RNA–Protein interactions for RNA: ENST00000517211.2

RN7SKP40-201, Transcript of RNA, 7SK small nuclear pseudogene 40, humanhuman

BASIC

Gene RN7SKP40, Length 242 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP40-201ENST00000517211 NUDT7P0C024 238 aa9.35□□□□□ -0.91
RN7SKP40-201ENST00000517211 MS4A4AQ96JQ5 239 aa9.34□□□□□ -0.91
RN7SKP40-201ENST00000517211 IRX2Q9BZI1 471 aaPredicted RBP9.33□□□□□ -0.92
RN7SKP40-201ENST00000517211 LHX6Q9UPM6 363 aa9.33□□□□□ -0.92
RN7SKP40-201ENST00000517211 FKBP8Q14318 412 aa9.31□□□□□ -0.92
RN7SKP40-201ENST00000517211 ADGRD1Q6QNK2 874 aa9.31□□□□□ -0.92
RN7SKP40-201ENST00000517211 PBX2P40425 430 aa9.28□□□□□ -0.92
RN7SKP40-201ENST00000517211 KCTD12Q96CX2 325 aaKnown RBP9.28□□□□□ -0.92
RN7SKP40-201ENST00000517211 DMRTA1Q5VZB9 504 aa9.26□□□□□ -0.93
RN7SKP40-201ENST00000517211 HRO43593 1189 aa9.24□□□□□ -0.93
RN7SKP40-201ENST00000517211 CIZ1Q9ULV3 898 aaPredicted RBP9.24□□□□□ -0.93
RN7SKP40-201ENST00000517211 PHF8Q9UPP1 1060 aa9.24□□□□□ -0.93
RN7SKP40-201ENST00000517211 PSEN2P49810 448 aa9.22□□□□□ -0.93
RN7SKP40-201ENST00000517211 VASPP50552 380 aaPredicted RBP9.2□□□□□ -0.94
RN7SKP40-201ENST00000517211 PTPN5P54829 565 aa9.2□□□□□ -0.94
RN7SKP40-201ENST00000517211 ARHGAP33O14559 1287 aa9.19□□□□□ -0.94
RN7SKP40-201ENST00000517211 PCDHGA4Q9Y5G9 962 aa9.17□□□□□ -0.94
RN7SKP40-201ENST00000517211 C2orf72A6NCS6 295 aa9.15□□□□□ -0.94
RN7SKP40-201ENST00000517211 LCE2BO14633 110 aa9.14□□□□□ -0.95
RN7SKP40-201ENST00000517211 Q6ZNB5 142 aa9.14□□□□□ -0.95
RN7SKP40-201ENST00000517211 A0A0G2JS52 829 aa9.13□□□□□ -0.95
RN7SKP40-201ENST00000517211 KIF3CO14782 793 aa9.13□□□□□ -0.95
RN7SKP40-201ENST00000517211 FBXO3Q9UK99 471 aa9.12□□□□□ -0.95
RN7SKP40-201ENST00000517211 SOX12O15370 315 aa9.11□□□□□ -0.95
RN7SKP40-201ENST00000517211 RGS20O76081 388 aa9.11□□□□□ -0.95
RN7SKP40-201ENST00000517211 TK2O00142 265 aa9.1□□□□□ -0.95
RN7SKP40-201ENST00000517211 IFNLR1Q8IU57 520 aaPredicted RBP9.08□□□□□ -0.96
RN7SKP40-201ENST00000517211 IFFO2Q5TF58 517 aa9.06□□□□□ -0.96
RN7SKP40-201ENST00000517211 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.05□□□□□ -0.96
RN7SKP40-201ENST00000517211 KDM4FA0A1W2PPD8 638 aa9.05□□□□□ -0.96
RN7SKP40-201ENST00000517211 SPOCK2Q92563 424 aa9.05□□□□□ -0.96
RN7SKP40-201ENST00000517211 ZFP91Q96JP5 570 aaPredicted RBP9.05□□□□□ -0.96
RN7SKP40-201ENST00000517211 FBXO22Q8NEZ5 403 aa9.03□□□□□ -0.96
RN7SKP40-201ENST00000517211 RNF25Q96BH1 459 aaPredicted RBP9.03□□□□□ -0.96
RN7SKP40-201ENST00000517211 SLC34A2O95436 690 aa9.02□□□□□ -0.97
RN7SKP40-201ENST00000517211 STAC3Q96MF2 364 aa9.02□□□□□ -0.97
RN7SKP40-201ENST00000517211 KCNK17Q96T54 332 aa8.99□□□□□ -0.97
RN7SKP40-201ENST00000517211 VPS9D1Q9Y2B5 631 aa8.99□□□□□ -0.97
RN7SKP40-201ENST00000517211 THSD4Q6ZMP0 1018 aa8.98□□□□□ -0.97
RN7SKP40-201ENST00000517211 NLRP6P59044 892 aa8.94□□□□□ -0.98
RN7SKP40-201ENST00000517211 MFRPQ9BY79 579 aa8.93□□□□□ -0.98
RN7SKP40-201ENST00000517211 RIOK3O14730 519 aaKnown RBP8.92□□□□□ -0.98
RN7SKP40-201ENST00000517211 PSDA5PKW4 1024 aaPredicted RBP8.91□□□□□ -0.98
RN7SKP40-201ENST00000517211 BHMG1C9JSJ3 638 aaPredicted RBP8.9□□□□□ -0.98
RN7SKP40-201ENST00000517211 TRAF7Q6Q0C0 670 aa8.9□□□□□ -0.98
RN7SKP40-201ENST00000517211 PPP4R3BQ5MIZ7 849 aa8.89□□□□□ -0.99
RN7SKP40-201ENST00000517211 WNT2BQ93097 391 aa8.89□□□□□ -0.99
RN7SKP40-201ENST00000517211 TMC2Q8TDI7 906 aa8.87□□□□□ -0.99
RN7SKP40-201ENST00000517211 PTCD2Q8WV60 388 aaKnown RBP8.87□□□□□ -0.99
RN7SKP40-201ENST00000517211 VGFO15240 615 aaPredicted RBP8.85□□□□□ -0.99
RN7SKP40-201ENST00000517211 BCL11BQ9C0K0 894 aaPredicted RBP8.84□□□□□ -0.99
RN7SKP40-201ENST00000517211 GFRA3O60609 400 aa8.83□□□□□ -1
RN7SKP40-201ENST00000517211 ZNF775Q96BV0 537 aaPredicted RBP8.82□□□□□ -1
RN7SKP40-201ENST00000517211 GOLGA8CPA6NN73 597 aa8.81□□□□□ -1
RN7SKP40-201ENST00000517211 PPP1R37O75864 691 aa8.81□□□□□ -1
RN7SKP40-201ENST00000517211 ITGBL1O95965 494 aaPredicted RBP8.8□□□□□ -1
RN7SKP40-201ENST00000517211 TRIM41Q8WV44 630 aa8.79□□□□□ -1
RN7SKP40-201ENST00000517211 STK24Q9Y6E0 443 aa8.79□□□□□ -1
RN7SKP40-201ENST00000517211 MRPL50Q8N5N7 158 aaKnown RBP8.78□□□□□ -1
RN7SKP40-201ENST00000517211 ZNF787Q6DD87 383 aa8.77□□□□□ -1.01
RN7SKP40-201ENST00000517211 PLPP6Q8IY26 295 aa8.77□□□□□ -1.01
RN7SKP40-201ENST00000517211 ZBED2Q9BTP6 218 aa8.77□□□□□ -1.01
RN7SKP40-201ENST00000517211 ZNF454Q8N9F8 522 aa8.76□□□□□ -1.01
RN7SKP40-201ENST00000517211 SLC4A5Q9BY07 1137 aa8.76□□□□□ -1.01
RN7SKP40-201ENST00000517211 BCAMP50895 628 aa8.75□□□□□ -1.01
RN7SKP40-201ENST00000517211 KCNH8Q96L42 1107 aa8.75□□□□□ -1.01
RN7SKP40-201ENST00000517211 BCL2L12Q9HB09 334 aa8.73□□□□□ -1.01
RN7SKP40-201ENST00000517211 DSG2Q14126 1118 aa8.71□□□□□ -1.02
RN7SKP40-201ENST00000517211 LAPTM4AQ15012 233 aa8.71□□□□□ -1.02
RN7SKP40-201ENST00000517211 FOXK1P85037 733 aa8.69□□□□□ -1.02
RN7SKP40-201ENST00000517211 KCNC4Q03721 635 aa8.67□□□□□ -1.02
RN7SKP40-201ENST00000517211 UPF1Q92900 1129 aaKnown RBP eCLIP8.67□□□□□ -1.02
RN7SKP40-201ENST00000517211 WBP1LQ9NX94 342 aa8.67□□□□□ -1.02
RN7SKP40-201ENST00000517211 PTPREP23469 700 aa8.66□□□□□ -1.02
RN7SKP40-201ENST00000517211 STK25O00506 426 aa8.65□□□□□ -1.02
RN7SKP40-201ENST00000517211 PROX2Q3B8N5 592 aa8.65□□□□□ -1.02
RN7SKP40-201ENST00000517211 ADAM33Q9BZ11 813 aa8.65□□□□□ -1.02
RN7SKP40-201ENST00000517211 NRG2O14511 850 aaPredicted RBP8.64□□□□□ -1.03
RN7SKP40-201ENST00000517211 TBC1D12O60347 775 aa8.64□□□□□ -1.03
RN7SKP40-201ENST00000517211 FOSBP53539 338 aa8.64□□□□□ -1.03
RN7SKP40-201ENST00000517211 PRKD2Q9BZL6 878 aa8.63□□□□□ -1.03
RN7SKP40-201ENST00000517211 NBPF3Q9H094 633 aa8.63□□□□□ -1.03
RN7SKP40-201ENST00000517211 ANKK1Q8NFD2 765 aa8.62□□□□□ -1.03
RN7SKP40-201ENST00000517211 POTECB2RU33 542 aa8.61□□□□□ -1.03
RN7SKP40-201ENST00000517211 OXER1Q8TDS5 423 aa8.61□□□□□ -1.03
RN7SKP40-201ENST00000517211 GPHNQ9NQX3 736 aaPredicted RBP8.61□□□□□ -1.03
RN7SKP40-201ENST00000517211 SOWAHBA6NEL2 793 aa8.6□□□□□ -1.03
RN7SKP40-201ENST00000517211 COL9A1P20849 921 aa8.57□□□□□ -1.04
RN7SKP40-201ENST00000517211 ZFRQ96KR1 1074 aaKnown RBP8.55□□□□□ -1.04
RN7SKP40-201ENST00000517211 ZDHHC16Q969W1 377 aa8.54□□□□□ -1.04
RN7SKP40-201ENST00000517211 RABGEF1Q9UJ41 708 aa8.54□□□□□ -1.04
RN7SKP40-201ENST00000517211 SEPT9Q9UHD8 586 aaPredicted RBP8.53□□□□□ -1.04
RN7SKP40-201ENST00000517211 PDZRN3Q9UPQ7 1066 aa8.53□□□□□ -1.04
RN7SKP40-201ENST00000517211 KIAA1468Q9P260 1216 aa8.51□□□□□ -1.05
RN7SKP40-201ENST00000517211 LCE2AQ5TA79 106 aaPredicted RBP8.5□□□□□ -1.05
RN7SKP40-201ENST00000517211 PPP1R18Q6NYC8 613 aa8.5□□□□□ -1.05
RN7SKP40-201ENST00000517211 JPH4Q96JJ6 628 aa8.5□□□□□ -1.05
RN7SKP40-201ENST00000517211 ANO8Q9HCE9 1232 aaPredicted RBP8.5□□□□□ -1.05
RN7SKP40-201ENST00000517211 HPS5Q9UPZ3 1129 aa8.48□□□□□ -1.05
RN7SKP40-201ENST00000517211 LOC100996750A0A140TA64 210 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms