00000517239 RNF39Q9H2S5 420 aa6.06□□□□□ -1.44
RNU4-60P-201ENST00000517239 SPDYE16A6NNV3 312 aaPredicted RBP6.05□□□□□ -1.44
RNU4-60P-201ENST00000517239 DPYSL4O14531 572 aa6.05□□□□□ -1.44
RNU4-60P-201ENST00000517239 BRD1O95696 1058 aa6.05□□□□□ -1.44
RNU4-60P-201ENST00000517239 SH3D19Q5HYK7 790 aa6.05□□□□□ -1.44
RNU4-60P-201ENST00000517239 CABP2Q9NPB3 220 aa6.05□□□□□ -1.44
RNU4-60P-201ENST00000517239 CALR3Q96L12 384 aaKnown RBP6.04□□□□□ -1.44
RNU4-60P-201ENST00000517239 TSPYL2Q9H2G4 693 aaPredicted RBP6.04□□□□□ -1.44
RNU4-60P-201ENST00000517239 CLEC11AQ9Y240 323 aa6.04□□□□□ -1.44
RNU4-60P-201ENST00000517239 FECHP22830 423 aa6.03□□□□□ -1.44
RNU4-60P-201ENST00000517239 SKIV2LQ15477 1246 aaKnown RBP6.03□□□□□ -1.44
RNU4-60P-201ENST00000517239 PROCA1Q8NCQ7 364 aaPredicted RBP6.03□□□□□ -1.44
RNU4-60P-201ENST00000517239 GNPATO15228 680 aa6.02□□□□□ -1.45
RNU4-60P-201ENST00000517239 C1QBPQ07021 282 aaKnown RBP6.02□□□□□ -1.45
RNU4-60P-201ENST00000517239 SPDYE1Q8NFV5 336 aaPredicted RBP6.02□□□□□ -1.45
RNU4-60P-201ENST00000517239 GRXCR2A6NFK2 248 aa6.01□□□□□ -1.45
RNU4-60P-201ENST00000517239 SPDYE5A6NIY4 337 aa6.01□□□□□ -1.45
RNU4-60P-201ENST00000517239 OXER1Q8TDS5 423 aa6.01□□□□□ -1.45
RNU4-60P-201ENST00000517239 REPIN1Q9BWE0 567 aaKnown RBP6.01□□□□□ -1.45
RNU4-60P-201ENST00000517239 SNRKQ9NRH2 765 aa6.01□□□□□ -1.45
RNU4-60P-201ENST00000517239 POLR3EQ9NVU0 708 aa6.01□□□□□ -1.45
RNU4-60P-201ENST00000517239 UNCXA6NJT0 531 aa6□□□□□ -1.45
RNU4-60P-201ENST00000517239 CSB-PGBD3P0DP91 1061 aa6□□□□□ -1.45
RNU4-60P-201ENST00000517239 PPP1R15BQ5SWA1 713 aa6□□□□□ -1.45
RNU4-60P-201ENST00000517239 ZNF579Q8NAF0 562 aaKnown RBP6□□□□□ -1.45
RNU4-60P-201ENST00000517239 PDIA6Q15084 440 aa5.99□□□□□ -1.45
RNU4-60P-201ENST00000517239 POLR3GLQ9BT43 218 aa5.99□□□□□ -1.45
RNU4-60P-201ENST00000517239 EMILIN3Q9NT22 766 aa5.99□□□□□ -1.45
RNU4-60P-201ENST00000517239 IVNS1ABPQ9Y6Y0 642 aa5.99□□□□□ -1.45
RNU4-60P-201ENST00000517239 CARNS1A5YM72 827 aa5.98□□□□□ -1.45
RNU4-60P-201ENST00000517239 PPM1GO15355 546 aaPredicted RBP5.98□□□□□ -1.45
RNU4-60P-201ENST00000517239 FCHSD2O94868 740 aa5.98□□□□□ -1.45
RNU4-60P-201ENST00000517239 RFX1P22670 979 aa5.98□□□□□ -1.45
RNU4-60P-201ENST00000517239 HIC1Q14526 733 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms