RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 RANGAP1P46060 587 aaPredicted RBP4.68□□□□□ -1.66
SCARNA3-201ENST00000517097 CADPS2Q86UW7 1296 aa4.68□□□□□ -1.66
SCARNA3-201ENST00000517097 SLC24A3Q9HC58 644 aa4.68□□□□□ -1.66
SCARNA3-201ENST00000517097 IRX5P78411 483 aaPredicted RBP4.67□□□□□ -1.66
SCARNA3-201ENST00000517097 POTEGQ6S5H5 508 aa4.67□□□□□ -1.66
SCARNA3-201ENST00000517097 UBTFP17480 764 aaKnown RBP4.66□□□□□ -1.66
SCARNA3-201ENST00000517097 PLCG2P16885 1265 aa4.64□□□□□ -1.67
SCARNA3-201ENST00000517097 FAM163AQ96GL9 167 aaPredicted RBP4.64□□□□□ -1.67
SCARNA3-201ENST00000517097 PLSCR2Q9NRY7 297 aa4.64□□□□□ -1.67
SCARNA3-201ENST00000517097 TRIM26Q12899 539 aaPredicted RBP4.63□□□□□ -1.67
SCARNA3-201ENST00000517097 ZNF467Q7Z7K2 595 aaPredicted RBP4.63□□□□□ -1.67
SCARNA3-201ENST00000517097 ARHGEF1Q92888 912 aaKnown RBP4.63□□□□□ -1.67
SCARNA3-201ENST00000517097 OCEL1Q9H607 264 aa4.63□□□□□ -1.67
SCARNA3-201ENST00000517097 TESPA1A2RU30 521 aaPredicted RBP4.62□□□□□ -1.67
SCARNA3-201ENST00000517097 SLAIN1Q8ND83 568 aa4.62□□□□□ -1.67
SCARNA3-201ENST00000517097 ZMYND15Q9H091 742 aa4.62□□□□□ -1.67
SCARNA3-201ENST00000517097 ZMYND10O75800 440 aa4.61□□□□□ -1.67
SCARNA3-201ENST00000517097 PSEN1P49768 467 aa4.61□□□□□ -1.67
SCARNA3-201ENST00000517097 PDCD7Q8N8D1 485 aaKnown RBP4.61□□□□□ -1.67
SCARNA3-201ENST00000517097 SEMA3EO15041 775 aa4.6□□□□□ -1.67
SCARNA3-201ENST00000517097 E2F4Q16254 413 aa4.6□□□□□ -1.67
SCARNA3-201ENST00000517097 RSPH6AQ9H0K4 717 aa4.59□□□□□ -1.67
SCARNA3-201ENST00000517097 HRCP23327 699 aa4.58□□□□□ -1.68
SCARNA3-201ENST00000517097 GOLGA2Q08379 1002 aa4.58□□□□□ -1.68
SCARNA3-201ENST00000517097 MKRN3Q13064 507 aaKnown RBP4.58□□□□□ -1.68
SCARNA3-201ENST00000517097 PDAP1Q13442 181 aaKnown RBP4.58□□□□□ -1.68
SCARNA3-201ENST00000517097 BARGINQ6ZT62 677 aa4.58□□□□□ -1.68
SCARNA3-201ENST00000517097 ST18O60284 1047 aa4.57□□□□□ -1.68
SCARNA3-201ENST00000517097 NPM2Q86SE8 214 aaKnown RBP4.57□□□□□ -1.68
SCARNA3-201ENST00000517097 SMYD5Q6GMV2 418 aa4.56□□□□□ -1.68
SCARNA3-201ENST00000517097 ILDR1Q86SU0 546 aaPredicted RBP4.56□□□□□ -1.68
SCARNA3-201ENST00000517097 IL27Q8NEV9 243 aa4.56□□□□□ -1.68
SCARNA3-201ENST00000517097 MFRPQ9BY79 579 aa4.56□□□□□ -1.68
SCARNA3-201ENST00000517097 GPBP1L1Q9HC44 474 aaPredicted RBP4.56□□□□□ -1.68
SCARNA3-201ENST00000517097 CABP2Q9NPB3 220 aa4.56□□□□□ -1.68
SCARNA3-201ENST00000517097 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.56□□□□□ -1.68
SCARNA3-201ENST00000517097 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.56□□□□□ -1.68
SCARNA3-201ENST00000517097 PCDH10Q9P2E7 1040 aa4.56□□□□□ -1.68
SCARNA3-201ENST00000517097 DPY19L2Q6NUT2 758 aa4.55□□□□□ -1.68
SCARNA3-201ENST00000517097 AK7Q96M32 723 aa4.55□□□□□ -1.68
SCARNA3-201ENST00000517097 PPP1R37O75864 691 aa4.54□□□□□ -1.68
SCARNA3-201ENST00000517097 C3orf67Q6ZVT6 689 aa4.54□□□□□ -1.68
SCARNA3-201ENST00000517097 ARID3AQ99856 593 aa4.54□□□□□ -1.68
SCARNA3-201ENST00000517097 L3MBTL3Q96JM7 780 aaPredicted RBP4.53□□□□□ -1.68
SCARNA3-201ENST00000517097 KDM4CQ9H3R0 1056 aa4.53□□□□□ -1.68
SCARNA3-201ENST00000517097 C1orf115Q9H7X2 142 aa4.53□□□□□ -1.68
SCARNA3-201ENST00000517097 CDAN1Q8IWY9 1227 aa4.52□□□□□ -1.69
SCARNA3-201ENST00000517097 EFCAB3Q8N7B9 438 aa4.51□□□□□ -1.69
SCARNA3-201ENST00000517097 SNPHO15079 494 aa4.5□□□□□ -1.69
SCARNA3-201ENST00000517097 PDE4DQ08499 809 aa4.5□□□□□ -1.69
SCARNA3-201ENST00000517097 KRI1Q8N9T8 703 aaKnown RBP4.5□□□□□ -1.69
SCARNA3-201ENST00000517097 MARVELD3Q96A59 401 aa4.5□□□□□ -1.69
SCARNA3-201ENST00000517097 TMEM121BQ9BXQ6 578 aaPredicted RBP4.5□□□□□ -1.69
SCARNA3-201ENST00000517097 ARIH1Q9Y4X5 557 aaPredicted RBP4.5□□□□□ -1.69
SCARNA3-201ENST00000517097 NCKAP5LQ9HCH0 1330 aa4.49□□□□□ -1.69
SCARNA3-201ENST00000517097 ARID3CA6NKF2 412 aa4.49□□□□□ -1.69
SCARNA3-201ENST00000517097 TRIM66O15016 1216 aa4.49□□□□□ -1.69
SCARNA3-201ENST00000517097 RBM26Q5T8P6 1007 aaKnown RBP4.49□□□□□ -1.69
SCARNA3-201ENST00000517097 GPIHBP1Q8IV16 184 aa4.49□□□□□ -1.69
SCARNA3-201ENST00000517097 FBXO22Q8NEZ5 403 aa4.49□□□□□ -1.69
SCARNA3-201ENST00000517097 LARP6Q9BRS8 491 aaKnown RBP4.49□□□□□ -1.69
SCARNA3-201ENST00000517097 BOLA1Q9Y3E2 137 aa4.49□□□□□ -1.69
SCARNA3-201ENST00000517097 APBB1O00213 710 aa4.48□□□□□ -1.69
SCARNA3-201ENST00000517097 PDE4AP27815 886 aa4.48□□□□□ -1.69
SCARNA3-201ENST00000517097 NLRP6P59044 892 aa4.48□□□□□ -1.69
SCARNA3-201ENST00000517097 MFSD10Q14728 455 aa4.48□□□□□ -1.69
SCARNA3-201ENST00000517097 PHF8Q9UPP1 1060 aa4.47□□□□□ -1.69
SCARNA3-201ENST00000517097 POTEB3A0JP26 581 aa4.46□□□□□ -1.7
SCARNA3-201ENST00000517097 ZBTB7CA1YPR0 619 aa4.46□□□□□ -1.7
SCARNA3-201ENST00000517097 ZNF316A6NFI3 1004 aaPredicted RBP4.46□□□□□ -1.7
SCARNA3-201ENST00000517097 G3V3G9 751 aa4.46□□□□□ -1.7
SCARNA3-201ENST00000517097 SOX12O15370 315 aa4.46□□□□□ -1.7
SCARNA3-201ENST00000517097 PDIA4P13667 645 aaKnown RBP4.46□□□□□ -1.7
SCARNA3-201ENST00000517097 HOXB3P14651 431 aaPredicted RBP4.46□□□□□ -1.7
SCARNA3-201ENST00000517097 MLLT3P42568 568 aaPredicted RBP4.46□□□□□ -1.7
SCARNA3-201ENST00000517097 POTEBQ6S5H4 581 aa4.46□□□□□ -1.7
SCARNA3-201ENST00000517097 MS4A4AQ96JQ5 239 aa4.46□□□□□ -1.7
SCARNA3-201ENST00000517097 FAM117AQ9C073 453 aa4.46□□□□□ -1.7
SCARNA3-201ENST00000517097 CCDC9Q9Y3X0 531 aaKnown RBP4.46□□□□□ -1.7
SCARNA3-201ENST00000517097 EMP3P54852 163 aa4.45□□□□□ -1.7
SCARNA3-201ENST00000517097 FLIIQ13045 1269 aa4.45□□□□□ -1.7
SCARNA3-201ENST00000517097 CAMK2BQ13554 666 aa4.45□□□□□ -1.7
SCARNA3-201ENST00000517097 TMEM92Q6UXU6 159 aa4.45□□□□□ -1.7
SCARNA3-201ENST00000517097 MICALL2Q8IY33 904 aa4.45□□□□□ -1.7
SCARNA3-201ENST00000517097 DDX27Q96GQ7 796 aaKnown RBP4.45□□□□□ -1.7
SCARNA3-201ENST00000517097 CRISPLD2Q9H0B8 497 aa4.45□□□□□ -1.7
SCARNA3-201ENST00000517097 PLEKHG3A1L390 1219 aa4.43□□□□□ -1.7
SCARNA3-201ENST00000517097 FAM205CA6NFA0 338 aa4.43□□□□□ -1.7
SCARNA3-201ENST00000517097 NECTIN2Q92692 538 aa4.43□□□□□ -1.7
SCARNA3-201ENST00000517097 HS3ST6Q96QI5 342 aa4.43□□□□□ -1.7
SCARNA3-201ENST00000517097 SPNS2Q8IVW8 549 aa4.42□□□□□ -1.7
SCARNA3-201ENST00000517097 DDRGK1Q96HY6 314 aa4.42□□□□□ -1.7
SCARNA3-201ENST00000517097 KRTAP3-3Q9BYR6 98 aa4.42□□□□□ -1.7
SCARNA3-201ENST00000517097 KRTAP3-2Q9BYR7 98 aa4.42□□□□□ -1.7
SCARNA3-201ENST00000517097 MMRN1Q13201 1228 aa4.41□□□□□ -1.7
SCARNA3-201ENST00000517097 CCDC82Q8N4S0 544 aa4.41□□□□□ -1.7
SCARNA3-201ENST00000517097 A6NJR5 290 aa4.4□□□□□ -1.71
SCARNA3-201ENST00000517097 GPR37O15354 613 aa4.4□□□□□ -1.71
SCARNA3-201ENST00000517097 ONECUT3O60422 494 aaPredicted RBP4.4□□□□□ -1.71
SCARNA3-201ENST00000517097 HOXB1P14653 301 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms